Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07351 ATGAAGAACAACCATAAGGTGCTAATGCTAATGGTGTGTACTTTCTTCTTTTGCTCCATTATGCCAACTTTCTCTAAACAAAACACCTTTACTACTATTGCTCAAAATCAGTTTATCCAATACAGTGACACACTTGTTTCTGCAGCAGGAACCTTTGAAGCAGGCTTTTTTAATTTTGGAGATCCGCAACGCCAATACTTCGGTATATGGTACAAAAGCATATCACCTAGGGCTATTGTGTGGGTTGCCAATAGAAATACACCTGTACAAAACTCAACAGGATTGCTGAAACTCAATGATCAGGGAAGTCTTGTTATTCTTGATGGCCCGAAAGGCGTTGTCTGGTCTTCAAATTTATCGAGAATTGTGGTGAAACGAGCTGTTGTGCAGTTGTTGGATTCAGGAAACCTTATTGTGAAAGACGCGAACAGCAGCGTTAAGAATAAGGATTTCGTTTGGGAGAGTTTTGATTATCCCGGTAACACTTTCCTTGCGGGAATGAAGCTGAAGAGTAATTTAGTTACCGGTCCGTATAGATATATCAGATCATGGAAAAGTCCTGATGATCCTTCGGACGGTGAGTTTTCGTATCAGATAGATACGCGTGGTTTTCCACAGCTGGTTACTGCAAAGGGAGGAAGTTTACTCTATAGATCAGGCTCATGGAATGGTTTTCTTTTCACTGGAATTTCGTGGCCAATGCATAGAATCTATAATCTCTTTTTTGTGTTCGACGACAAGGAAGTCTCTTATCGATATGAAACTTTGAACCGTTCGATTATTTCTAGAACGGTGTTAGATCCATATGGAACTTCGCAGCGCTTTATATGGTCTGATGAGTCACAGGTTTGGAAGGCGACAGTTACTCGTCCTGTAGACCAGTGTGATGATTATGCCTTGTGTGGTATCAACTCTAACTGCAATATTAATGACATCCAAATGTGTGAATGCTTGGATGGTTTTACACCGAAATTTCAAGCGAAATGGGACTCGTCCGATTGGTCTGGCGGGTGTGTAAGGAGAACGAAACTGAATTGTCTCAACGGAGATGGATTTTTGAAGTACACAAACATGAAACTGCCTGACACTTCATCGTCGTGGTTTAACAGAAGCTTGAGCCTTGACGAATGTAAGACAGTGTGTTTGAAAAACTGTTCTTGCGTTGCATACGCAAATTTAGATATCAGAAATGGTGGAAGTGGCTGCTTACTTTGGTTTCATAGTATTGTCGACATGAGAAAACACTTAGATCGAGGACAAGATATTTACATACGACTCGCATTTTCTGAACTAGATCATACAAAGAATAAGATGAACTTAGGTACGAAGCTTGCTGCGATTTTCTTAGGGGTTATGGCATTCATCATAGGACTTACAGTTCTTCTATTGGTGACATCAACATTTAGGAAGAAGCTTGGGTGTATAAAAAAGTTGATTCCATGGAACCACAAGAAGGAGAAGAAAGAGGATGATTTTCCAACAGTCTTTGATTTTTCAACCATCATTAATGTCACGGATAACTTCTCTTACCAAAACAAGTTAGGAGAAGGTGGCTTTGGACCGGTATACAAGGGCGTATTGGCAGATGGACAAGAGATTGCTGTTAAGAGGCTTGCGGAAACATCAGGACAAGGAACTAAGGAGTTCAAGAATGAAGTGAAGTTAATGGCAACACTTCAACACCGTAATCTTGTAAAACTTCTTGGTTGTTCTATTCATCAAGATGAAAAATTGTTGATCTATGAATTCATGCCCAACAGAAGCTTGGATTACTTTATTTTTGATACATCGCGAAGTAAGTTACTAGATTGGAGAAAGCGCTTGGAAATTATCGATGGGATTGCTCGGGGGTTGTTGTACCTCCACCAAGATTCTACGTTAAGAATCATACATAGAGATCTCAAGACAAGCAATATTCTTCTTGATATTGATATGATCCCAAAGATATCCGATTTTGGTTTAGCCAGATCATTTATGGGAGACCATGCCGAGGCTAACACAAATAGAGTGATGGGAACATACGGATATATGCCTCCAGAATATGCAGTGCATGGATATTTCTCAACAAAGTCGGATGTTTTTAGCTTTGGAGTCGTTGTGCTTGAGATAATTAGTGGTAGGAAGAATCGCGGGTTTTGTGACCCTCAACATCATCTAAACCTTCTTGGTCATGCATGGAGACTATGGATTGAAGAAAGGCCAGAGGAGCTAATGGCTGACACATTATATGATGAGGCCATAAGTTCAGAAATATTAAGATTTATTCATGTGGGACTATTGTGTGTACAACGGAAACCGGAAAATAGGCCTAACATGTCATCTGTGATTTTTATGTTAAAGGGTGAAAAGTTACTCCCGAAACCATGTGAACCCGGGTTCTACGATGGAAGAGATTATACAAATAGCACAGGATCTACTTCAAAGGGGTGTTCGATAAATGAAGCTTCAATCTCATTGTTAGAAGCTCGATAG 2472 0.4005 MKNNHKVLMLMVCTFFFCSIMPTFSKQNTFTTIAQNQFIQYSDTLVSAAGTFEAGFFNFGDPQRQYFGIWYKSISPRAIVWVANRNTPVQNSTGLLKLNDQGSLVILDGPKGVVWSSNLSRIVVKRAVVQLLDSGNLIVKDANSSVKNKDFVWESFDYPGNTFLAGMKLKSNLVTGPYRYIRSWKSPDDPSDGEFSYQIDTRGFPQLVTAKGGSLLYRSGSWNGFLFTGISWPMHRIYNLFFVFDDKEVSYRYETLNRSIISRTVLDPYGTSQRFIWSDESQVWKATVTRPVDQCDDYALCGINSNCNINDIQMCECLDGFTPKFQAKWDSSDWSGGCVRRTKLNCLNGDGFLKYTNMKLPDTSSSWFNRSLSLDECKTVCLKNCSCVAYANLDIRNGGSGCLLWFHSIVDMRKHLDRGQDIYIRLAFSELDHTKNKMNLGTKLAAIFLGVMAFIIGLTVLLLVTSTFRKKLGCIKKLIPWNHKKEKKEDDFPTVFDFSTIINVTDNFSYQNKLGEGGFGPVYKGVLADGQEIAVKRLAETSGQGTKEFKNEVKLMATLQHRNLVKLLGCSIHQDEKLLIYEFMPNRSLDYFIFDTSRSKLLDWRKRLEIIDGIARGLLYLHQDSTLRIIHRDLKTSNILLDIDMIPKISDFGLARSFMGDHAEANTNRVMGTYGYMPPEYAVHGYFSTKSDVFSFGVVVLEIISGRKNRGFCDPQHHLNLLGHAWRLWIEERPEELMADTLYDEAISSEILRFIHVGLLCVQRKPENRPNMSSVIFMLKGEKLLPKPCEPGFYDGRDYTNSTGSTSKGCSINEASISLLEAR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07351 823 PIRSF SRK 2 823 IPR024171 GO:0004674
Vivi3g07351 823 SMART ntp_6 347 426 IPR003609 -
Vivi3g07351 823 Gene3D - 25 157 IPR036426 -
Vivi3g07351 823 Pfam PAN-like domain 346 412 IPR003609 -
Vivi3g07351 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 584 787 - -
Vivi3g07351 823 Pfam S-locus glycoprotein domain 217 325 IPR000858 GO:0048544
Vivi3g07351 823 CDD B_lectin 44 159 IPR001480 -
Vivi3g07351 823 SMART blect_4 36 159 IPR001480 -
Vivi3g07351 823 ProSiteProfiles Bulb-type lectin domain profile. 30 152 IPR001480 -
Vivi3g07351 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 190 IPR036426 -
Vivi3g07351 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 475 583 - -
Vivi3g07351 823 Pfam Protein tyrosine and serine/threonine kinase 510 776 IPR001245 GO:0004672|GO:0006468
Vivi3g07351 823 SUPERFAMILY Protein kinase-like (PK-like) 491 779 IPR011009 -
Vivi3g07351 823 Pfam D-mannose binding lectin 79 185 IPR001480 -
Vivi3g07351 823 Gene3D Hepatocyte Growth Factor 343 425 - -
Vivi3g07351 823 Gene3D Transferase(Phosphotransferase) domain 1 584 785 - -
Vivi3g07351 823 ProSiteProfiles PAN/Apple domain profile. 346 427 IPR003609 -
Vivi3g07351 823 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 769 - -
Vivi3g07351 823 CDD STKc_IRAK 514 781 - -
Vivi3g07351 823 CDD PAN_AP_plant 342 427 - -
Vivi3g07351 823 ProSiteProfiles Protein kinase domain profile. 508 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07351 823 SMART serkin_6 508 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07351 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 156 - -
Vivi3g07351 823 Gene3D Phosphorylase Kinase; domain 1 475 583 - -
Vivi3g07351 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 345 426 - -
Vivi3g07351 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07351 Vivi-Chr3 203917985 203921568 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07351 485 823 Receptor kinase-like Gene Family AT4G11480 51.549 3.32e-115 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi3g07351 PK_Tyr_Ser-Thr 7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07351 - - vvo:131659752 1305.81