Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07356 ATGGAGAACATCCATAAGGTGTTATTGGTAATGCTAATCTTCTTTTGCTCCACCATACCCACTTTCTCTAATCAGAACACTCTCGCTCCAAATCAGTTTATCCGACATCATGAAACACTTGTTTCTGCAGCTGGAACCTTTGAAGCAGGATTTTTCAATTTTGGAGATCCACAACGCCAATACTTTGGTATATGGTACAAAAGCATATCACCTAGGACTGTTGTGTGGGTTGCCAATAGAGAGACCCCTGTACAAAACTCAACAGGATTGCTGAAACTCAATGATCAGGGAAATCTAGTTATTCTTGATGACTCGAAAGGCGTTGTTTGGTCTTCCAATTCATCGAGAGTTGTGGTGAAACCAGCTGCACTGCAGTTGTTGGATTCAGGAAACCTTGTTGTGAAAGATGCAAACAGCACTATGAACTTTTTTTGGGAAAGTTTTGATTATCCTGGTAACACTTTTCTTGATGGAATGAAGCTGAAAAGTAATTTAGTAACTGGTCCATATAGATATCTCACATCTTGGAAAAGCCCTGAAGATCCTGCTGAAGGTGAATGCTCATATAGGATAGATACGCATGGTTTTCCTCAACTGGTTACTGCAAAAGGAGCAACATTTCTTTATAGAGCAGGGTCATGGAATGGGTATCTTTTCACTGGTGTTTCTTGGCAAAGAATGTATAGAGTCTTGAATTTCTCAGCAGTGTTCACTGACAAAGAAATCTCTTATCAATATGAAGCTATGAACAGTTCAATTATTACTAGAATGGTGTTAGATCCTTCCGGAAATTCACAGCGTCTTCTTTGGTCCATTAAGTCACAAGTTTGGGAGGCTATAGCCAGTCGTCCTGCAGACCAGTGTGATAATTATGCCTTGTGTGGTATCAACTCTAACTGCAATATTAATGACTTTCCAATATGTGAATGCTTGGAGGGTTTCATGCCAAAATTTAAATCGAAGTGGGAGTCATCAGTTTGGTCAGATGGGTGTGTAAGGAAAACACCTTTAAGTTGTCTCCGTGGAGATGGATTTTTGAAGTACACAAGCATGAAGTTGCCAGATACGTCATCATCGTGGTTTGACAAGAGCATGAGCCTTGAGGCATGCAACACTGCGTGTTTGAAAAACTGTTCTTGCACTGCATATGCAAATTTGGATATCAGATATGGTGGTAGTGGCTGCTTACTTTGGTTTGACAACATTGTGGACATGAGAGTACATCCCGACCAAGGACAAGACATTTACATAAGACTCGCATCTTCAGAATTTGATCATAAAAAGAATAAGAGGAACTTGAAGCGTACTAGGACTCTTGCAGGAATTATTGCATTCATTATAGGACTAACCATTATTGTATTGGTCACATCAGCATATAAAAAGAAGCTTGGATGCATAAAAGTGTTATTTCACAAGAAGGAAAAGGAAGATGTTGACTTGGCAACAATATTTGACTTTTCAACCATCGCTAATGCAACAAATCACTTTTCTAACAGAAACAAGTTAGGAGAAGGTGGTTTTGGACCAGTGTACAAGGGCATACTGGTTGATGGCCACGAGATTGCTGTTAAGAGGCTTTCTAAAACATCAGGACAAGGAACTCGGGAGTTCAAAAATGAAGTACAATTGATGGCAACACTTCAACACCGTAATCTTGTAAAACTTCTTGGTTGTTCTATTCAACACGATGAAAAGTTGTTGATCTACGAATTCATGCCCAACAGAAGCTTGGATTACTTTATTTTTGATACTACTCGAAGAAAATTACTAGATTGGAGAAAGCGCTTGGAAATTATTGATGGGATTGCTCGGGGGCTGCTGTATCTCCATCAGGATTCTACACTGAGGATCATACATAGAGATCTTAAGACAAGCAATATTCTTCTTGATATTGATATGATCCCAAAGATCTCAGATTTTGGTCTAGCCAGATCATTTCTGGGAGACCAAGCTGAGGCTAATACAAATAGAGTGATGGGAACATATGGATATATGCCTCCAGAATATGCAGTTCATGGATCTTTCTCAATAAAATCTGATGTTTTTAGCTTTGGAGTCGTTGTACTTGAGATAATTAGTGGTAAGAAAAACAGCGGATTTGGTGATCCTCGACATCGTCTAAACCTTCTTGGGCACGCATGGAGACTATGGATTGAAGAAAGGCCACATGAGTTAATAGCTGATATATCACATGACGCATCTATATATTCAGAAAGAGAAATGCTATTCATACATGTAGGATTTAGGTGTATGAATAGCATTTCTCTACCCGAAAATAGGCCTAACATGTCATCGGTAGTTTTTATGTTAAAAGGTGAAAAGTTACTCCCCAAACCAAGTGAGCCCGGGTTCTATGCAGGAAGAGATAATACAAATAACACAGGATCTTCTTCAAAGGGTTGTTCAATAAACGATGCTTCGATGTCATTGTTAGAGGGTCGATAG 2445 0.3922 MENIHKVLLVMLIFFCSTIPTFSNQNTLAPNQFIRHHETLVSAAGTFEAGFFNFGDPQRQYFGIWYKSISPRTVVWVANRETPVQNSTGLLKLNDQGNLVILDDSKGVVWSSNSSRVVVKPAALQLLDSGNLVVKDANSTMNFFWESFDYPGNTFLDGMKLKSNLVTGPYRYLTSWKSPEDPAEGECSYRIDTHGFPQLVTAKGATFLYRAGSWNGYLFTGVSWQRMYRVLNFSAVFTDKEISYQYEAMNSSIITRMVLDPSGNSQRLLWSIKSQVWEAIASRPADQCDNYALCGINSNCNINDFPICECLEGFMPKFKSKWESSVWSDGCVRKTPLSCLRGDGFLKYTSMKLPDTSSSWFDKSMSLEACNTACLKNCSCTAYANLDIRYGGSGCLLWFDNIVDMRVHPDQGQDIYIRLASSEFDHKKNKRNLKRTRTLAGIIAFIIGLTIIVLVTSAYKKKLGCIKVLFHKKEKEDVDLATIFDFSTIANATNHFSNRNKLGEGGFGPVYKGILVDGHEIAVKRLSKTSGQGTREFKNEVQLMATLQHRNLVKLLGCSIQHDEKLLIYEFMPNRSLDYFIFDTTRRKLLDWRKRLEIIDGIARGLLYLHQDSTLRIIHRDLKTSNILLDIDMIPKISDFGLARSFLGDQAEANTNRVMGTYGYMPPEYAVHGSFSIKSDVFSFGVVVLEIISGKKNSGFGDPRHRLNLLGHAWRLWIEERPHELIADISHDASIYSEREMLFIHVGFRCMNSISLPENRPNMSSVVFMLKGEKLLPKPSEPGFYAGRDNTNNTGSSSKGCSINDASMSLLEGR 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07356 814 Gene3D Hepatocyte Growth Factor 337 422 - -
Vivi3g07356 814 CDD B_lectin 31 151 IPR001480 -
Vivi3g07356 814 CDD PAN_AP_plant 335 420 - -
Vivi3g07356 814 Pfam D-mannose binding lectin 73 177 IPR001480 -
Vivi3g07356 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 572 778 - -
Vivi3g07356 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Vivi3g07356 814 SMART blect_4 31 151 IPR001480 -
Vivi3g07356 814 Gene3D - 21 148 IPR036426 -
Vivi3g07356 814 PIRSF SRK 1 814 IPR024171 GO:0004674
Vivi3g07356 814 SMART ntp_6 340 419 IPR003609 -
Vivi3g07356 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 148 - -
Vivi3g07356 814 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Vivi3g07356 814 SUPERFAMILY Protein kinase-like (PK-like) 480 770 IPR011009 -
Vivi3g07356 814 MobiDBLite consensus disorder prediction 786 805 - -
Vivi3g07356 814 MobiDBLite consensus disorder prediction 781 814 - -
Vivi3g07356 814 Gene3D Transferase(Phosphotransferase) domain 1 572 777 - -
Vivi3g07356 814 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 752 - -
Vivi3g07356 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 338 419 - -
Vivi3g07356 814 CDD STKc_IRAK 502 772 - -
Vivi3g07356 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Vivi3g07356 814 Gene3D Phosphorylase Kinase; domain 1 469 571 - -
Vivi3g07356 814 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Vivi3g07356 814 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Vivi3g07356 814 Pfam PAN-like domain 339 405 IPR003609 -
Vivi3g07356 814 Pfam Protein tyrosine and serine/threonine kinase 499 696 IPR001245 GO:0004672|GO:0006468
Vivi3g07356 814 SMART serkin_6 496 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07356 814 ProSiteProfiles Protein kinase domain profile. 496 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07356 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 461 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07356 Vivi-Chr3 203989702 203994387 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07356 473 785 Receptor kinase-like Gene Family AT4G11480 54.489 3.45e-111 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi3g07356 PK_Tyr_Ser-Thr 6.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07356 - - vvo:131659752 1321.61