Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07369 ATGGAGTACCATAGTAACGTGCTAATGCTTATGGTGTGTGCTTTCTTCTTTTTCTCCATTCCCGTTTTCTCTAAACGGAACGCATTTACTACTATTGCTCCAAATCAGTTTATCCAATATAGTGATACACTTGTTTCTGCAGCTGGAACCTTTGAAGCAGGATTTTTCAACTTTGGAGATTCACAACGCCAATACTTTGGTATATGGTACAAGAGCATATCACCTAGGACTATTGTGTGGGTTGCCAATAGAGACACCCCTGTACAAAACTCAACGGGATTGCTGAAACTCAATGATCAGGGAAGTCTTGTTATTCTTGATGGCTCGAAAGGCGTTGTCTGGTCTTCAAATTTATCGAGAATTGTGGTGAAGCCAGCTGTTGTGCAGTTGTTGGATTCAGGAAACCTTGTTGTGAAAGATGCAAATAGCAGCAGTGAGAATGATGATTTGTCGTGGGAAAGTTTTGATTATCCCGGTAACACTTTCCTTCCTGGAATGAAGCTGAAAAGTAATTTAGTTGCTGGTCCATATAGATATCTCACATCTTGGAGAAACCCTGAAGATCCTGCTGAAGGTGAGTGTTCATATAGGATAGATACACATGGTTTACCTCAATTGGTTAATGCAAAGGGAGCAAGATTTCTGTATAGAGGAGGCTCATGGAATGGATTTCTTTTCACTGGTGTTCCTTGGCAAAGAATGCGTAGAGTCTTGAATTTCTCAGTAGTGTTCACTGACAAAGAATTCTCTTATCAATATGAAACTATTAACAGTTCAACTATTACTAGATTGGTGCTCGATTCATATGGAAATTCACAACGTCTTATATGGTCAGATAGGACACAAATTTGGGAGGCTATATCTTCTCGTCCGATAGACCAATGTGATAATTATGTCTTGTGTGGTATCAACTCTAACTGCAATATTAATGACTTTCCAATATGTGAATGCTTGGAGGGTTTCATGCCAAAATTTAAATTGAAGTGGGAGTCATCGGATTGGTCTGATGGGTGTGTAAGGAAAACACATTTAAATTGTATCCATGGAGATGAATTTTTGAAGTACACAAACATGAAATTGCCAGATACATCATCATCATGGTTTGACAAGAGCTTGAGCCTTGAGGAATGCAAGACTGTGTGTTTGAAAAACTGTTCTTGTACTGCGTATGCAAATTTGGATATCAGATATGGTGGTAGTGGCTGCTTACTTTGGTTTGACAACATTGTCGACATGAGAGGACATCCAGACCAAGGACAAGATATTTACATACGACTAGCATCTTCAGAATTTGATCATAAAAAGAAAAAGAGGAACTTGAAGCGTGCTGGAACTCTTGCAGGAATTATTGCATTCATTATAGGACTTACCGTTATTATATTGGTCACATCAACATCTAGAAAGAAGCTTGGGTGTATAAAAATGTTATTTCACAAGAAGGAGACGGGGGATGGTGAGCTGGCAACAATATTTGATTTTTCAACCATAACTAATGCAACAAATCACTTCTCTAACCGAAACAAGTTAGGAGAAGGAGGTTTTGGACCAGTGTACAAGGGCATAATGGTAGATGGCCAAGAGATTGCTGTTAAGAGGCTATCTGAAACATCAAGACAAGGTACTGAGGAATTTAAAAATGAAGTAAAATTGATGGCAACGCTGCAACACCGAAATCTTGTAAAACTTCTTGGTTGCTCTATCCAACATGATGAAAAGTTGTTGATCTACGAGTTCATGCCCAACAGAAGCTTGAAATACTTTATTTTTGATTCTACGCGAAGTAAATTACTAGAATGGATAAAGCGCTTGGAAATTATTGACGGGATTGCTCGGGGGCTGCTGTATCTCCATCAGGATTCTACGCTTAGAATCATACATAGAGATCTCAAAACTAGCAACATTCTTCTTGATATTGATATGACCCCAAAGATATCAGATTTTGGTTTAGCCAGATCATTCATGGGAGATCAAGCCGAGGCTTATACAAATAGAGTGATGGGAACATATGGATATATGCCTCCAGAATATGCAGTGCATGGATCCTTCTCAATAAAATCTGATGTTTTTAGCTTTGGAGTTGTGGTACTTGAGATAATTAGCAGCAAGAAGAACCGCGGATTTTGTGACCCTCTACATCATCTAAACCTTCTTGGTCATGCATGGAGACTATGGAGTGAAGATAGGCCACTGGAGTTGATGGATGAAGTATTATCTGATGCAGCCATATGTTCGGAAATCATAAGATTTATTCATGTGGCCCTATTGTGTGTACAACAGAAACCAGAAAATAGGCCTAACATGTCATCTGTGGTTTTTATGTTAAAGGGTGGAACGTTACTCCCGAAACCAAGTAAACCCGGGTTCTATGCAGGAAGAGATTTTACAAGTAGCACGGAATCTTCTTCAAAGGAGGGTTCAATAAATGAAGCTTCAATCTCATTGTTAGAGGCCAGATAG 2457 0.3907 MEYHSNVLMLMVCAFFFFSIPVFSKRNAFTTIAPNQFIQYSDTLVSAAGTFEAGFFNFGDSQRQYFGIWYKSISPRTIVWVANRDTPVQNSTGLLKLNDQGSLVILDGSKGVVWSSNLSRIVVKPAVVQLLDSGNLVVKDANSSSENDDLSWESFDYPGNTFLPGMKLKSNLVAGPYRYLTSWRNPEDPAEGECSYRIDTHGLPQLVNAKGARFLYRGGSWNGFLFTGVPWQRMRRVLNFSVVFTDKEFSYQYETINSSTITRLVLDSYGNSQRLIWSDRTQIWEAISSRPIDQCDNYVLCGINSNCNINDFPICECLEGFMPKFKLKWESSDWSDGCVRKTHLNCIHGDEFLKYTNMKLPDTSSSWFDKSLSLEECKTVCLKNCSCTAYANLDIRYGGSGCLLWFDNIVDMRGHPDQGQDIYIRLASSEFDHKKKKRNLKRAGTLAGIIAFIIGLTVIILVTSTSRKKLGCIKMLFHKKETGDGELATIFDFSTITNATNHFSNRNKLGEGGFGPVYKGIMVDGQEIAVKRLSETSRQGTEEFKNEVKLMATLQHRNLVKLLGCSIQHDEKLLIYEFMPNRSLKYFIFDSTRSKLLEWIKRLEIIDGIARGLLYLHQDSTLRIIHRDLKTSNILLDIDMTPKISDFGLARSFMGDQAEAYTNRVMGTYGYMPPEYAVHGSFSIKSDVFSFGVVVLEIISSKKNRGFCDPLHHLNLLGHAWRLWSEDRPLELMDEVLSDAAICSEIIRFIHVALLCVQQKPENRPNMSSVVFMLKGGTLLPKPSKPGFYAGRDFTSSTESSSKEGSINEASISLLEAR 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07369 818 Gene3D - 25 155 IPR036426 -
Vivi3g07369 818 MobiDBLite consensus disorder prediction 791 809 - -
Vivi3g07369 818 CDD B_lectin 43 158 IPR001480 -
Vivi3g07369 818 SMART serkin_6 503 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07369 818 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 765 - -
Vivi3g07369 818 CDD STKc_IRAK 509 776 - -
Vivi3g07369 818 MobiDBLite consensus disorder prediction 791 818 - -
Vivi3g07369 818 ProSiteProfiles PAN/Apple domain profile. 346 427 IPR003609 -
Vivi3g07369 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 781 - -
Vivi3g07369 818 Gene3D Hepatocyte Growth Factor 344 428 - -
Vivi3g07369 818 PIRSF SRK 1 818 IPR024171 GO:0004674
Vivi3g07369 818 SMART ntp_6 347 426 IPR003609 -
Vivi3g07369 818 ProSiteProfiles Protein kinase domain profile. 503 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07369 818 Pfam D-mannose binding lectin 77 184 IPR001480 -
Vivi3g07369 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 189 IPR036426 -
Vivi3g07369 818 SUPERFAMILY Protein kinase-like (PK-like) 489 774 IPR011009 -
Vivi3g07369 818 ProSiteProfiles Bulb-type lectin domain profile. 29 151 IPR001480 -
Vivi3g07369 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 345 426 - -
Vivi3g07369 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Vivi3g07369 818 Pfam S-locus glycoprotein domain 216 325 IPR000858 GO:0048544
Vivi3g07369 818 Gene3D Transferase(Phosphotransferase) domain 1 579 779 - -
Vivi3g07369 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 155 - -
Vivi3g07369 818 SMART blect_4 35 158 IPR001480 -
Vivi3g07369 818 Pfam PAN-like domain 346 412 IPR003609 -
Vivi3g07369 818 Gene3D Phosphorylase Kinase; domain 1 477 578 - -
Vivi3g07369 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 470 578 - -
Vivi3g07369 818 CDD PAN_AP_plant 342 427 - -
Vivi3g07369 818 Pfam Protein tyrosine and serine/threonine kinase 506 772 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07369 Vivi-Chr3 204200640 204203814 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07369 491 788 Receptor kinase-like Gene Family AT4G23230 57.525 1.15e-116 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi3g07369 PK_Tyr_Ser-Thr 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07369 - - vvo:131659752 1355.5