Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07306 ATGGTGAAACCAGTTGTTGCGCAGTTGTTGGATTCAGGAAACCTTATTGTGAAAGACGCGAACAGCAGCGTTAAGAATAAGGATTTTGTTTGGGAGAGTTTTGATTATCCCGGTAACACTTTCCTTGCTGGAATGAAGCTGGAAAGTAATTTAGTTACTGGTCCGTATAGATATATCAGATCATGGAAAAGTCCTGATGATCCTTCAGACGGTGAGTTTTCGTATCAGATAGATACGTGTGGCTTTCCACAGCTGGTTACTGCAAAGGGAGGAAGTTTACTCTATAGATCAGGTTCATGGAATGGTTTTCTTTTCACTGGAATTTCGTGGCCAATGCATAGAATCTATAATCTCTTTTTTGTGTTCGACGACAAGGAAGTCTCTTATCGATATGAAACTTTGAACCGTTCGATTATTTCTAGAACGGTGCTAGATCCATATGGAACTTCACAGCGCTTTATATGGTCTGATGAGTCACAGGTTTGGAAGGCGACAGTTACTCGTCCGGTAGACCAGTGTGATGATTATGCCTTATGCGGTATCAACTCTAACTGCAATATTAATGACATCCAAATGTGTGAGTGCTTGGATGGTTTTACACCGAAAATTCAAGCGAAATGGGATTCGTCTGATTGGTCTGGCGGGTGTGTAAGGAGAACGAAACTGAATTGTCTCAACGGAGATGGATTTCTGAAGTACACAAACATGAAATTGCCAGACACTTCGGCTTCCTGGTTTAACAGGAGCTTGAGCCTCGAGGAATGTAAGACAGTGTGTTTGAAAAACTGTTCTTGCGTTGCATACGCAAATTTAGATATCAGAAATGGTGGGAGTGGCTGCTTACTTTGGTTTCATAGTATTGTCGACATGAGAAAACACTTAGATCGAGGACAAGACATTTACATTCGACTCGCATTTTCTGAACTAGATCATACAAAGAATAAGATGAACTTGGGTACGAAGCTTGCTGCGATTTTCTTAGGGGTTATGGCATTCATCATAGGACTTACAGTTCTTCTATTGGTGACATCAACATTTAGGAAGAAGCTTGGGTGTATAAGAAAGTTGATTCCATGGAGCCACAAGAAGGAGAAGAAAGAGGAAGATTTTCCAACAGTATTTGATTTTTCAACCATCATTAATGTCACGGATAACTTCTCTTACCAAAACAAGTTAGGAGAAGGTGGCTTTGGGCCGGTATATAAGGGCGTATTGGCGGATGGACAAGAGATTGCTGTTAAGAGGCTTGCGGAAACATCAGGGCAAGGAACTAAGGAGTTCAAGAATGAAGTGAAGTTAATGGCAACACTTCAACACCGTAATCTTGTAAAACTTCTTGGTTGTTCTATTCATCAAGATGAAAAGTTGTTGATCTATGAATTCATGCCTAACAGAAGCTTGGATTACTTTATTTTTGATACTACGCGAAGTAAGTTACTGGATTGGAGAAAGCGCTTGGAAATTATCGATGGGATTGCTCGGGGGCTGCTGTATCTCCACCAAGATTCTACGTTAAGAATCATACATAGAGATCTCAAGACAAGCAATATTCTTCTTGATATTGATATGATCCCAAAGATATCAGATTTTGGTTTAGCCAGATCATTTATGGGAGACCATGCCGAGGCTAACACAAATAGAGTGATGGGAACATATGGATATATGCCTCCAGAATATGCAGTGCACGGATATTTCTCAACAAAATCGGATGTTTTTAGCTTTGGAGTCGTTGTGCTTGAGATAATTAGTGGTAGGAAGAATCGCGGATTTTGTGACCCTCAACATCATCTAAACCTTCTTGGTCATGCATGGAGACTATGGATTGAAGAAAGGCCAGAGGAGTTAATGGCCGACACATTATATGATGAGGCCATAAGTTCAGAAATATTAAGATTTATTCATGTGGGACTATTGTGTGTACAACGGAAACCGGAAAATAGGCCTAACATGTCATCTGTGATTTTTATGTTAAAGGGTGAAAAGTTACTCCCGAAACCATGTGAGCCTGGGTTCTACGATGGAAGAGACTATACAAATAGCACAGGATCTACTTCAAAGGGGTGTTCAATAAATGAAGCTTCAATCTCATTGTTAGAAGCTCGATAG 2106 0.4031 MVKPVVAQLLDSGNLIVKDANSSVKNKDFVWESFDYPGNTFLAGMKLESNLVTGPYRYIRSWKSPDDPSDGEFSYQIDTCGFPQLVTAKGGSLLYRSGSWNGFLFTGISWPMHRIYNLFFVFDDKEVSYRYETLNRSIISRTVLDPYGTSQRFIWSDESQVWKATVTRPVDQCDDYALCGINSNCNINDIQMCECLDGFTPKIQAKWDSSDWSGGCVRRTKLNCLNGDGFLKYTNMKLPDTSASWFNRSLSLEECKTVCLKNCSCVAYANLDIRNGGSGCLLWFHSIVDMRKHLDRGQDIYIRLAFSELDHTKNKMNLGTKLAAIFLGVMAFIIGLTVLLLVTSTFRKKLGCIRKLIPWSHKKEKKEEDFPTVFDFSTIINVTDNFSYQNKLGEGGFGPVYKGVLADGQEIAVKRLAETSGQGTKEFKNEVKLMATLQHRNLVKLLGCSIHQDEKLLIYEFMPNRSLDYFIFDTTRSKLLDWRKRLEIIDGIARGLLYLHQDSTLRIIHRDLKTSNILLDIDMIPKISDFGLARSFMGDHAEANTNRVMGTYGYMPPEYAVHGYFSTKSDVFSFGVVVLEIISGRKNRGFCDPQHHLNLLGHAWRLWIEERPEELMADTLYDEAISSEILRFIHVGLLCVQRKPENRPNMSSVIFMLKGEKLLPKPCEPGFYDGRDYTNSTGSTSKGCSINEASISLLEAR 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07306 701 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 354 461 - -
Vivi3g07306 701 SMART ntp_6 225 304 IPR003609 -
Vivi3g07306 701 PIRSF SRK 2 701 IPR024171 GO:0004674
Vivi3g07306 701 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 462 665 - -
Vivi3g07306 701 SUPERFAMILY Protein kinase-like (PK-like) 369 657 IPR011009 -
Vivi3g07306 701 SMART serkin_6 386 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07306 701 Pfam S-locus glycoprotein domain 95 202 IPR000858 GO:0048544
Vivi3g07306 701 CDD PAN_AP_plant 220 305 - -
Vivi3g07306 701 Gene3D Transferase(Phosphotransferase) domain 1 462 663 - -
Vivi3g07306 701 ProSiteProfiles Protein kinase domain profile. 386 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07306 701 Pfam PAN-like domain 224 290 IPR003609 -
Vivi3g07306 701 SUPERFAMILY alpha-D-mannose-specific plant lectins 4 68 IPR036426 -
Vivi3g07306 701 ProSiteProfiles PAN/Apple domain profile. 224 305 IPR003609 -
Vivi3g07306 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 507 519 IPR008271 GO:0004672|GO:0006468
Vivi3g07306 701 Gene3D Phosphorylase Kinase; domain 1 354 461 - -
Vivi3g07306 701 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 223 304 - -
Vivi3g07306 701 Pfam D-mannose binding lectin 4 63 IPR001480 -
Vivi3g07306 701 Pfam Protein tyrosine and serine/threonine kinase 388 654 IPR001245 GO:0004672|GO:0006468
Vivi3g07306 701 Gene3D Hepatocyte Growth Factor 221 303 - -
Vivi3g07306 701 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 6 647 - -
Vivi3g07306 701 CDD STKc_IRAK 392 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07306 Vivi-Chr3 202908713 202912194 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07306 363 701 Receptor kinase-like Gene Family AT4G11480 51.549 3.41e-116 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi3g07306 PK_Tyr_Ser-Thr 5.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07306 - - vvo:131659752 1118.99