Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07380 ATGGGATCTAACTATGAAGATATTCATGATCTTCCAATATGTTCACCACTTGAAGCAGTGAATGTTGATGATGATGATGATGATGATGATGATGCATGTCTCTCTGCTATGCTTCTTTGTTGTGGTCCAATGATTTTTACTTCAGTATTGAAAGCTTCAATCGAACTAAACTTGTTTGAGATCATTTATAAGGCAAATCCACCATGTGTTTCAGCATCTTATGTTGCTTCAAAGCTACAACAAACAACACAACAACATCCTCAACTTCCTCGAAGACTTGACCGAATGCTGTGTCTTCTTGCAAGCCATGATCTTCTTGTTTGTTCCACAAGGACAAATGATGAAGGTGGGAGTGAAAGAGTTTATGAATTGTCTTTGGCTGGTAAATACTTTGTCAATGATGAGAAGAATGGGTCTGTTGCTTTGTTCTCAACATTCATGAATCACCCGAAATTAATCGATGCATTCACCAATGTTAAGGAGGTACTGTCAGATTGTGATAAAGGACTATACATGAAAGTTCATGGAATGGCTGTTTATGAAGGAATACAATCTGATCCAGCTTGGAATCATGTGTTTAATAGAGCAATGGGTGATATTTGCACAATAGAAATGAAGAAGATATTGGAGAAATACAAAGGGTTTGAAGGAATATCATTGTTGGTTGATGTTGGAGGAGGAATTGGGCAAAGTTTGAATATGATTATATCTAAGTATCCTTCTATAAAAGGCATTAATTTTGATTTGCCTCAAGTAATACATCATGCTCCAATTTATCAAGGGATTGAGCATGTTGAAGGAGACATGTTTAATAGTGTCCCAAAAGGTGATGTCATATTATTGAAGGCTATACTACACAACTGGTCTGATGAAAACTGTCTCAAAGTTCTAAGTAAGTGCTACAATGCTTTGCCACAACATGGTAAAGTGATTGTTGTGGACTTCATAATGCCTCAAGAAATTCAGCATACAAAAGCAGATAAAATGATTACTAGCTTTGATAATCTCATGTTTCTAGATGGTGGTGTTGAAAGAACAGAGAAAGAATTTGAAAAGCTATGCAAATTCTCTGGCTTTTCTAGTTTTCATGTTGTTTGTCTTGCTTTCTCTGCCCTAGGAGTGATGGAATTTTATAAATAA 1140 0.3588 MGSNYEDIHDLPICSPLEAVNVDDDDDDDDDACLSAMLLCCGPMIFTSVLKASIELNLFEIIYKANPPCVSASYVASKLQQTTQQHPQLPRRLDRMLCLLASHDLLVCSTRTNDEGGSERVYELSLAGKYFVNDEKNGSVALFSTFMNHPKLIDAFTNVKEVLSDCDKGLYMKVHGMAVYEGIQSDPAWNHVFNRAMGDICTIEMKKILEKYKGFEGISLLVDVGGGIGQSLNMIISKYPSIKGINFDLPQVIHHAPIYQGIEHVEGDMFNSVPKGDVILLKAILHNWSDENCLKVLSKCYNALPQHGKVIVVDFIMPQEIQHTKADKMITSFDNLMFLDGGVERTEKEFEKLCKFSGFSSFHVVCLAFSALGVMEFYK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07380 379 FunFam Caffeic acid 3-O-methyltransferase 17 131 - -
Vivi3g07380 379 Pfam Dimerisation domain 49 101 IPR012967 GO:0046983
Vivi3g07380 379 SUPERFAMILY "Winged helix" DNA-binding domain 27 134 IPR036390 -
Vivi3g07380 379 Gene3D Vaccinia Virus protein VP39 190 367 IPR029063 -
Vivi3g07380 379 PIRSF O-mtase 16 379 IPR016461 GO:0008168
Vivi3g07380 379 PANTHER O-METHYLTRANSFERASE 46 369 IPR016461 GO:0008168
Vivi3g07380 379 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 38 379 IPR016461 GO:0008168
Vivi3g07380 379 Pfam O-methyltransferase domain 167 360 IPR001077 GO:0008171
Vivi3g07380 379 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 138 377 IPR029063 -
Vivi3g07380 379 Gene3D - 45 208 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07380 Vivi-Chr3 204384792 204387879 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07380 29 379 Monolignol Biosynthesis Gene Families AT5G54160 46.479 1.12e-96 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07380 - - mtr:11418328 638.262