Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07360 ATGCCTCCAGAATATGCAGTTCATGGATCTTTCTCAATAAAATCAGATGTTTTTAGCTTTGGAGTCGTAGTACTTGAGATAATTAGCAATAAGAAGAATCGTGGATTTTGTGACCCTCTACATGATCTAAACCTTCTTGGTCATGCATGGAGACTATGGATTGAAGATAGGCCACTGGAGTTGATGGATGAAATATTACATGATGCAGCCATATGTTCAGAAATAATAAAATTTATTCATGTGGCTCTACTGTGTGTACAACAGAAACCAGAAAATAGGCCTAACATGTCGTCGGTAGTTTTTATGATAAAGGGTGGAAAGTTACTCTCGAAACCATGTAAACCCGGGTTCGAAGAGATTTTATAA 366 0.3716 MPPEYAVHGSFSIKSDVFSFGVVVLEIISNKKNRGFCDPLHDLNLLGHAWRLWIEDRPLELMDEILHDAAICSEIIKFIHVALLCVQQKPENRPNMSSVVFMIKGGKLLSKPCKPGFEEIL 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07360 121 Pfam Protein tyrosine and serine/threonine kinase 1 100 IPR001245 GO:0004672|GO:0006468
Vivi3g07360 121 Gene3D Transferase(Phosphotransferase) domain 1 1 111 - -
Vivi3g07360 121 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 116 - -
Vivi3g07360 121 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07360 121 SUPERFAMILY Protein kinase-like (PK-like) 1 102 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07360 Vivi-Chr3 204068425 204069907 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07360 1 117 Receptor kinase-like Gene Family AT4G23230 50.833 6.98e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi3g07360 PK_Tyr_Ser-Thr 4.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07360 - - vvo:131657165 252.292