Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07312 ATGGAGGGTATTCAATTTCAGAGAGAAAATCTGCTGTTCCTTGCAAATTCTGTGAAGCTGTTGTTAGAAAACTATGTTTTTACTGAGTTCGGCGATAACTCCAGGTATGACTTTTCATTTTTGAAGAAAACATTGTTGGATGTTCAAGATGTTCTACTTTGTCATGATCTGGAGAAACTCATCCCTATTCCAGCTGTCAATCTATCGCTGGATTCGCTCAGATATGCTGTCTTTCATCTTGCTACTTTCTTTGACAAATTTGACTTTTCATTGAGGTATGATACCCCACATAATATTAATCTGCTCAAAAATCTTGTTCGTTTAAATCATGAAATTGATGTGATTAATTATAAAACGAAAAGATTAATTGAAATATCACTGGGCTTGAGTTCAGGAGAACAACTAGCTGAATTAAGTCTTTCCAATTCTAATTTGGATGCTGATTCTTCTATTTATGGAAGAGACGCTGATATTCAGAAACTTAAAGATATGTTGTTGTCTAGTGATAGTAAAATAAGAGTGATTTCCATTGTTGGTATGGGAGGGATTGGTAAAACAGCCCTTGCCAAACACCTTTACAATCATCCTCAAGTTAACGACAAATTTGAGTTAAGAGTATGGGCAGATTTCTCAGAGCATGTTGATGAGTTCTCAAATTATGGGCAGATTTTTAAAACCATTCGTGAATCTATTACTTCACAAACAACCAGAAATGATACAACTGACGTCACTGCCATTAACCCAAAAAAATTGATAGTACTTGATGGTGTGTGGATCGCGAGACTTGTCAATTTGACAACCTTTCTGATGGATAACTTTAATGCTTGGGAAACAGGAAGTAGGATCATTGTCACAACACGAGATGAAAGAATTGCAATATCCATGCAACCCTTTCTTTTTGTCCACTATTTGAGACCTTTGGAAGTTGAAGATTGTTGGTCCTTATTTTCCAAATATGCATTTGGACCATGTCACAACCGACAACAATCCCATCTAGAAGAAATCGGTAGGGAAATTGCTAAAAAGTGTTATGGATTACCATTAGCTGCAGTAGCACATGGGCCTCTTCTTCGCATCTTATTGTTTCAAGAAGACTGGAATTATGTGCAGGAAAGTAATGTTCGGGATGTAGATTATGAGGTGCACGCTTCTCTCGAATTGAGCTACAATTTTCTTTCTTATCCTTTAAAACAATGTTTTCAATATTGTTCAATTTTTCCAAAGAAATCCATCTTAGAAAAAAAGATGGTAGTTCAGTTGTGGATTGCAGCAGGCTTACTTCAACCATCGTCCACAGATCAGGAAAAAGTTGGAGAAGAATACTTTGATGAGCTAGTGTCAAAGTCGTTGATACATCAGCGATCTATTGGTGATGATGAGGAAAGAAACTTTGAAATGCACAACTTAATCCATGATATGGCTACAGAGGTTTCATCTCCATACTATATCCATATGGACAAACATAATCTACATGATAGGGTGCATACCTTATCATACAATAGAGAGGCATATGATTCATATGATAAATTTTTTAAATTATACGAATTAAAAGGCCTGAGTACTTTTGTGGCATTACCATTACAAGAACAATTTCCTCTTTGTTTGTTATCAAATAAGGTAGTGCATGACTTGCTGCCAACAATGAAACAATTACGCATGTTATCTCTGTCAAGCTACAGAAGTATCACCAAGGTTCCCAACTCTATTGGAAATTTGTTACACATGCGGTACCTAAATCTTTCTCACACTAATATTGAGAGTCTGCCTTCAGAAATATGCAAGCTTTACAATCTGCAATTCTTGTTGTTGGCGGGCTGTAAAAGGTTCACTGAATTGCCGGAGGACATGGGCAAATTGGTTAATCTGCGCTACCTTGACGTTAGTAACACCGCATTGAGGGAGATGCCTGTACAAATAGCACAACTAAAAAATCTCCACACTTTGTCTGACTTTGTTGTCAGCAAACATAATGGTGGATTGAATATTGCACAGCTAGGAAAATTTCTCTACCTACATGGAAAACTTTCAATCTCACAGCTACAAAATGTTAATGACCCCTTTGAAGTAGACCGAGCAAATATAAAGATGAAAGAACAAATAGATGAGTTAGCTTTGGAATGGGATTGTGATGGTACTACTTTAGATTCACAAATTCAAAGTGATGTGCTTGAAAAGTTACGACCCTCAACAAATTTGAAAAGTCTCACCATCAAAGGCTATGGTGGAATCAACTTCCCCAATTGGTTAGGTGATTCTTTGTTTAGCAACATGGTGCATTTAAGGATCTCGAATTGTAATGATTGTTTATGGCTTCCATCCCTTGGAAAATTGGGTAATCTGAAAGAACTCGTTATTGAAGGGATGCAATCAGTGGAGACAATTGGTATTGAGTTCTATGGAAGTGGTGATTCTTCATTTAAACCATTTCCCTCTTTGGAGAGTCTACACTTTGAGAATATACAAGAGTGGAAGGAATGGGACTTGATTGGAGATACAGCGGCTACAATGTTTCCTAATCTAAAAACTTTATCGCTAAGAAAGTGCCCGAAACTGATAGCCGGAAACATAACTGAAAAATTTCCTTTCTTAACTGAACTCGAGTTAAGAGAATGTCCTTTACTGGTGCAATCAATGCCATTATCTGATCATGTATTCAGGAAACTGATGTTCCCTTTGAATCTTCTTCAACAACTGACCATAGACGGCATTCCATCTTCAATGTCTTTTCCAACAAATGGTCTACCAAAAACCTTGAAATTACTGATAATCAATAACTGTGAAAATCTAGAGTTCCTTCCTCTTGAATACTTGTGCAATTACACATCGCTTGAAGAATTGAAAATATCTTATAGCTGCAATTCAATGACATCATTTACCTTGGGTGCTCTCCCTGTTCTCAAGAGTCTTTTCATTGAGGGTTGTAACAATCTGAAATCAATATCAATTGCAGAAGATGTGTCACTAAAGAGTCTCTCGTTTCTTAGAAGCATCAAAATATGGGATTGTAATGAATTGGAGTCATTTACCCTAGGTGGATTGGCCACTCCAAATCTTCGCTATATTGCACTATGGAAGTGTGAGAAGCTTCATTCATTACCAGAAGCAATGAACAGTCTAGCTGGCCTTCGAGAAATGGAAATTGATAATCTACCAAACCTTCAATCTTTAGTTATAGATGAGTTGCCTAGTAGTTTACAGAAACTGTCTGTTGGCTCTGTCGGTGGGATTATGTGGAATACTGAGCCAAGTTGGGAACATCTCACTTGTCTTTCAGTGTTGCGAATTAACGGTGATGATACGGTGAACATGTTGATGGGGCCACTGCTACCTACATCGCTTGTGAAACTGTGCATTTGTGGTCTTGATGATACAAGCATTGATGAGAAGTGGCTTCAGCATCTCACTTCTCTTCAAAACCTTGAGATTATTAACGCACCCAAACTCAAGTCGTTGCCAAAGAAAGGATTTCCTTCCTCACTTTCAGTACTAAGTGTGACTCGCTGTCCATTACTAGAAGCAAGTTTGCTGAAAAAGCGGGGGAAAGAGTGGCGTAAGATTGCTCACATTCCCTCCATAGTTATTAATGATGAATTGATCACATGA 3603 0.3755 MEGIQFQRENLLFLANSVKLLLENYVFTEFGDNSRYDFSFLKKTLLDVQDVLLCHDLEKLIPIPAVNLSLDSLRYAVFHLATFFDKFDFSLRYDTPHNINLLKNLVRLNHEIDVINYKTKRLIEISLGLSSGEQLAELSLSNSNLDADSSIYGRDADIQKLKDMLLSSDSKIRVISIVGMGGIGKTALAKHLYNHPQVNDKFELRVWADFSEHVDEFSNYGQIFKTIRESITSQTTRNDTTDVTAINPKKLIVLDGVWIARLVNLTTFLMDNFNAWETGSRIIVTTRDERIAISMQPFLFVHYLRPLEVEDCWSLFSKYAFGPCHNRQQSHLEEIGREIAKKCYGLPLAAVAHGPLLRILLFQEDWNYVQESNVRDVDYEVHASLELSYNFLSYPLKQCFQYCSIFPKKSILEKKMVVQLWIAAGLLQPSSTDQEKVGEEYFDELVSKSLIHQRSIGDDEERNFEMHNLIHDMATEVSSPYYIHMDKHNLHDRVHTLSYNREAYDSYDKFFKLYELKGLSTFVALPLQEQFPLCLLSNKVVHDLLPTMKQLRMLSLSSYRSITKVPNSIGNLLHMRYLNLSHTNIESLPSEICKLYNLQFLLLAGCKRFTELPEDMGKLVNLRYLDVSNTALREMPVQIAQLKNLHTLSDFVVSKHNGGLNIAQLGKFLYLHGKLSISQLQNVNDPFEVDRANIKMKEQIDELALEWDCDGTTLDSQIQSDVLEKLRPSTNLKSLTIKGYGGINFPNWLGDSLFSNMVHLRISNCNDCLWLPSLGKLGNLKELVIEGMQSVETIGIEFYGSGDSSFKPFPSLESLHFENIQEWKEWDLIGDTAATMFPNLKTLSLRKCPKLIAGNITEKFPFLTELELRECPLLVQSMPLSDHVFRKLMFPLNLLQQLTIDGIPSSMSFPTNGLPKTLKLLIINNCENLEFLPLEYLCNYTSLEELKISYSCNSMTSFTLGALPVLKSLFIEGCNNLKSISIAEDVSLKSLSFLRSIKIWDCNELESFTLGGLATPNLRYIALWKCEKLHSLPEAMNSLAGLREMEIDNLPNLQSLVIDELPSSLQKLSVGSVGGIMWNTEPSWEHLTCLSVLRINGDDTVNMLMGPLLPTSLVKLCICGLDDTSIDEKWLQHLTSLQNLEIINAPKLKSLPKKGFPSSLSVLSVTRCPLLEASLLKKRGKEWRKIAHIPSIVINDELIT 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07312 1200 Gene3D - 307 393 IPR042197 -
Vivi3g07312 1200 Gene3D - 395 476 IPR036388 -
Vivi3g07312 1200 Gene3D - 132 298 IPR027417 -
Vivi3g07312 1200 Gene3D Ribonuclease Inhibitor 532 881 IPR032675 -
Vivi3g07312 1200 FunFam Probable disease resistance protein At1g63360 389 476 - -
Vivi3g07312 1200 PANTHER DISEASE RESISTANCE PROTEIN RP 41 870 IPR044974 GO:0006952
Vivi3g07312 1200 Gene3D Ribonuclease Inhibitor 882 1192 IPR032675 -
Vivi3g07312 1200 PRINTS Disease resistance protein signature 244 258 - -
Vivi3g07312 1200 PRINTS Disease resistance protein signature 174 189 - -
Vivi3g07312 1200 PRINTS Disease resistance protein signature 343 357 - -
Vivi3g07312 1200 PRINTS Disease resistance protein signature 835 851 - -
Vivi3g07312 1200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 403 IPR027417 -
Vivi3g07312 1200 Pfam NB-ARC domain 155 394 IPR002182 GO:0043531
Vivi3g07312 1200 SMART LRR_typ_2 572 595 IPR003591 -
Vivi3g07312 1200 SMART LRR_typ_2 619 642 IPR003591 -
Vivi3g07312 1200 SUPERFAMILY L domain-like 491 934 - -
Vivi3g07312 1200 SUPERFAMILY L domain-like 894 1171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07312 Vivi-Chr3 203128954 203137796 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07312 543 657 WRKY Transcription Factor Family AT4G12020 33.621 6.83e-09 58.5