Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07340 ATGGAGCAACAACCAGAAGTTTTTACTTCTTCCAACGGAATTCATACTTACGATGTTTTCCTCAGTTTCAGAGGAGAAGACACTCGCTACGGTTTCACCGGAAATCTCTACCAAGCTCTAAACCAGAAAGGAATCAAAACTTTCATGGACGACGAAGTCATTAAGAGAGGACAACAAATTTCACCCACCATTTTCAAAGCAATTCAACACTCTAGAATAGCTATAGTTGTTTTCTCTAAAACCTATGCATCCTCGAAATGGTGCCTTCAAGAACTCGTCAAAATCATTGCATGTTATAGAGACAATGGACTAGTGGTGATTCCGGTGTTTTACAAAGTGGATCCATCAGAGGTTCGAAACCATACCGGGAATTATGGACAGCAGTTGGCCATGCATGAGGAGAAAATGAAGGAGGAAGTGCGGAGTTGGAGGTTGGCTTTGCGTGATGCTTCTAATCTGGCAGGATGGACTTTTAGAGATGGATATGAATATGAATATGAGTTTATCAAAAGGATCGTTGACACAGTGCACAACACATCAAAACAAAACCTTTCACATGTTGATGATCATGCAGTTGGACTTGAGATGCGCGTATCTAATATACTATTCCGTTTACAAATGCTTGATGCAACTGTTATCATGATAGGAATATGCGGGGTTGGTGGAATAGGAAAAACTACTTTGGCAAGAGCGGTGTACGACTCAATTGGCCAACAATTTGAGGGTCTTTGCTTCCTCCCTGATGTCAGAGGAAATTCAAGCAAATATGGATTGGCATATCTACAACAGGTAATTCTTTATGATACGGTTGGCGAGAGTATCAAGCTGCGTAATGAGAATGAAGGAATTTCAATCCTGATCAGAAAGTTGCAAAATAAAAGGATTCTTTTGATACTTGATGACATTGACAAATTGGATCAATTGAAGAATTTAGCAGGAACACCTAGTTGGTTTGGTTGTGGAAGTAGGATTATCATAACTACTAGGCGTAAAGATATTCTAGCTGCTCATGGAGTTGGAAATATATATGATGTACCTGTATTTAATTTTCAGGAAGCTCTTGTATTTTTAAGTTCAATTGCATCAAAAAGACCTAATCCTGATGTAGAATGGGACCGCGCAATCAGCTATTCCCGCGGTCTTCCATTGGTCTTAAAGATTATCGGTTCTGATTTATTAGAAAAATCACCGGATGAATGGGAGATTTCATTAGGCAGATATGAAAAAGTCTGCAATGAAGAAACTCAGAGTATACTTGAAGTGAGTTATAATAGTTTGAATGAACTCGAGAAGAGAATTTTCACCGATATTGCATGTTTCTTTGCTGGAGAGCCTTTTTCATATGTCAAAAAAGTACTATCTGCGTGTGGTTTCGTTACAAAATATGGTATTGAGTCTATTGACAGACTTAAGGATAGATCCCTTATATCGATCACTCCCAGTGGAAGTTTGATGGTGCATGATCATATAATAGACATGGCTATGAGTATAGTACAACAAGAATCACCTACGAATCCTTCTAGTTGTCTCATTTTCAACAAATTCAAGAATATGAAGAGTTTGATTAGTATTGATTTCACTGACTGTATATACATAACAGAAATACCTGATATGTCCGGTATCCCAAACTTGAGGATATTGTATCTTGATAATTGTATAAATGTTACAAAAATTCATGATTCTGTTGGATTTCTTGATAACCTGATGGAGCTGACAGCCACAGGATGCACTAATCTAGAAACAATCCCTAAGGCATTCGAGTTGGCATCTCTTAAAGTTCTCTCTTTCTCCGAGTGTCCGAAACTTGTGAGGTTCCCAGAAATATTGTGCAAGATCGAAAATTTGCAACACATCAACTTGTGGCAAACTGGCATAGAGGAATTACCATTTTCAATTGGAAATGTGACTGGACTTGAAGTTTTAACTCTGATGGATTGTACTAGGCTTGATAAGCTACCTAGTAGCATTTTTACGCTACCAAGACTTCAAGAAATTCAAGCTGACTCGTGTAAAGGGTTCGGCATTTCTATTGAATGTGAAGATTATAATGGACCAGTGAAATTCTCCGTGTCTCCAAACAAGATTCGTCTGTATTTGAGCTCTTGCAATTTAACAAATGAACATCTTTTTATCTGTCTCCGTGGTTTCGCCAACGTTGTACACATGGACCTGTCTTACAGTAATTTCACTGTCCTTCCACCATGCATTAAAGAATGTATCAACTTGAACACTCTTCTGTTAACAAACTGCAATCAACTTCAAGAAATCTCAGTAATTCCACCAAATTTGATGGATATCGATGCAGTGAATTGCACATCATTGACATCTCAGTCACAAAGTGTACTATTAAGCCAAGCATTTCATGAAACTGGAGAAAAAAGTGTAATGCTTCCAGGATCAAGTATACCAGAATGGTTCGATCATCGCAGCAGTGAAAGATCCATTTCCTTTTACGTTCGTGAGAGATTCCCTAGTATTTGTGTGTGTGTTGTTTTCGGAGTGATGGAAAAACTGCCTTATCATTTTCTAGTTAACGTCTGTTTAATCATCAACGGCCATAAAACAATACTATCACAATGTTGTAGTCGGTCAATTGTAAAAGAACATGTGTGGATGTTTGATCTAAGAAATTTAATCGACCGTAGAGAAACATGGTTGGAACGTGGTTGGAATCATGTGGAAATTTCATGCGAAGATTGTCAAGATGAGCATTTGATGGCCGAAGCTGTTCATGGAGTTAGAAGAAAGACAATTGTAAAATGGTATGGAGTTCATGTGTATAGACAAGAAAACAACACAATGGAGAATGTCTTATTCACAAGTGCCAACATAAAACAAGAAAACAATATTAATGATGAAAGATTTAATGGAGACAATTACCCTCTGTCTAAACGCATTAAGTATTTTGTAGTGTGTTCTCTTGTTGGAATGGAGATACTTCTCCCAAATAATTATGATGGTGTCAAGGAAGTTAGAGATATGAGTTACTCTACTATGGATTCTTTTACTATATCCAATGTATCAAGAGGTTCTACAAGGCTTTGGAAGAGAAATGTTGAACTTCAAAATTTAAAGCTTAGACCGGATTGTGAAATTCCATTATGCATTGATCAGAAGTTTCTGCAACTGCACCGCAACGCAGCCCAACCTCTGCATTACCAACTTTTGTGCAGCTGTGTTTTCCGTCTTTGA 3192 0.3775 MEQQPEVFTSSNGIHTYDVFLSFRGEDTRYGFTGNLYQALNQKGIKTFMDDEVIKRGQQISPTIFKAIQHSRIAIVVFSKTYASSKWCLQELVKIIACYRDNGLVVIPVFYKVDPSEVRNHTGNYGQQLAMHEEKMKEEVRSWRLALRDASNLAGWTFRDGYEYEYEFIKRIVDTVHNTSKQNLSHVDDHAVGLEMRVSNILFRLQMLDATVIMIGICGVGGIGKTTLARAVYDSIGQQFEGLCFLPDVRGNSSKYGLAYLQQVILYDTVGESIKLRNENEGISILIRKLQNKRILLILDDIDKLDQLKNLAGTPSWFGCGSRIIITTRRKDILAAHGVGNIYDVPVFNFQEALVFLSSIASKRPNPDVEWDRAISYSRGLPLVLKIIGSDLLEKSPDEWEISLGRYEKVCNEETQSILEVSYNSLNELEKRIFTDIACFFAGEPFSYVKKVLSACGFVTKYGIESIDRLKDRSLISITPSGSLMVHDHIIDMAMSIVQQESPTNPSSCLIFNKFKNMKSLISIDFTDCIYITEIPDMSGIPNLRILYLDNCINVTKIHDSVGFLDNLMELTATGCTNLETIPKAFELASLKVLSFSECPKLVRFPEILCKIENLQHINLWQTGIEELPFSIGNVTGLEVLTLMDCTRLDKLPSSIFTLPRLQEIQADSCKGFGISIECEDYNGPVKFSVSPNKIRLYLSSCNLTNEHLFICLRGFANVVHMDLSYSNFTVLPPCIKECINLNTLLLTNCNQLQEISVIPPNLMDIDAVNCTSLTSQSQSVLLSQAFHETGEKSVMLPGSSIPEWFDHRSSERSISFYVRERFPSICVCVVFGVMEKLPYHFLVNVCLIINGHKTILSQCCSRSIVKEHVWMFDLRNLIDRRETWLERGWNHVEISCEDCQDEHLMAEAVHGVRRKTIVKWYGVHVYRQENNTMENVLFTSANIKQENNINDERFNGDNYPLSKRIKYFVVCSLVGMEILLPNNYDGVKEVRDMSYSTMDSFTISNVSRGSTRLWKRNVELQNLKLRPDCEIPLCIDQKFLQLHRNAAQPLHYQLLCSCVFRL 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07340 1063 Gene3D - 348 433 IPR042197 -
Vivi3g07340 1063 Pfam NB-ARC domain 198 429 IPR002182 GO:0043531
Vivi3g07340 1063 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 182 - -
Vivi3g07340 1063 SUPERFAMILY L domain-like 487 778 - -
Vivi3g07340 1063 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 437 IPR027417 -
Vivi3g07340 1063 Gene3D - 177 339 IPR027417 -
Vivi3g07340 1063 Gene3D Ribonuclease Inhibitor 501 614 IPR032675 -
Vivi3g07340 1063 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 156 IPR035897 -
Vivi3g07340 1063 Gene3D Ribonuclease Inhibitor 623 785 IPR032675 -
Vivi3g07340 1063 ProSiteProfiles TIR domain profile. 15 180 IPR000157 GO:0007165
Vivi3g07340 1063 Gene3D - 11 176 IPR035897 -
Vivi3g07340 1063 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 773 IPR044974 GO:0006952
Vivi3g07340 1063 SMART till_3 16 153 IPR000157 GO:0007165
Vivi3g07340 1063 Pfam TIR domain 17 185 IPR000157 GO:0007165
Vivi3g07340 1063 PRINTS Disease resistance protein signature 289 303 - -
Vivi3g07340 1063 PRINTS Disease resistance protein signature 586 602 - -
Vivi3g07340 1063 PRINTS Disease resistance protein signature 214 229 - -
Vivi3g07340 1063 PRINTS Disease resistance protein signature 378 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07340 Vivi-Chr3 203442870 203449235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07340 215 779 WRKY Transcription Factor Family AT5G45050 27.432 4.92e-40 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07340 - - vvo:131659751 2119.35