Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07308 ATGGAGAACATCCATAAGGTGTTATTGGTAATGCTAATCTTCTTTTGCTCCACCATACCCACTTTCTCTAATCAGAACACTCTCACTCCAAATCAGTTTATTCAACATAATGAAACACTTGTTTCTGCAGGTGGAACCTTTGAAGCAGGATTTTTCAATTTTGGAGATCCCCAACGCCAATACTTCGGTATATGGTACAAAAGCATATTACCTAGGACTATTGTGTGGGTTGCTAATAGAGAGACTCCTGTACAAAACTCAACAGGATTGCTGAAACTAAATGATCAGGGAAATCTTGTTATTCATGATGACTCGAAAGGCGTTGTTTGGTCCTCCAATTCATCGAGAATTGTGGTGAAACCAGCTGCAGTGCAGTTGTTGGATTCAGGAAACCTTGTTGTGAAAGATGCAAACAGCACTGTGAACTTTTTTTGGGAAAGTTTTGATTATCCTGGTAACACTTTTCTTGCTGGAATGAAGCTGAAAAGTAATTTAGTAACTGGTCCATATAAATATCTCACATCTTGGAGAAGCTCTGAAGATCCTGCTGAAGGTGAATGCTCACATAGGATAGATACGCATGGTTTTCCTCAACTGGTTACTGCAAAGGGAGCAACATTTCTATATAGAGCAGGGTCATGGAATGGATTTCTTTTCACTGGTATTTCTTGGCAAAGATTGTCTAGAATCTTGAATTACTCGGTAGTGTTCACCGACAAAGAATTCTCTTATCAGTATGAAACTATGAACAGTTCAATTATTACTATAATGGTGTTAGATCCTTCCGGAAATTCACAGCGTCTTCTTTGGTCCAATAAGTCACAAGTTTGGGAGGATATAGCTAATCGTCCTGCAGACCTGTGTGATAATTATGCCTTGTGTGGTATCAACTCTAACTGCAATATTAATGACTTTCCAATATGTGAATGCCTGGAAGGTTTCATGCCAAAATTTCAAACAAAGTGGGACTCATCAAACTGGTCTGACGGGTGTGTAAGGAAAACACATTTAAACTGTCTCCGCGGAGATGGATTTTTGAAGTACACAAGCATGAAGTTGCCAGATACGTCATCATCGTGGTTTGACAAGAGCATGAGCCTTGAGAAATGCAAGACTGTGTGTTTGAAAAACTGTTCTTGCACTGCGTATGCAAATTTGGATATCAGATATGGTGGTAGTGGCTGCTTACTTTGGTTTGACAACATTGTCGACATGAGAGTTCATCCAGACCAAGGGCAAGACATTTACATAAGACTCGCATCTTCAGAATTTGATCATAAAAAGAATACGAGGAACTTGAAGCGTGCTGGGACTCTTGCAGGAGTTATTGCATTCATTATAGGACTGACCATTATTGTATTGGTCACATCAGCGTATAAAAAGAGGCTTGGATGCATAAAAGTGTTACTTCACAAGAAGGAAAAGGAAGATGTTGACTTGGCAACAATATTTGACTTTTCGACCATTGCTAATGCAACAAATCACTTCTCTAACAGAAACAAGTTAGGAGAAGGTGGTTTTGGACCAGTGTACAAGGGCATAATGGTAGATGGCCAAGAGATTGCTGTTAAGAGGCTTTCTAAAACATCAGGACAAGGAACTGAGGAATTCAAAAATGAAGTATTGTTGATGGCAACACTTCAACACCGTAATCTTGTAAAACTTCTTGGTTGTTCTATACAACAAGATGAAAAGTTATTGATCTACGAATTCATGCCCAACAAAAGCCTGGATTGCTTTATTTTTGATGCCACACGAAGTAAATTACTAGATTGGAGAAAGCGCTTAGAAATTATTGATGGGATTGCTCGGGGTCTGCTGTATCTCCATCAGGATTCTACGCTAAGAATCATACATAGAGATCTCAAAACCAGCAATATTCTTCTTGATATTGATATGATCCCAAAGATTTCAGATTTCGGTTTAGCGAGATCATTTATGGGAGACCAAGCTGAGGCTAATACAAATAGAGTGATGGGAACATATGGATATATGCCTCCAGAATATGCAGTGCGTGGATCCTTCTCAATAAAATCTGATGTTTTTAGCTTTGGAGTTGTTGTACTTGAGATAATTAGCGGTAAGAAGAATAGCGGATTTGATGACCCTCAAAATCATCTAAACCTTCTTGGGCATGCATGGAGACTATGGATTGAAGAAAGGCCACATGAGTTCATAGCTGATATATCTTATGATGCGGATATCTGTTCAGAAATAATAAGATTTATTCATGTTGGTCTATTGTGTGTACAACAGCAACCCGAAAATAGGCCTAACATGTCATCCGTAGTTTTTATGTTAAAAGGTGAAAAATTACTCCCCAAACCAAGTGAGCCCGGGTTCTATGGAGGAAGAGATGATATAAATAACACAGGATCTTCTTCAAAGGGTTGTTCAATAAATGAAGCTTCGATGTCATTGTTAGAGGGCCGATAG 2436 0.3888 MENIHKVLLVMLIFFCSTIPTFSNQNTLTPNQFIQHNETLVSAGGTFEAGFFNFGDPQRQYFGIWYKSILPRTIVWVANRETPVQNSTGLLKLNDQGNLVIHDDSKGVVWSSNSSRIVVKPAAVQLLDSGNLVVKDANSTVNFFWESFDYPGNTFLAGMKLKSNLVTGPYKYLTSWRSSEDPAEGECSHRIDTHGFPQLVTAKGATFLYRAGSWNGFLFTGISWQRLSRILNYSVVFTDKEFSYQYETMNSSIITIMVLDPSGNSQRLLWSNKSQVWEDIANRPADLCDNYALCGINSNCNINDFPICECLEGFMPKFQTKWDSSNWSDGCVRKTHLNCLRGDGFLKYTSMKLPDTSSSWFDKSMSLEKCKTVCLKNCSCTAYANLDIRYGGSGCLLWFDNIVDMRVHPDQGQDIYIRLASSEFDHKKNTRNLKRAGTLAGVIAFIIGLTIIVLVTSAYKKRLGCIKVLLHKKEKEDVDLATIFDFSTIANATNHFSNRNKLGEGGFGPVYKGIMVDGQEIAVKRLSKTSGQGTEEFKNEVLLMATLQHRNLVKLLGCSIQQDEKLLIYEFMPNKSLDCFIFDATRSKLLDWRKRLEIIDGIARGLLYLHQDSTLRIIHRDLKTSNILLDIDMIPKISDFGLARSFMGDQAEANTNRVMGTYGYMPPEYAVRGSFSIKSDVFSFGVVVLEIISGKKNSGFDDPQNHLNLLGHAWRLWIEERPHEFIADISYDADICSEIIRFIHVGLLCVQQQPENRPNMSSVVFMLKGEKLLPKPSEPGFYGGRDDINNTGSSSKGCSINEASMSLLEGR 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07308 811 ProSiteProfiles Protein kinase domain profile. 496 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07308 811 Pfam PAN-like domain 339 405 IPR003609 -
Vivi3g07308 811 SMART ntp_6 340 419 IPR003609 -
Vivi3g07308 811 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Vivi3g07308 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 572 775 - -
Vivi3g07308 811 CDD STKc_IRAK 502 769 - -
Vivi3g07308 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 462 571 - -
Vivi3g07308 811 CDD PAN_AP_plant 335 420 - -
Vivi3g07308 811 Gene3D Phosphorylase Kinase; domain 1 470 571 - -
Vivi3g07308 811 CDD B_lectin 37 151 IPR001480 -
Vivi3g07308 811 Gene3D - 21 148 IPR036426 -
Vivi3g07308 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Vivi3g07308 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Vivi3g07308 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 338 419 - -
Vivi3g07308 811 PIRSF SRK 1 811 IPR024171 GO:0004674
Vivi3g07308 811 Gene3D Transferase(Phosphotransferase) domain 1 572 773 - -
Vivi3g07308 811 SUPERFAMILY Protein kinase-like (PK-like) 481 767 IPR011009 -
Vivi3g07308 811 Pfam Protein tyrosine and serine/threonine kinase 499 764 IPR001245 GO:0004672|GO:0006468
Vivi3g07308 811 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Vivi3g07308 811 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 758 - -
Vivi3g07308 811 SMART blect_4 31 151 IPR001480 -
Vivi3g07308 811 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Vivi3g07308 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 148 - -
Vivi3g07308 811 SMART serkin_6 496 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07308 811 Pfam D-mannose binding lectin 73 177 IPR001480 -
Vivi3g07308 811 Gene3D Hepatocyte Growth Factor 336 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07308 Vivi-Chr3 202928372 202934019 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07308 427 782 Receptor kinase-like Gene Family AT4G23190 51.482 4.52e-117 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi3g07308 PK_Tyr_Ser-Thr 5.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07308 - - vvo:131659752 1374.38