Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07307 ATGGAGAACATCCATAAGGTGTTATTGGTAATGCTAATCTTCTTTTGCTCCACCATACCCACTTTCTCTAATCAGAACACTCTCACTCCAAATCAGTTTATTCAACATAATGAAACACTTGTTTCTGCAGGTGGAACCTTTGAAGCAGGATTTTTCAATTTTGGAGATCCCCAACGCCAATACTTCGGTATATGGTACAAAAGCATATTACCTAGGACTATTGTGTGGGTTGCTAATAGAGAGACTCCTGTACAAAACTCAACAGGATTGCTGAAACTAAATGATCAGGGAAATCTTGTTATTCATGATGACTCGAAAGGCGTTGTTTGGTCCTCCAATTCATCGAGAATTGTGGTGAAACCAGCTGCAGTGCAGTTGTTGGATTCAGGAAACCTTGTTGTGAAAGATGCAAACAGCACTGTGAACTTTTTTTGGGAAAGTTTTGATTATCCTGGTAACACTTTTCTTGCTGGAATGAAGCTGAAAAGTAATTTAGTAACTGGTCCATATAAATATCTCACATCTTGGAGAAGCTCTGAAGATCCTGCTGAAGGTGAATGCTCACATAGGATAGATACGCATGGTTTTCCTCAACTGGTTACTGCAAAGGGAGCAACATTTCTATATAGAGCAGGGTCATGGAATGGATTTCTTTTCACTGGTATTTCTTGGCAAAGATTGTCTAGAATCTTGAATTACTCGGTAGTGTTCACCGACAAAGAATTCTCTTATCAGTATGAAACTATGAACAGTTCAATTATTACTATAATGGTGTTAGATCCTTCCGGAAATTCACAGCGTCTTCTTTGGTCCAATAAGTCACAAGTTTGGGAGGATATAGCTAATCGTCCTGCAGACCTGTGTGATAATTATGCCTTGTGTGGTATCAACTCTAACTGCAATATTAATGACTTTCCAATATGTGAATGCCTGGAAGGTTTCATGCCAAAATTTCAAACAAAGTGGGACTCATCAAACTGGTCTGACGGGTGTGTAAGGAAAACACATTTAAACTGTCTCCGCGGAGATGGATTTTTGAAGTACACAAGCATGAAGTTGCCAGATACGTCATCATCGTGGTTTGACAAGAGCATGAGCCTTGAGAAATGCAAGACTGTGTGTTTGAAAAACTGTTCTTGCACTGCGTATGCAAATTTGGATATCAGATATGGTGGTAGTGGCTGCTTACTTTGGTTTGACAACATTGTCGACATGAGAGTTCATCCAGACCAAGGGCAAGACATTTACATAAGACTCGCATCTTCAGAATTTGATCATAAAAAGAATACGAGGAACTTGAAGCGTGCTGGGACTCTTGCAGGAGTTATTGCATTCATTATAGGACTGACCATTATTGTATTGGTCACATCAGCGTATAAAAAGAGGCTTGGTAAGCCAGGATGCATAAAAGTGTTACTTCACAAGAAGGAAAAGGAAGATGTTGACTTGGCAACAATATTTGACTTTTCGACCATTGCTAATGCAACAAATCACTTCTCTAACAGAAACAAGTTAGGAGAAGGTGGTTTTGGACCAGTGTACAAGGGCATAATGGTAGATGGCCAAGAGATTGCTGTTAAGAGGCTTTCTAAAACATCAGGACAAGGAACTGAGGAATTCAAAAATGAAGTATTGTTGATGGCAACACTTCAACACCGTAATCTTGTAAAACTTCTTGGTTGTTCTATACAACAAGATGAAAAGTTATTGATCTACGAATTCATGCCCAACAAAAGCCTGGATTGCTTTATTTTTGATGCCACACGAAGTAAATTACTAGATTGGAGAAAGCGCTTAGAAATTATTGATGGGATTGCTCGGGGTCTGCTGTATCTCCATCAGGATTCTACGCTAAGAATCATACATAGAGATCTCAAAACCAGCAATATTCTTCTTGATATTGATATGATCCCAAAGATTTCAGATTTCGGTTTAGCGAGATCATTTATGGGAGACCAAGCTGAGGCTAATACAAATAGAGTGATGGGAACATATGGATATATGCCTCCAGAATATGCAGTGCGTGGATCCTTCTCAATAAAATCTGATGTTTTTAGCTTTGGAGTTGTTGTACTTGAGATAATTAGCGGTAAGAAGAATAGCGGATTTGATGACCCTCAAAATCATCTAAACCTTCTTGGGCATGCATGGAGACTATGGATTGAAGAAAGGCCACATGAGTTCATAGCTGATATATCTTATGATGCGGATATCTGTTCAGAAATAATAAGATTTATTCATGTTGGTCTATTGTGTGTACAACAGCAACCCGAAAATAGGCCTAACATGTCATCCGTAGTTTTTATGTTAAAAGGTGAAAAATTACTCCCCAAACCAAGTGAGCCCGGGTTCTATGGAGGAAGAGATGATATAAATAACACAGGATCTTCTTCAAAGGGTTGTTCAATAAATGAAGCTTCGATGTCATTGTTAGAGGGCCGATAG 2445 0.3894 MENIHKVLLVMLIFFCSTIPTFSNQNTLTPNQFIQHNETLVSAGGTFEAGFFNFGDPQRQYFGIWYKSILPRTIVWVANRETPVQNSTGLLKLNDQGNLVIHDDSKGVVWSSNSSRIVVKPAAVQLLDSGNLVVKDANSTVNFFWESFDYPGNTFLAGMKLKSNLVTGPYKYLTSWRSSEDPAEGECSHRIDTHGFPQLVTAKGATFLYRAGSWNGFLFTGISWQRLSRILNYSVVFTDKEFSYQYETMNSSIITIMVLDPSGNSQRLLWSNKSQVWEDIANRPADLCDNYALCGINSNCNINDFPICECLEGFMPKFQTKWDSSNWSDGCVRKTHLNCLRGDGFLKYTSMKLPDTSSSWFDKSMSLEKCKTVCLKNCSCTAYANLDIRYGGSGCLLWFDNIVDMRVHPDQGQDIYIRLASSEFDHKKNTRNLKRAGTLAGVIAFIIGLTIIVLVTSAYKKRLGKPGCIKVLLHKKEKEDVDLATIFDFSTIANATNHFSNRNKLGEGGFGPVYKGIMVDGQEIAVKRLSKTSGQGTEEFKNEVLLMATLQHRNLVKLLGCSIQQDEKLLIYEFMPNKSLDCFIFDATRSKLLDWRKRLEIIDGIARGLLYLHQDSTLRIIHRDLKTSNILLDIDMIPKISDFGLARSFMGDQAEANTNRVMGTYGYMPPEYAVRGSFSIKSDVFSFGVVVLEIISGKKNSGFDDPQNHLNLLGHAWRLWIEERPHEFIADISYDADICSEIIRFIHVGLLCVQQQPENRPNMSSVVFMLKGEKLLPKPSEPGFYGGRDDINNTGSSSKGCSINEASMSLLEGR 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07307 814 Pfam PAN-like domain 339 405 IPR003609 -
Vivi3g07307 814 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 761 - -
Vivi3g07307 814 SMART ntp_6 340 419 IPR003609 -
Vivi3g07307 814 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Vivi3g07307 814 Gene3D Transferase(Phosphotransferase) domain 1 575 776 - -
Vivi3g07307 814 CDD PAN_AP_plant 335 420 - -
Vivi3g07307 814 PIRSF SRK 1 814 IPR024171 GO:0004674
Vivi3g07307 814 CDD B_lectin 37 151 IPR001480 -
Vivi3g07307 814 Gene3D - 21 148 IPR036426 -
Vivi3g07307 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Vivi3g07307 814 CDD STKc_IRAK 505 772 - -
Vivi3g07307 814 SMART serkin_6 499 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07307 814 Gene3D Phosphorylase Kinase; domain 1 473 574 - -
Vivi3g07307 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 338 419 - -
Vivi3g07307 814 Pfam Protein tyrosine and serine/threonine kinase 502 767 IPR001245 GO:0004672|GO:0006468
Vivi3g07307 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 469 574 - -
Vivi3g07307 814 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Vivi3g07307 814 SUPERFAMILY Protein kinase-like (PK-like) 484 770 IPR011009 -
Vivi3g07307 814 SMART blect_4 31 151 IPR001480 -
Vivi3g07307 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Vivi3g07307 814 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Vivi3g07307 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 148 - -
Vivi3g07307 814 ProSiteProfiles Protein kinase domain profile. 499 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07307 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 778 - -
Vivi3g07307 814 Pfam D-mannose binding lectin 73 177 IPR001480 -
Vivi3g07307 814 Gene3D Hepatocyte Growth Factor 336 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07307 Vivi-Chr3 202928372 202934020 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07307 427 785 Receptor kinase-like Gene Family AT4G23190 51.070 1.60e-116 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi3g07307 PK_Tyr_Ser-Thr 5.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07307 - - vvo:131659752 1368.99