Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07303 ATGGTGAAACCAGTTGTTGTATTGTTGTTGGATTCTGGAAACCTTGTTGTGAAAGATGCAAACAGCAGTGGGAATTTTCTTTGGGAAAGTGTTGATTATCCGGGTAACACTTTCCTTGCTGGAATGAAGCTGAAAAGTAATTTAGTTACTGGTCCATATAAATATCTCACATCTTGGAGAAGCCCCGAAGATCCTGCTGAAGGCGAGTATTCATATAGGATAGATACACATGGTTTTCCTCAGCTGGTTACTGCAAAAGGAGCAACGTTTCTGTCTAGAGCAGGTTCATGGAATGGATTTCTTTTCACTGGTGTTTCTTGGCAAAGAATGCATAAATTCTTGAATTTCTCAGTAGTGTTCACTGACAAAGAAATCGCTTATCAATATGAAACTATGAACAGTTCAATTATTACTAAAATGGTGCTCGATCCAGATGGAAAGTCACAACGTACACTATGGTTAGATAGTGAACATATTTGGGAGATTATAGTTGCTCGTCCTGCAGACCAGTGTGATTATTATTCGTTGTGTGGTATCAACTCTAACTGCAATGTTGATAACTTTCCAATATGTGAATGCTTGGAAGGTTTCACGCCAAAATTTCAACCAAAATGGGAGTCATCGAATTGGTCTGATGGGTGTGTAAGGAAAACACATTTAAATTGTCTCCATGGAGATGGATTTTTGAAATACCCAAGCATGAAGTTGCCAGATACGTCATCATCATGGTTTGACAAGAGCTTGAGCCTTGAGGAATGCAAGACAATGTGTTTGAAAAATTGTTCTTGCACTGCATATGCAAATTTAGATATCAGAGATGATGGGAGTGGCTGCTTACATTGGTTTAACAACATTGTGGACATGAGAAAACATCCAGAGCAAGGGCAAGACGTTTACATTCGGCTGGCATCTTCAGAACTTGATCATATAAAGAATAAGAGGAACTTGAAGCTTGCTGGGACTCTTGCAGGAGTTATTGCATTCATTATAGGACTATCTGTTCTTGTATTGGTCACATCAGTATATAGAAAGAAGTTTGGGTATATAAACAAATTATTTCACCGGAAGCACAAAATGGAGACGGAAGACGGTGAGTTGGCTACAATATTTGATTTTTCGACCATCACTAATGCAACAAATAACTTCTCTGACAGAAACAAGTTAGGAGAAGGTGGTTTTGGAACAGTGTACAAGGGCTTAATGGTAGATGGCCAAGAGATTGCTGTAAAGAGGCTTTCAAAAACATCGGGACAAGGAGCCGAGGAGTTCAAAAATGAAGTAAAGTTGATGGCAACACTTCAACACCGTAATCTTGTAAAACTTCTTGGTTGTTCTATTCAACAAGATGAGAAGTTGTTGATATATGAATTCATGCCCAACAAAAGCTTGGATTGCTTTATTTTTGATACTATGCAAAGCAAATTACTAACTTGGACCAAGCGCTTGGAAATTATTGATGGGATTGCTCGAGGGCTGTTGTATCTCCATCAAGATTCTACACTAAGAATCATACATAGAGATCTCAAGACAAGCAATATTCTTCTTGATATTGATATGATCCCAAAGATATCAGATTTTGGTTTAGCCAGATCATTTATGGGAGACCAAGCTGAGGCGAATACAAATAGAGTGATGGGAACATATGGGTATATGCCTCCAGAATATGCAGTGCATGGATATTTCTCAATAAAATCAGATGTTTTTAGCTTTGGAGTCGTTGTACTTGAGATAATTAGCGGTAGGAAGAATCGCAGATTTTGTGACCCTATACACCATCTAAACCTTCTTGGTCATGCATGGAGACTATGGGTTGAAGAAAGGCCACATGAGTTAATAGCTGATATATCCTATGATGCGGATATATATTCAGAAATAATAAGATTTATTCATGTGGCTCTATTGTGTGTACAAGAGAAACCAGAAAACAGACCTAACATGTCATCTGTGGTTTTTATGTTAAAGGGTGAAAAGATACTCCCAAAACCTAGTGAACCTGGGTTCTATGCTGGAAAAGATAATACAAATAGCACAGGATCTTCTTCAAAAGGTTGTTCACTAAACGAAGCTTCAATCTCATTGTTAGAGGCCCGATAA 2094 0.3816 MVKPVVVLLLDSGNLVVKDANSSGNFLWESVDYPGNTFLAGMKLKSNLVTGPYKYLTSWRSPEDPAEGEYSYRIDTHGFPQLVTAKGATFLSRAGSWNGFLFTGVSWQRMHKFLNFSVVFTDKEIAYQYETMNSSIITKMVLDPDGKSQRTLWLDSEHIWEIIVARPADQCDYYSLCGINSNCNVDNFPICECLEGFTPKFQPKWESSNWSDGCVRKTHLNCLHGDGFLKYPSMKLPDTSSSWFDKSLSLEECKTMCLKNCSCTAYANLDIRDDGSGCLHWFNNIVDMRKHPEQGQDVYIRLASSELDHIKNKRNLKLAGTLAGVIAFIIGLSVLVLVTSVYRKKFGYINKLFHRKHKMETEDGELATIFDFSTITNATNNFSDRNKLGEGGFGTVYKGLMVDGQEIAVKRLSKTSGQGAEEFKNEVKLMATLQHRNLVKLLGCSIQQDEKLLIYEFMPNKSLDCFIFDTMQSKLLTWTKRLEIIDGIARGLLYLHQDSTLRIIHRDLKTSNILLDIDMIPKISDFGLARSFMGDQAEANTNRVMGTYGYMPPEYAVHGYFSIKSDVFSFGVVVLEIISGRKNRRFCDPIHHLNLLGHAWRLWVEERPHELIADISYDADIYSEIIRFIHVALLCVQEKPENRPNMSSVVFMLKGEKILPKPSEPGFYAGKDNTNSTGSSSKGCSLNEASISLLEAR 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07303 697 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 221 302 - -
Vivi3g07303 697 Gene3D Phosphorylase Kinase; domain 1 354 457 - -
Vivi3g07303 697 ProSiteProfiles PAN/Apple domain profile. 222 303 IPR003609 -
Vivi3g07303 697 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 348 457 - -
Vivi3g07303 697 CDD STKc_IRAK 388 655 - -
Vivi3g07303 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
Vivi3g07303 697 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 458 661 - -
Vivi3g07303 697 SMART serkin_6 382 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07303 697 SUPERFAMILY alpha-D-mannose-specific plant lectins 4 65 IPR036426 -
Vivi3g07303 697 Pfam Protein tyrosine and serine/threonine kinase 386 650 IPR001245 GO:0004672|GO:0006468
Vivi3g07303 697 Gene3D Transferase(Phosphotransferase) domain 1 458 661 - -
Vivi3g07303 697 ProSitePatterns Protein kinases ATP-binding region signature. 388 410 IPR017441 GO:0005524
Vivi3g07303 697 Pfam PAN-like domain 222 288 IPR003609 -
Vivi3g07303 697 SUPERFAMILY Protein kinase-like (PK-like) 367 653 IPR011009 -
Vivi3g07303 697 Gene3D Hepatocyte Growth Factor 219 304 - -
Vivi3g07303 697 ProSiteProfiles Protein kinase domain profile. 382 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07303 697 Pfam D-mannose binding lectin 5 60 IPR001480 -
Vivi3g07303 697 PIRSF SRK 2 697 IPR024171 GO:0004674
Vivi3g07303 697 SMART ntp_6 223 302 IPR003609 -
Vivi3g07303 697 CDD PAN_AP_plant 218 303 - -
Vivi3g07303 697 Pfam S-locus glycoprotein domain 93 201 IPR000858 GO:0048544
Vivi3g07303 697 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07303 Vivi-Chr3 202873577 202877569 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07303 370 667 Receptor kinase-like Gene Family AT4G23230 58.528 1.00e-117 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi3g07303 PK_Tyr_Ser-Thr 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07303 - - vvo:131659752 1402.5