Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07302 ATGGAGAACCATAATAAGGTGCTAATGCTAATTGTGTGTACTTTCCTCTTTTGCTCCATGCCCATTTTTTCTAAACAGAACGCATTTACTACTATTGCTCCAAGTCAGTTTATCCAATATCCTGAAACAATTGTTTCTGCAGCTGGAACCTTTGAAGCAGGCTTTTTCGACTTTGGAGATACACAACGCCAATACTTTGGTATATGGTACAAGAGCATATTACCTAGGATTATTGTGTGGGTTGCCAATAGAAATACCCCTGTACGAAACTCAACAGGATTGCTGAAACTCAATGATCAGGGAACTCTTGTTATTCTCGATGGCTCCAAACGCATCATCTGGTCCTCCAATTCGTCAAGAAAAATGGTGAAACCAGTTGTTGTATTGTTGTTGGATTCTGGAAACCTTGTTGTGAAAGATGCAAACAGCAGTGGGAATTTTCTTTGGGAAAGTGTTGATTATCCGGGTAACACTTTCCTTGCTGGAATGAAGCTGAAAAGTAATTTAGTTACTGGTCCATATAAATATCTCACATCTTGGAGAAGCCCCGAAGATCCTGCTGAAGGCGAGTATTCATATAGGATAGATACACATGGTTTTCCTCAGCTGGTTACTGCAAAAGGAGCAACGTTTCTGTCTAGAGCAGGTTCATGGAATGGATTTCTTTTCACTGGTGTTTCTTGGCAAAGAATGCATAAATTCTTGAATTTCTCAGTAGTGTTCACTGACAAAGAAATCGCTTATCAATATGAAACTATGAACAGTTCAATTATTACTAAAATGGTGCTCGATCCAGATGGAAAGTCACAACGTACACTATGGTTAGATAGTGAACATATTTGGGAGATTATAGTTGCTCGTCCTGCAGACCAGTGTGATTATTATTCGTTGTGTGGTATCAACTCTAACTGCAATGTTGATAACTTTCCAATATGTGAATGCTTGGAAGGTTTCACGCCAAAATTTCAACCAAAATGGGAGTCATCGAATTGGTCTGATGGGTGTGTAAGGAAAACACATTTAAATTGTCTCCATGGAGATGGATTTTTGAAATACCCAAGCATGAAGTTGCCAGATACGTCATCATCATGGTTTGACAAGAGCTTGAGCCTTGAGGAATGCAAGACAATGTGTTTGAAAAATTGTTCTTGCACTGCATATGCAAATTTAGATATCAGAGATGATGGGAGTGGCTGCTTACATTGGTTTAACAACATTGTGGACATGAGAAAACATCCAGAGCAAGGGCAAGACGTTTACATTCGGCTGGCATCTTCAGAACTTGATCATATAAAGAATAAGAGGAACTTGAAGCTTGCTGGGACTCTTGCAGGAGTTATTGCATTCATTATAGGACTATCTGTTCTTGTATTGGTCACATCAGTATATAGAAAGAAGTTTGGGTATATAAACAAATTATTTCACCGGAAGCACAAAATGGAGACGGAAGACGGTGAGTTGGCTACAATATTTGATTTTTCGACCATCACTAATGCAACAAATAACTTCTCTGACAGAAACAAGTTAGGAGAAGGTGGTTTTGGAACAGTGTACAAGGGCTTAATGGTAGATGGCCAAGAGATTGCTGTAAAGAGGCTTTCAAAAACATCGGGACAAGGAGCCGAGGAGTTCAAAAATGAAGTAAAGTTGATGGCAACACTTCAACACCGTAATCTTGTAAAACTTCTTGGTTGTTCTATTCAACAAGATGAGAAGTTGTTGATATATGAATTCATGCCCAACAAAAGCTTGGATTGCTTTATTTTTGATACTATGCAAAGCAAATTACTAACTTGGACCAAGCGCTTGGAAATTATTGATGGGATTGCTCGAGGGCTGTTGTATCTCCATCAAGATTCTACACTAAGAATCATACATAGAGATCTCAAGACAAGCAATATTCTTCTTGATATTGATATGATCCCAAAGATATCAGATTTTGGTTTAGCCAGATCATTTATGGGAGACCAAGCTGAGGCGAATACAAATAGAGTGATGGGAACATATGGGTATATGCCTCCAGAATATGCAGTGCATGGATATTTCTCAATAAAATCAGATGTTTTTAGCTTTGGAGTCGTTGTACTTGAGATAATTAGCGGTAGGAAGAATCGCAGATTTTGTGACCCTATACACCATCTAAACCTTCTTGGTCATGCATGGAGACTATGGGTTGAAGAAAGGCCACATGAGTTAATAGCTGATATATCCTATGATGCGGATATATATTCAGAAATAATAAGATTTATTCATGTGGCTCTATTGTGTGTACAAGAGAAACCAGAAAACAGACCTAACATGTCATCTGTGGTTTTTATGTTAAAGGGTGAAAAGATACTCCCAAAACCTAGTGAACCTGGGTTCTATGCTGGAAAAGATAATACAAATAGCACAGGATCTTCTTCAAAAGGTTGTTCACTAAACGAAGCTTCAATCTCATTGTTAGAGGCCCGATAA 2457 0.3842 MENHNKVLMLIVCTFLFCSMPIFSKQNAFTTIAPSQFIQYPETIVSAAGTFEAGFFDFGDTQRQYFGIWYKSILPRIIVWVANRNTPVRNSTGLLKLNDQGTLVILDGSKRIIWSSNSSRKMVKPVVVLLLDSGNLVVKDANSSGNFLWESVDYPGNTFLAGMKLKSNLVTGPYKYLTSWRSPEDPAEGEYSYRIDTHGFPQLVTAKGATFLSRAGSWNGFLFTGVSWQRMHKFLNFSVVFTDKEIAYQYETMNSSIITKMVLDPDGKSQRTLWLDSEHIWEIIVARPADQCDYYSLCGINSNCNVDNFPICECLEGFTPKFQPKWESSNWSDGCVRKTHLNCLHGDGFLKYPSMKLPDTSSSWFDKSLSLEECKTMCLKNCSCTAYANLDIRDDGSGCLHWFNNIVDMRKHPEQGQDVYIRLASSELDHIKNKRNLKLAGTLAGVIAFIIGLSVLVLVTSVYRKKFGYINKLFHRKHKMETEDGELATIFDFSTITNATNNFSDRNKLGEGGFGTVYKGLMVDGQEIAVKRLSKTSGQGAEEFKNEVKLMATLQHRNLVKLLGCSIQQDEKLLIYEFMPNKSLDCFIFDTMQSKLLTWTKRLEIIDGIARGLLYLHQDSTLRIIHRDLKTSNILLDIDMIPKISDFGLARSFMGDQAEANTNRVMGTYGYMPPEYAVHGYFSIKSDVFSFGVVVLEIISGRKNRRFCDPIHHLNLLGHAWRLWVEERPHELIADISYDADIYSEIIRFIHVALLCVQEKPENRPNMSSVVFMLKGEKILPKPSEPGFYAGKDNTNSTGSSSKGCSLNEASISLLEAR 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07302 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 782 - -
Vivi3g07302 818 Pfam PAN-like domain 343 409 IPR003609 -
Vivi3g07302 818 CDD STKc_IRAK 509 776 - -
Vivi3g07302 818 ProSiteProfiles PAN/Apple domain profile. 343 424 IPR003609 -
Vivi3g07302 818 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
Vivi3g07302 818 Pfam D-mannose binding lectin 78 181 IPR001480 -
Vivi3g07302 818 SMART ntp_6 344 423 IPR003609 -
Vivi3g07302 818 CDD PAN_AP_plant 339 424 - -
Vivi3g07302 818 Pfam Protein tyrosine and serine/threonine kinase 507 771 IPR001245 GO:0004672|GO:0006468
Vivi3g07302 818 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 765 - -
Vivi3g07302 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 186 IPR036426 -
Vivi3g07302 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Vivi3g07302 818 ProSiteProfiles Bulb-type lectin domain profile. 29 151 IPR001480 -
Vivi3g07302 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 469 578 - -
Vivi3g07302 818 ProSiteProfiles Protein kinase domain profile. 503 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07302 818 Pfam S-locus glycoprotein domain 214 322 IPR000858 GO:0048544
Vivi3g07302 818 PIRSF SRK 2 818 IPR024171 GO:0004674
Vivi3g07302 818 Gene3D Phosphorylase Kinase; domain 1 475 578 - -
Vivi3g07302 818 Gene3D Hepatocyte Growth Factor 340 425 - -
Vivi3g07302 818 SUPERFAMILY Protein kinase-like (PK-like) 488 774 IPR011009 -
Vivi3g07302 818 Gene3D Transferase(Phosphotransferase) domain 1 579 782 - -
Vivi3g07302 818 Gene3D - 24 153 IPR036426 -
Vivi3g07302 818 SMART blect_4 35 155 IPR001480 -
Vivi3g07302 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 342 423 - -
Vivi3g07302 818 CDD B_lectin 42 155 IPR001480 -
Vivi3g07302 818 SMART serkin_6 503 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07302 Vivi-Chr3 202873573 202877569 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07302 491 788 Receptor kinase-like Gene Family AT4G23230 58.528 1.22e-116 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi3g07302 PK_Tyr_Ser-Thr 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07302 - - vvo:131659752 1632.85