Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07310 ATGGAGGCCATTCAATTTCAGAGATATACACTGGTGTCACTCTCAAATACTGTGAAAAAGTTGTTAGAAAAGATTGTTTCTACTCAGCTCGTCGACACGTTCCGGATCAAGAACGTTAACGCTTCACTTTCGAAAACGGTGAAGGAAACACTGGTGGATCTTCAAGATGTTCTTAATTATGCTAACAACAAACTCATCCCAAGTCAAGCTAACAACGAATCACTGGATATGCTGAGACGTGATGTTCTTCAAGTTTCCTATTTGCTTCACGAAACTGATTTTTTTGGGTATGCTACCGTACTTACTGCTAAGCACCTCAAAATTCATTCTCGTTTAACTTTCTTCATTCAACTCATTAAGTCTAGAACGGTCAATTTAATTCAAATATTACAAGGCTTTAGAAAACAAATTGGTGGTTATGAATCTGCTATATATGTAAGAGGCCATGATATTGAGAAACTTATACATCTTTTGTTGTCTAGTATTGATGGTGATAGTAAAATAAGAGTCATTTCCATTGTTGGTATGGGAGGGATTGGTAAAACAGCTCTGGCTAAACACCTTTACAATCTTCCTCAAGTTAATGACAAATTTGAGTTCAAACTGTGGGCAGATTTCTCAAATGATATTGACGCTTTCACTGTTTTTCAAAACATTCTTAGATTTATTATTTCAAAAACAACCACAAGTAATGATACAACCATTTACCCAATTTTTTTGCTGGTATTGGATGGTGTGTGGGATGCAAGATCTGTCAATTGGACATTACTTATGGATATCTTTAATGCGGGGGAAACGGGAAGTAGGATCATTGTAACATCAAGAGATGAAAGAGTTCCACTATCCATACAAACCTTTCTTTCTGTCCACCATCTGAGACCCTTGAAAGCTGAAGATTGCTGGTCTTTACTTGCTGAACATGCATTTGGAGCGCATAACTACCACCAGCGATCCAATCTAGAAGAAATTGGCAGGAAAATTGCAAGAAAGTGTGATGGTTTACCATTAGCTGCTGTAGCACATGGGGCTCTTCTTCGCATCTGGTCTGACCCGTATGCTTGGAATTATGTGCTAGAAAGTAAGACTCAACATATAGCTTATGAGGTGCTAGCTTCTCTCAAATTGAGCTACAGTTTTCTTTCTGATCCTTTAAAACAGTGTTTTCAATATTGTTCAATTTTTCCAAAGAAGTCCATCTTAGAAAAAAAGATGGTAGTTCAGTTGTGGATTGCAGCAGGCTTACTTGAATCATTGTCCACAGATCAGGAAAAAATTGGAGAAGAATACTTTGATGAACTAGTGTCAAGGTCGTTGATACATCGGCGATCTATTAGTGACAACGAAGAAAACTTTGGAATGCACAACTTCATCCATGATTTAGCTACAGAGGTTTCATCTCCAGAAGTTTCATCTCCATATTGCATCAATATGGACAAACATAACCTAGATTTTAGGATGCATAATTTCTCATACAACAGAGGAACATATGACTCATATGACAAATTTGATAAATTATACGGATTAGAAGGTTTGCGTACCTTCCTAGCATTCCCGTTACAAGAACAACTGCCTCTTTGTTTGCTATCCAACAAGATAGTACATGACTTGCTGCCAAAAATGAAACAATTACGCATGTTGTCTCTATCAAGCTACAAGAGTATCACCAAGCTTCCCAACTCTATTGGAAATTTGTTAGACTTGCGGTACTTAAATCTTTCTCACACTAGTATTGACAGGCTGCCTTCTGAAACATGCAAGCTTTACCATCTGCAGTTCTTGTTGTTGGCAGGCTGTAAAATGCTCACTGAATTGCCGAAGGACATGGAAAAATTGATTAATTTGCGCCACCTTGACATTAGTAACACTGCATTGAGGGAGATACCTGTACAAATAGCCAAACTAGAAAATCTCAACACTTTGTCTGACTTTGTTGTCAGCAAACATAATGGTGGATTAAATATCGCAGATCTAGGAAATCTTCCCCACCTACGTGGAAAACTTTCAATATCACAGCTACAAAATGTTGATGACCCCTTTGAAGTAGTTCGAGCCAATATAAAGATGAAAGAAAAAATAGACGAGTTATCTTTGGAATGGGATTGTGGTAGTGCTTTTCAAGATTCACAAATTAAAAGTGTTGTACTTGAAAAGTTGCAACCCTCAACGAATTTGAAAAGTCTCACCATCAAAGGCTATGGTGGAATCAGCTTTCCAAATTGGTTAGGTGATTTTTTATTTAGCAACATGGTGTATTTAAGGATCTTGAATTGCAATGATTGTTTATGGCTTCCGCCCCTTGGACAATTGGGTAATTTGAAAGAACTCATTATTGAAGGGATGCAATCAGTGGAGATAATTGGTATTGAGTTCTATGGAAGTGGTGGTTCTTCATTTCAACCATTTCCCTCTTTGGAGAGTTTACACTTTGAGAATATGCAAGAGTGGAAGGAATGGGACTTGATTGGAGGTACGACTACAACGTTTCCTAATCTAAAAACTTTATCGCTAAGAAAGTGCCCGAAACTGATAGCCAGAAACATAACTGAAAAACTTCCTTTCTTAACTGAACTTGAGTTACGAGAATGTCCTTTACTGGTGCAATCAATTCCATTATCTGATCATGTATTTGGGCAACTGATGTTCCCTCTGAATTCTCTTCAACAGCTGACCATAGACGGTTTTCCATCTCTGATGTCGTTCCCAATAGACGGTCTACCAAAAACTTTGAAGCTTTTCATAATCAGTAATTGTGAGAATTTAGAATTCCTTCCTCACAATAACTTACACAATTATACATCACTTGAGGAATTAAAAATATCTTATAGCTGTAATTCAATGATATCATTTACATTAGGCACTCTCCCTGTCCTCAAGAGTTTGTTTATTGAAGGTTGTATAAATCTGAAATCAATATTAATTGCAGAAGACGAGTCGGCAAAGAGTCTCTCATTTCTTAGAAGCATCAAAAGATGGAATTGTAATGAACTGGAGTCATTTCCCTCAGGTGAATTGGCAACTCCAAACCTTGTTTATATTGCATTGTGGAAGTGTGAGAAACTTCATTCACTGCCAGAAGCAATGAACAGTCTAGCTGGCCTTCAAGAACTGGAAATTGATAATCTACCAAAGCTTCAATTTCTAGTCATAGATGAGTTACCTAGCAGTTTACAGAAACTGTCTGTTGGCCCTATTGGTGGGATTATGTGGAATACTGAGCCAACTTGGAAACATCTCACTTGTCTCTTGGAGTTGCGAATTAACGGTGATGATGTGGTGAACACGCTGATGGGGCCACTGCTACCTACATCGCTTGTGAAACTGTGCATTTGTGGTCTTAATGATACAAGCATTGATGAGAAGTGGCTTCAACATCTCACTTCTCTTCAGAATCTTGAGATTATTAACGCTCCCAAACTCAAGTCACTGCCAAAGAAAGGATTTCCTTCCTCGCTTTCAGTACTAAGTGTTGCTCGCTGTCCATTACTAGAAGCAAGTTTGCGGACAAAGCGGGGGAAAGAGTGGCGTAAGATTGCTCATATTCCCTCCATAGTTATTAATGACGAATTGATCACATGA 3576 0.3806 MEAIQFQRYTLVSLSNTVKKLLEKIVSTQLVDTFRIKNVNASLSKTVKETLVDLQDVLNYANNKLIPSQANNESLDMLRRDVLQVSYLLHETDFFGYATVLTAKHLKIHSRLTFFIQLIKSRTVNLIQILQGFRKQIGGYESAIYVRGHDIEKLIHLLLSSIDGDSKIRVISIVGMGGIGKTALAKHLYNLPQVNDKFEFKLWADFSNDIDAFTVFQNILRFIISKTTTSNDTTIYPIFLLVLDGVWDARSVNWTLLMDIFNAGETGSRIIVTSRDERVPLSIQTFLSVHHLRPLKAEDCWSLLAEHAFGAHNYHQRSNLEEIGRKIARKCDGLPLAAVAHGALLRIWSDPYAWNYVLESKTQHIAYEVLASLKLSYSFLSDPLKQCFQYCSIFPKKSILEKKMVVQLWIAAGLLESLSTDQEKIGEEYFDELVSRSLIHRRSISDNEENFGMHNFIHDLATEVSSPEVSSPYCINMDKHNLDFRMHNFSYNRGTYDSYDKFDKLYGLEGLRTFLAFPLQEQLPLCLLSNKIVHDLLPKMKQLRMLSLSSYKSITKLPNSIGNLLDLRYLNLSHTSIDRLPSETCKLYHLQFLLLAGCKMLTELPKDMEKLINLRHLDISNTALREIPVQIAKLENLNTLSDFVVSKHNGGLNIADLGNLPHLRGKLSISQLQNVDDPFEVVRANIKMKEKIDELSLEWDCGSAFQDSQIKSVVLEKLQPSTNLKSLTIKGYGGISFPNWLGDFLFSNMVYLRILNCNDCLWLPPLGQLGNLKELIIEGMQSVEIIGIEFYGSGGSSFQPFPSLESLHFENMQEWKEWDLIGGTTTTFPNLKTLSLRKCPKLIARNITEKLPFLTELELRECPLLVQSIPLSDHVFGQLMFPLNSLQQLTIDGFPSLMSFPIDGLPKTLKLFIISNCENLEFLPHNNLHNYTSLEELKISYSCNSMISFTLGTLPVLKSLFIEGCINLKSILIAEDESAKSLSFLRSIKRWNCNELESFPSGELATPNLVYIALWKCEKLHSLPEAMNSLAGLQELEIDNLPKLQFLVIDELPSSLQKLSVGPIGGIMWNTEPTWKHLTCLLELRINGDDVVNTLMGPLLPTSLVKLCICGLNDTSIDEKWLQHLTSLQNLEIINAPKLKSLPKKGFPSSLSVLSVARCPLLEASLRTKRGKEWRKIAHIPSIVINDELIT 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07310 1191 Pfam NB-ARC domain 150 372 IPR002182 GO:0043531
Vivi3g07310 1191 SMART LRR_typ_2 611 634 IPR003591 -
Vivi3g07310 1191 SMART LRR_typ_2 564 587 IPR003591 -
Vivi3g07310 1191 FunFam Probable disease resistance protein At1g63360 377 463 - -
Vivi3g07310 1191 Gene3D Ribonuclease Inhibitor 521 879 IPR032675 -
Vivi3g07310 1191 Gene3D - 295 376 IPR042197 -
Vivi3g07310 1191 Gene3D - 131 286 IPR027417 -
Vivi3g07310 1191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 391 IPR027417 -
Vivi3g07310 1191 PRINTS Disease resistance protein signature 170 185 - -
Vivi3g07310 1191 PRINTS Disease resistance protein signature 331 345 - -
Vivi3g07310 1191 PRINTS Disease resistance protein signature 233 247 - -
Vivi3g07310 1191 PRINTS Disease resistance protein signature 826 842 - -
Vivi3g07310 1191 SUPERFAMILY L domain-like 480 941 - -
Vivi3g07310 1191 SUPERFAMILY L domain-like 884 1174 - -
Vivi3g07310 1191 Gene3D - 377 464 IPR036388 -
Vivi3g07310 1191 PANTHER DISEASE RESISTANCE PROTEIN RP 126 862 IPR044974 GO:0006952
Vivi3g07310 1191 Gene3D Ribonuclease Inhibitor 902 1064 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07310 Vivi-Chr3 203104391 203110707 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07310 535 649 WRKY Transcription Factor Family AT4G12020 35.345 8.72e-09 58.2