Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07349 ATGGAGAACCATAATAAGGTGCTAATGCTAATTGTGTGTACTTTCCTCTTTTGCTCCATGCCCATTTTTTGTAAACAGAATGCATTTACTACTTTTGCTCCAAATCAGTTTATCCAATATCCTAAAACAATTGTTTCTGCAGCTGGAACCTTTGAAGCAGGCTTTTTCGACCTTGGAGATACACAACGCCAATACTTTGGTATATGGTACGAGAGCATATTACCTAGGATTATTGTGTGGGTTGCCAATAGAAATACCCCTGTACGAAACTCGACAGGATTCCTGAAACTCAATGATCAGGGAACTCTTGTTATTCTCGATGGCTCCAAACGCATCATCTGGTACTCCAATTCGTCAAGAAAAATGGTGAAACCAGTTGTTGTATTGTTGTTGGATTCTGGAAACCTTGTTGTGAAAGATGCAAACAGCAGTGGGAATTTTCTTTGGGAAAGTTTTGATTATCCCGGTAACACTTTCCTTGCTGGAATGAAGCTGAAAAGTAACTTAGTTACTGGTCCATATCAATATCTCACATCTTGGAGAAACCCTGAAGATCCTGCTGAAGGAGAGTATTCATATAGGATAGATACACATGGTTTTCCTCAGCTGGTTACTGCAAAAGGAGCAACGTTTCTGTCTAGAGCAGGTTCATGGAATGGATTTCTTTTCACTGGTGTTTCTTGGCAAAGAATGCATAAATTCTTGAATTTCTCAGTAGTGTTCACTGACAAAGAAATCGCTTATCAATATGAAACTATGAACAGTTCAATTATTACTAAAATGGTGCTCGATCCAGATGGAAAGTCACAACGTACACTATGGTTAGATAGTGAACAAATTTGGGAGATTATAGTTGCTCGTCCTGCAGACCAGTGTGATTATTATTCGTTGTGTGGTATCAACTCTAACTGCAATGTTGATAACTTTCCAATATGTGAATGCTTGGAAGGTTTCATGCCAAAATTTCAACCAAAGTGGGAGTCATCAAATTGGTCTGATGGGTGTGTAAGGAAAACACATTTAAATTGTCTCCATGGAGATGGATTTTCGAAATACCCAAGCATGAAATTGCCAGATACGTCATCATCATGGTTTGACAAGAGCTTGAGCCTTGAGGAATGCAAGACAATGTGTTTGAAAAATTGTTCTTGCACTGCATATGCAAATTTAGATATCAGAGATGATGGGAGTGGCTGCTTACATTGGTTTAACAACATTGTGGACATGAGAAAACATCCAGAGCAAGGGCAAGACGTTTACATTCGGCTGGCATCTTCAGAACTTGATCATAAAAAGAATAAGAGGAACTTGAAGCTGGCTGGGACTCTTGCAGGTGTTATTGCATTCATTATAGGACTATCCATTCTTGTATTGGTTACATCAGCATATAGAAAGAAGTTTGGGTATATAAAAAAGTTATTTCACCGGAAGCATAAAATGGAAACGGAAGATGGTAACTTGGCTACAATATTTGATTTTTCGACCATCACTAATGCAACAAATAACTTCTCTGACAGAAACAAGTTAGGAGAAGGTGGTTTTGGAACAGTGTACAAGGGCTTAATGGTAGATGGCCAAGAGATTGCTGTAAAGAGGCTTTCAAAAACATCGGGACAAGGAGCCGAGGAGTTCAAAAATGAAGTAAAGTTGATGGCAACACTTCAACACCGTAATCTTGTAAAACTTCTTGGTTGTTCTATTCAACAAGATGAGAAGTTGTTGATATATGAATTCATGCCCAACAAAAGCTTGGATTGCTTTATTTTTGATACTATGCAAAGCAAATTACTAACTTGGACCAAGCGCTTGGAAATTATTGATGGGATTGCTCGAGGGCTGTTGTATCTCCATCAAGATTCTACACTAAGAATCATACATAGAGATCTCAAGACAAGCAATATTCTTCTTGATATTGATATGATCCCAAAGATATCAGATTTTGGTTTAGCCAGATCATTTATGGGAGACCAAGCTGAGGCGAATACAAATAGAGTGATGGGAACATATGGGTATATGCCTCCAGAATATGCAGTGCATGGATATTTCTCAATAAAATCAGATGTTTTTAGCTTTGGAGTCGTTGTACTTGAGATAATTAGCGGTAGGAAGAATCGCGGATTTTGTGACCCTATACACCATCTAAACCTTCTTGGTCATGCATGGAGACTATGGATTGAAGAAAGGCCACATGAGTTAATAGCTGATATATCGTATGATGCGGATATATGTTCCGAAATCATAAGATTTATTCATGTGGCTCTATTGTGTGTACAAGAGAAACCAGAAAACAGACCTAACATGTCATCTGTGGTTTTTATGTTAAAGGGTGAAAAGCTACTCCCAAAACCTAGTGAACCTGGGTTCTATGCTGGAAAAGATAATACAAATAGCACAGGATCTTCTTCAAAAGGTTGTTCGCTAAACGAAGCTTCAATCTCATTGTTAGAGGCACGAAAGCTAATAACTCACACAAACACAATGCAAATATACAAGGTTCTCATGCTAATGCTTCACACTTTCTTCTGTTTTATTATTCCCACTTTATCTATACAATATGAAACTTTTACTCCTATTACACCAAATCATTCTATCCAAGGTAATGAGACTTTGGTATCTTCTGCTGGAACTTTTGAAGCTGGATTCTTCAACTTTGCAAATTCACAATTCCAATACTTTGGTATATGGTACAAAATCATATCACCTAGAACCTATGTTTGGATTGCCAATAGAGATTCTCCGATACTAAACTCAACACCGAATCTGAAACTAACATATCAAGGAATTCTTATTATTGTTGATGATTCTGGAAGAATCATGTGGTCCTCCAATGCATCAACAATTGCGGAAAAACCAGTCTTGAAACCGGTCTTGTCGCTTTTAGATTCAGGAAACCTTGTTGTGAAAGATGGAGAGAAGATTTTGTGGGAGAGTTTTGATCACCCTGGTGACACTTTTCTTGCAGGAATGAAACTTAAGACAAATTTACTTAATGGTACTTCTAGGTCTCTAACGTCTTGGAAAAGTGTTGAAGACCCTTCTTCAGGTGAGTTTTCTTATCACATAGATGTTCATGGATTTCCTCAACTAGTTACTACAAAGGGAAAAGTTTTATTTAGTAGAGGTGGATCATGGAATGGTTATGCTTTTGGTGGAGTTTCATGGCTAAGGAATCTTAAACTATTCAAATTTTCGTTAGAGTTCAATGATAGAGAAGTTTCTTATGAGTATGAAACTTTGAAAAATGAAACAATTACTAGATTATGGCTTAATCCATCAGGTTTTGCTCAAAGATTGGTATGGTCAGATAGTGGAGGAGATTGGGAGATTATATCGACTCGTCCAATGGATCAGTGTGAATATTATTCAAGCTGTGATGCTAATTCTGTTTGTAATATTACAAACTCTCCAAGAACATGTCAATGCTTGGAAGGTTTTGTACCGAAATATTACGAAAAGTGGAATTCTTTAGATTGGTCTGGTGGATGTGTTAGACGAAAAGCATTAAACTGTATCGGAGATGAATTTATTAAGCATTCAGGAGTTGAGTTACCAGATACATCAAATTCTTGGTTTGATAAGAGTTTGAGTCTTGAGGAATGTGAGAAAATGTGTTTGAAAAACTGTTCTTGTTCAGCATATGCGAAGTTAGATGTTAAAAGTAATAGTGGATGTTTGCTTTGGTTTGGCAAGATAAGGGACTTGACAAAACATATCGATCAAGGACAAGATATTTTCATAAGACTTGCTGCTTCTGAGTTAGATCATAGAAGAAATAAATGGAGATTTAACAACAAGAAACTTGCCGGGGCACTTGGAGGAATCATTTTATTTGTCATGATTCTTGGATTGGCCACATTTACATACAAAAAGAGGAAGAAGCTTGCAAAGCCAGGGATGCTAAAAATATTTCATAGAAAGTGCAAAAGAGAGAAGGAAGATGTGCAACTATCAACAATATTTTGTTTTACAACCATATCTAAAGCCACAAATCATTTTTCAGACAGTAACAAGATAGGACAAGGTGGTTTTGGACCGGTATACAAGGGCGTATTAGAAGACGGGTTGGAGATCGTGGTGAAGAGGCTATCAGAAAATTCAGAACAAGGAGAAGAACAGTTCAAGAATGAAGTTATGTTGATGGCGAAACTTCAGCACCGTAATCTTGTAAAACTTCTTGGTTGTTCAATTTATCAAGAGGAAAAGCTTTTGATCTATGAATTGATGCCCAACAGAAGCTTGGATTATTTCATTTTTGATTCAACGCGAAAGGAAAAATTAGATCTGACAAAACGGTTCCAAATTATTGATGGAATTGCTCGAGGGCTGTTGTATCTTCATCAAGACTCTAGGTTAAGAATCATCCATAGAGATCTGAAAACAAGTAATGTTCTTCTTGATAATGATATGAATCCAAGAATATCTGATTTTGGTCTAGCTAGAACATTTAAAGGAGATCAAGATGAATCCAAAACAATTAGATTGATGGGAACATATGGTTATATGCCACCTGAATACGCGGTTCATGGATCTTATTCAATCAAATCAGATGTATTTAGCTTTGGTGTAATTGTTCTGGAGATAATTAGTGGGAGAAAGAATCGAAACTTTTATGACCATCATCACAATCTTAATCTTCTTGGTCATGCATGGAGACTATGGAATGAAGATAAGGCACAAGAATTAATAGATGACTTATTCCATGGTACAACAATTCCATGTGAAATGTTGAGATGCATTCATGTTGGTCTACTATGTGTGCAACAAACACCACAACATAGACCAAACATGTCATCTGTAGTCTTAATGCTGAATGGTGAAAATTTGCTGCCTGAACCTAGCGAACCCGGGTTTTATTCCAGATCAGTTCATCATCCGATTCAGGTAGAATCATCTTCAAGAAGTTGCGAAGATTGTTCACAAAACGAAGCTTCTATGTCATTGTTAGAGGCGCGATAA 4956 0.3709 MENHNKVLMLIVCTFLFCSMPIFCKQNAFTTFAPNQFIQYPKTIVSAAGTFEAGFFDLGDTQRQYFGIWYESILPRIIVWVANRNTPVRNSTGFLKLNDQGTLVILDGSKRIIWYSNSSRKMVKPVVVLLLDSGNLVVKDANSSGNFLWESFDYPGNTFLAGMKLKSNLVTGPYQYLTSWRNPEDPAEGEYSYRIDTHGFPQLVTAKGATFLSRAGSWNGFLFTGVSWQRMHKFLNFSVVFTDKEIAYQYETMNSSIITKMVLDPDGKSQRTLWLDSEQIWEIIVARPADQCDYYSLCGINSNCNVDNFPICECLEGFMPKFQPKWESSNWSDGCVRKTHLNCLHGDGFSKYPSMKLPDTSSSWFDKSLSLEECKTMCLKNCSCTAYANLDIRDDGSGCLHWFNNIVDMRKHPEQGQDVYIRLASSELDHKKNKRNLKLAGTLAGVIAFIIGLSILVLVTSAYRKKFGYIKKLFHRKHKMETEDGNLATIFDFSTITNATNNFSDRNKLGEGGFGTVYKGLMVDGQEIAVKRLSKTSGQGAEEFKNEVKLMATLQHRNLVKLLGCSIQQDEKLLIYEFMPNKSLDCFIFDTMQSKLLTWTKRLEIIDGIARGLLYLHQDSTLRIIHRDLKTSNILLDIDMIPKISDFGLARSFMGDQAEANTNRVMGTYGYMPPEYAVHGYFSIKSDVFSFGVVVLEIISGRKNRGFCDPIHHLNLLGHAWRLWIEERPHELIADISYDADICSEIIRFIHVALLCVQEKPENRPNMSSVVFMLKGEKLLPKPSEPGFYAGKDNTNSTGSSSKGCSLNEASISLLEARKLITHTNTMQIYKVLMLMLHTFFCFIIPTLSIQYETFTPITPNHSIQGNETLVSSAGTFEAGFFNFANSQFQYFGIWYKIISPRTYVWIANRDSPILNSTPNLKLTYQGILIIVDDSGRIMWSSNASTIAEKPVLKPVLSLLDSGNLVVKDGEKILWESFDHPGDTFLAGMKLKTNLLNGTSRSLTSWKSVEDPSSGEFSYHIDVHGFPQLVTTKGKVLFSRGGSWNGYAFGGVSWLRNLKLFKFSLEFNDREVSYEYETLKNETITRLWLNPSGFAQRLVWSDSGGDWEIISTRPMDQCEYYSSCDANSVCNITNSPRTCQCLEGFVPKYYEKWNSLDWSGGCVRRKALNCIGDEFIKHSGVELPDTSNSWFDKSLSLEECEKMCLKNCSCSAYAKLDVKSNSGCLLWFGKIRDLTKHIDQGQDIFIRLAASELDHRRNKWRFNNKKLAGALGGIILFVMILGLATFTYKKRKKLAKPGMLKIFHRKCKREKEDVQLSTIFCFTTISKATNHFSDSNKIGQGGFGPVYKGVLEDGLEIVVKRLSENSEQGEEQFKNEVMLMAKLQHRNLVKLLGCSIYQEEKLLIYELMPNRSLDYFIFDSTRKEKLDLTKRFQIIDGIARGLLYLHQDSRLRIIHRDLKTSNVLLDNDMNPRISDFGLARTFKGDQDESKTIRLMGTYGYMPPEYAVHGSYSIKSDVFSFGVIVLEIISGRKNRNFYDHHHNLNLLGHAWRLWNEDKAQELIDDLFHGTTIPCEMLRCIHVGLLCVQQTPQHRPNMSSVVLMLNGENLLPEPSEPGFYSRSVHHPIQVESSSRSCEDCSQNEASMSLLEAR 1651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07349 1651 Gene3D - 25 152 IPR036426 -
Vivi3g07349 1651 Gene3D - 852 978 IPR036426 -
Vivi3g07349 1651 CDD STKc_IRAK 509 776 - -
Vivi3g07349 1651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1453 1465 IPR008271 GO:0004672|GO:0006468
Vivi3g07349 1651 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
Vivi3g07349 1651 ProSiteProfiles Bulb-type lectin domain profile. 855 980 IPR001480 -
Vivi3g07349 1651 Gene3D Phosphorylase Kinase; domain 1 1299 1407 - -
Vivi3g07349 1651 SMART serkin_6 1332 1579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07349 1651 SMART serkin_6 503 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07349 1651 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 342 423 - -
Vivi3g07349 1651 Gene3D Phosphorylase Kinase; domain 1 475 578 - -
Vivi3g07349 1651 SUPERFAMILY Protein kinase-like (PK-like) 1315 1603 IPR011009 -
Vivi3g07349 1651 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 186 IPR036426 -
Vivi3g07349 1651 Gene3D Transferase(Phosphotransferase) domain 1 579 781 - -
Vivi3g07349 1651 Gene3D Transferase(Phosphotransferase) domain 1 1408 1609 - -
Vivi3g07349 1651 CDD PAN_AP_plant 339 424 - -
Vivi3g07349 1651 SUPERFAMILY alpha-D-mannose-specific plant lectins 904 1011 IPR036426 -
Vivi3g07349 1651 CDD B_lectin 861 981 IPR001480 -
Vivi3g07349 1651 ProSiteProfiles PAN/Apple domain profile. 1170 1249 IPR003609 -
Vivi3g07349 1651 Pfam D-mannose binding lectin 903 1007 IPR001480 -
Vivi3g07349 1651 Pfam D-mannose binding lectin 78 181 IPR001480 -
Vivi3g07349 1651 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 765 - -
Vivi3g07349 1651 SUPERFAMILY Protein kinase-like (PK-like) 487 774 IPR011009 -
Vivi3g07349 1651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Vivi3g07349 1651 ProSiteProfiles Bulb-type lectin domain profile. 29 151 IPR001480 -
Vivi3g07349 1651 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 782 - -
Vivi3g07349 1651 SMART blect_4 861 981 IPR001480 -
Vivi3g07349 1651 SMART blect_4 35 155 IPR001480 -
Vivi3g07349 1651 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1408 1611 - -
Vivi3g07349 1651 Gene3D Hepatocyte Growth Factor 340 425 - -
Vivi3g07349 1651 ProSiteProfiles Protein kinase domain profile. 503 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07349 1651 CDD PAN_AP_plant 1168 1249 - -
Vivi3g07349 1651 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 469 578 - -
Vivi3g07349 1651 ProSiteProfiles PAN/Apple domain profile. 343 424 IPR003609 -
Vivi3g07349 1651 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1296 1407 - -
Vivi3g07349 1651 ProSiteProfiles Protein kinase domain profile. 1332 1609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07349 1651 CDD B_lectin 42 155 IPR001480 -
Vivi3g07349 1651 Pfam PAN-like domain 1172 1233 IPR003609 -
Vivi3g07349 1651 Pfam PAN-like domain 343 409 IPR003609 -
Vivi3g07349 1651 Pfam Protein tyrosine and serine/threonine kinase 507 771 IPR001245 GO:0004672|GO:0006468
Vivi3g07349 1651 Pfam Protein tyrosine and serine/threonine kinase 1335 1601 IPR001245 GO:0004672|GO:0006468
Vivi3g07349 1651 ProSiteProfiles EGF-like domain profile. 1114 1151 IPR000742 -
Vivi3g07349 1651 CDD STKc_IRAK 1338 1605 - -
Vivi3g07349 1651 Pfam S-locus glycoprotein domain 1040 1148 IPR000858 GO:0048544
Vivi3g07349 1651 Pfam S-locus glycoprotein domain 214 322 IPR000858 GO:0048544
Vivi3g07349 1651 SMART ntp_6 1170 1248 IPR003609 -
Vivi3g07349 1651 SMART ntp_6 344 423 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07349 Vivi-Chr3 203860926 203868905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07349 446 788 Receptor kinase-like Gene Family AT4G23230 52.586 3.27e-111 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi3g07349 PK_Tyr_Ser-Thr 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07349 - - vvo:131659752 3390.13