Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07411 ATGGCAGCACTGATGGTTGCAGGAGCATTTCTTACCCCTGTCATTCAAGTCATTGTTGAAAGTGTTGCCACAAGAGATTACAAAAGCCTCCTCAATAAACGGTTGGTGAATAAACTTATAATTAAATTGAATTCAATCCAGAAAGTGTTGGATGATGCAGAGACAAAGCAGTACCATGACGACAGGGTGAGGTTTTGGCTTGATAATTTAAAGCATGTGGTATATGAAGTAGAACAACTGTTGGATGAGATTGCTACAAATGCACAAAGGAATTCCAAGATTCATCGCTTCCGTTTAGTTGGCCGATTTAAGTCTAAGATCAAGGTTTATTTCTTTCTTTTAGCTGGTCGATTTAGATCTAGGATCAACGATTTGCTAGACAACCTAAAAATTCTTTTAGACGAAAAGGATTTGCTAGGTTTGAAAGAAGGAATATTTGCTCGTAATGAACTTTCAGAAAGAGTGCCAACGATGTCTTTGGTGGATGAGTCTAGCAAATATGGTAGACAGGGTGAAAAAGAGGAAATTATCAGTTTCTTACTTTTAAACAATTGTAGTAGTTGCACCAGCAACCAAGCACCAATAATCAGCATAGTTGGTCTTGGTGGGATAGGTAAGACCACCCTTGCTCAGCTTGTCTACAATGACCGCAGGGTGCAAGAGAACTTTGATCTTAAAGCTTGGGTCTATGTTTCAGAATCATTTGATGTTATTAGACTCACTAAAGCAATTCTCGAGTCATTTGGTTCTTCACCAAACACTGAAAATCTAGATTCACTCCAATGTCAACTGCAGCAGATGATAACAGGAAAGAAATGTTTGCTAGTTCTAGATGATATCTGGAAAGTAAACTGGGAAAGTTGTGAGAAGTTACTAATTTCCTTTAACAAAGGATGTTTTGGAAGTAAGATTATTGTGACAACACGAAATAAGGAGAATGCATTAGCCATGGAATCTGAGTTGTTTGAATTAGATCAATTGGAGGAGAGTGATTCTTGGAGTTTATTTGAGAGACATGCTTTTCCCAACAAAAAAGGGAGTGAATATCCAGATCTTGAGCCAATTGGAAAGAGGATTGTAAGCAAGTGTGGAGGGCTTCCATTAGCCGTGATAACTATGGGGAAACTCTTGAGAGCAAATTTCTCTCAAAGTGAATGGATTGGATTATTGAAGGATGATATGTGGGGTTTATCAGAGAAAGACACTGGCATAAATCCAGTACTGAGATTGGGTTACCATAATCTTCCTTCCAATTTGAAGCCTTGTTTTGCATACTGTTCAATATTTCCCAAGGGTTATGAGTTTGACAAGAACAAATTAATCAAAATGTGGATGGCAAATGGTTTGCTGAATTCCTTCAAACGTGACAAAAGTAAAGAAAAATTGGGTAGTGAACTATTCAATGTTCTTGAGTCAATTTCATTTTTCCAAAAATCACAAGATTTTGATGGTGGTTTTATCATGCATGATCTAGTCAATGACTTGGCAAAATCAGTGTCTCGAGAGTTTTGCTTACAAGTAGAGGATGGTAAAAAGGTAAATCACATATCTAAATGGACACGCCACGTTTGGTTGTCTTTTCATTCGAAAGATGGGGAAAGAGTATTAAAGAAAATTTATAGAAGTAAGGGATTACACAGCTTGGTGGTAGAACGAGAAAGTGGCGAATGGACCAAGAAAAGCATCAATGTGCAATGTGATATATTTTCAAAACTAAAATATTTACGGATGTTGTCATTTCCTGGTCATAAGTATTCATTCAGAGTGCTAGAGCTAGCAGATGAGATAGGCAATTTAAAGTTTTTGCGCTATCTAGACCTGTCTTGGACAAGTATTAAAAGGTTGCCTGATTCTATTTGTAAGCTTTACAATTTAGAGACACTGATATTGGAAGGGTGTTCTAATTTGACTGGATTTCCTTTAGATTTTTACAAACTTGACCGTTTACGCCATCTTAATCTGGAAGGAGCTGCAATAAAGAAGATGCCAAAGAAGATAAGGAAACTAAACCATCTACAAACACTGACAAATTTTGTTGTGGGAGAGTCGAATGGATCTGATATTGAGGAGTTAGAAAGTCTCAATCTTCTTCAAGGAAAACTTTGTCTTTCAGGATTGAACAATGTCACTGATCCAACACATGCCGTAAAGAGCCGTTTGCAAGATAAAAAGTATTTAGAAGAAATACATATGATATTTGATGGTTCATTAATGGAAAGCAATGTGTCTGTCTTGGATGCCCTTCAACCAAATAACAATCTGAAGAGGCTCACTATTCAGAACTACTATGGCAATCATTTTCCAAATTGGCTAAGTGACTGTGATTTACCCAATTTAATATCTCTTAAAGTGGAGAGCTGTCATGTAATAAAGATTGTCGACAATAACTCAACGACTGTCCCGTTCAAGTCCCTTAAAGAGCTTTATATATCTGATTGTCCCATTTTGAAAAGGGCACTGCCTCAACACCTTCCTTCTTTACAGAAATTGGTGATTTATCGTTGCGAAAAGCTAGACGTATCAATTCCCAATTGTGATCATATCATAGACTTAGATCTACAGAATTGTAATCAAATTTTGATAAATGAGTTGCCATCCAGCTTGAAAAGGTTTGTCCTTCATGAAAATCAGTATGTTGAGTTCTCCATGGATCATTTAATCAACAATCCCAATCTGGAAGAGTTGGTGTTGGATTTCAAGGACTTTGTAGAATCTCCCTCATTGGATTTGTGTTGTTATAATTCTCTTAATCGTCTTTCAATAAGAGGATGGCGGTTCTCCTCCTTGCCTCTTTCACTACACTTGTTCACCAATCTTGATTCTCTCATATTGTTAGATTGTCCAAGGCTGGAGTCTTTTCCTATGGGAGGTTTACCTTCCAACTTGAGGTCTCTTGAAATACTTAATTGCCCAAAATTAATTGCTTCTAGAGAGGAGTGGGGTTTGTTCCAACTCAATTCTCTATATAGGTTTAAGGTTAGGGATGATTTTGAAAACGTGGAGTCCTTCCCCGAGCAGAATCTACTGCCACCAACTCTTAAGTATCTTTATTTGAGTTGGTGTTTAAAGCTAAAAAGAATGAACTGCAAGGGATTTCTCCACCTCAAATCTCTACGTAGAATAGATATTATGTACTGCCCTATTCTTGAGAGCTTGCCAGAGGAAAGTCTACCCAGCTCCCTTTCTTGTTTGTTCATTGCATGTTGTCTTTTACTTGAAGAGAAGTACAAAAAGGAGGGAGGACGGCGTTGGCATACAATTAGTCACATCCCTGAAGTGTGGATTGACGGGACTGATCAGCATTACTTGGGTTTGTGA 3318 0.3758 MAALMVAGAFLTPVIQVIVESVATRDYKSLLNKRLVNKLIIKLNSIQKVLDDAETKQYHDDRVRFWLDNLKHVVYEVEQLLDEIATNAQRNSKIHRFRLVGRFKSKIKVYFFLLAGRFRSRINDLLDNLKILLDEKDLLGLKEGIFARNELSERVPTMSLVDESSKYGRQGEKEEIISFLLLNNCSSCTSNQAPIISIVGLGGIGKTTLAQLVYNDRRVQENFDLKAWVYVSESFDVIRLTKAILESFGSSPNTENLDSLQCQLQQMITGKKCLLVLDDIWKVNWESCEKLLISFNKGCFGSKIIVTTRNKENALAMESELFELDQLEESDSWSLFERHAFPNKKGSEYPDLEPIGKRIVSKCGGLPLAVITMGKLLRANFSQSEWIGLLKDDMWGLSEKDTGINPVLRLGYHNLPSNLKPCFAYCSIFPKGYEFDKNKLIKMWMANGLLNSFKRDKSKEKLGSELFNVLESISFFQKSQDFDGGFIMHDLVNDLAKSVSREFCLQVEDGKKVNHISKWTRHVWLSFHSKDGERVLKKIYRSKGLHSLVVERESGEWTKKSINVQCDIFSKLKYLRMLSFPGHKYSFRVLELADEIGNLKFLRYLDLSWTSIKRLPDSICKLYNLETLILEGCSNLTGFPLDFYKLDRLRHLNLEGAAIKKMPKKIRKLNHLQTLTNFVVGESNGSDIEELESLNLLQGKLCLSGLNNVTDPTHAVKSRLQDKKYLEEIHMIFDGSLMESNVSVLDALQPNNNLKRLTIQNYYGNHFPNWLSDCDLPNLISLKVESCHVIKIVDNNSTTVPFKSLKELYISDCPILKRALPQHLPSLQKLVIYRCEKLDVSIPNCDHIIDLDLQNCNQILINELPSSLKRFVLHENQYVEFSMDHLINNPNLEELVLDFKDFVESPSLDLCCYNSLNRLSIRGWRFSSLPLSLHLFTNLDSLILLDCPRLESFPMGGLPSNLRSLEILNCPKLIASREEWGLFQLNSLYRFKVRDDFENVESFPEQNLLPPTLKYLYLSWCLKLKRMNCKGFLHLKSLRRIDIMYCPILESLPEESLPSSLSCLFIACCLLLEEKYKKEGGRRWHTISHIPEVWIDGTDQHYLGL 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07411 1105 PANTHER DISEASE RESISTANCE PROTEIN RP 36 835 IPR044974 GO:0006952
Vivi3g07411 1105 Pfam Rx N-terminal domain 10 93 IPR041118 -
Vivi3g07411 1105 Gene3D - 146 323 IPR027417 -
Vivi3g07411 1105 Gene3D Ribonuclease Inhibitor 885 1078 IPR032675 -
Vivi3g07411 1105 Coils Coil 36 56 - -
Vivi3g07411 1105 Gene3D - 412 499 IPR036388 -
Vivi3g07411 1105 SUPERFAMILY RNI-like 776 1073 - -
Vivi3g07411 1105 Gene3D - 326 411 IPR042197 -
Vivi3g07411 1105 Gene3D - 19 119 - -
Vivi3g07411 1105 PRINTS Disease resistance protein signature 363 377 - -
Vivi3g07411 1105 PRINTS Disease resistance protein signature 620 636 - -
Vivi3g07411 1105 PRINTS Disease resistance protein signature 195 210 - -
Vivi3g07411 1105 PRINTS Disease resistance protein signature 267 281 - -
Vivi3g07411 1105 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 426 IPR027417 -
Vivi3g07411 1105 Pfam NB-ARC domain 190 389 IPR002182 GO:0043531
Vivi3g07411 1105 Gene3D Ribonuclease Inhibitor 536 884 IPR032675 -
Vivi3g07411 1105 SUPERFAMILY L domain-like 488 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07411 Vivi-Chr3 205322572 205347777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07411 589 675 WRKY Transcription Factor Family AT4G12020 40.909 7.34e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07411 - - vvo:131593170 1297.34