Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07301 ATGCAAATATACATGGTTCTCTTGCTAATGCTTCACACTTTCTTCTGTTTTATTATTCCCACTTTATCTATACAATATGAAACTTTTACTACTAATAGACCAAATCATTCTATCCAAGGTAATGAGACTTTGATATCTTCTGCTGGAACTTTTGAAGCTGGATTCTTCAACTTTGCAAATTCGCAATTCCAATACTATGGTATATGGTACAAAACCATATCACCTAGAACTTATGTTTGGATTGCCAATAGAGATTCTCCGATACAAAACTCAACACCGAATCTGAAACTAACATATCAAGGAACTCTTATTATTGTTGATGATTCTGGAAGGATCATATGGTCCTCCAATGCATCAACAATTGCAGAGAAACCGGTCTTGAAACCGGTCTTGTCGCTTTTAGATTCAGGAAACCTTGTTGTGAAAGATGGAGAGAAGATTTTGTGGGAGAGTTTTGATTACCCTGGTGACACTTTTCTTGCAGGAATGAAACTTAAGACAAATTTACTTAATGGTACTTTTAGGTCTCTAACGTCTTGGAAAAGTGTTGAAGATCCTTCTTCAGGTGAGTTTTCTTATCACATAGATGTTCATGGATTTCCTCAACTGGTTACTACAAAGGGAAAAGTTTTATTTAGTAGAGGTGGATCATGGAATGGTTATGCTTTTGGTGGAGTTTCATGGCTAAGGAATCTTAAACTATTCAAATTTTCTTTAGTGTTCAATGATAAAGAAGTTTCTTATGAGTATGAAACTTTGAAAAATGAAACTATTACTAGATTATGGCTTAATCCATCAGGTTTTGCTCAAAGACTGGTATGGTCAGATAGTGGAGGAGATTGGGAGATTATATCGACTCGTCCAATGGATCAGTGTGAATATTATTCAAGCTGTGATGCTAATTCTGTTTGTAATATTACAAACTCTCCAAGAACATGTCAATGCTTGGAAGGTTTTGTACCGAAATATTACAAAAAGTGGAATTCTTTGGATTGGTCTGGTGGATGTATTAGACGAATAACATTAAACTGTATCGGAGATGAATTTCTAAAGCATTCAGGAGTAGAGTTGCCAGATACATCAAATTCTTGGTTCGATAAGAGCTTGAGTCTTGAGGAATGTCAGAAAATGTGTTTGAAAAACTGTTCTTGTTCAGCATATGCGAATTTAGATGTTAAAAGTAATAGTGGTTGTTTGCTTTGGTTTGGCAAGATAAGGGACTTGACAAAACATATCGATCAAGGACAAGATATTTTCATAAGACTTGCTGCTTCTGATTTAGATCATAGAAGAAATAAATGGAGCTTTAACAACAAGAAACTTGCAGGGGCACTTGGAGGAATCATTTTATTTGTCATGATTCTTGGATTGGTCACATTTACATACAAAAAGAGGAAGAAGCTTGCAGAGCCAGGGATGCTAAAAATATTTCATAGAAAGTGCAAAAGGGAGAAGGAAGATGTGCAACTATCAACAATATTTTGTTTTACAACCATATCTAAAGCCACAAATCATTTTTCAGACGGTAACAAGATAGGACAAGGTGGTTTTGGACCGGTATACAAGGGCGTATTGGAAGATGGGTTAGAGATTGCGGTGAAGAGGCTATCCGAAAATTCAGAACAAGGAGAAGAACAGTTTAAAAACGAAGTTATGTTGATGGCGAAGCTTCAGCACCGTAATCTTGTAAAACTTCTTGGTTGTTCAATTTATCAAGAGGAAAAGCTTTTGATCTATGAATTGATGCCCAACAGAAGCTTGGATTATTTCATTTTTGATTCAACGCGAAAGGAAAAATTAGATCTGACAAAACGGTTCCAAATTATTGATGGAATTGCTCGAGGGTTGATGTATCTTCATCAAGACTCTAGATTAAGAATCATCCATAGAGATCTGAAAACAAGTAATATTCTTCTAGATAATGATATGAATCCAAGAATATCCGATTTTGGTCTAGCTAGAACATTTAGAGGAGATCAAGATGAATCCAAAACAAATAGACTGATGGGAACATATGGTTATATGCCACCTGAATACGCGGTTCATGGATCTTATTCAATCAAATCAGATGTATTTAGCTTTGGTGTAATTGTTCTGGAGATAATTAGTGGGAGAAAGAATCGAAACTTTTATGACCATCATCACAATCTTAATCTTCTTGGTCATGCATGGAGACTATGGAATGAAGATAAGGCACAAGAATTAATAGATGACTTATTCCATGGAACAACAATTCCATGTGAAATGTTGAGATGTATTCATGTTGGTCTACTATGTGTGCAACAAACACCACAACATAGACCAAACATGTCATCTGTAGTCTTAATGTTGAATGGTGAAAATTTGTTGCCTGAACCTAGCGAACCCGGGTTTTATTCCAGATCAGTTCATCATCCGATTCAGGTAGAATCGTCTTCAAGAAGTTGTGAAGAGTGTTCACAAAATGAAGCTACTATGTCATTGTTAGAGGCGCGATAA 2478 0.3575 MQIYMVLLLMLHTFFCFIIPTLSIQYETFTTNRPNHSIQGNETLISSAGTFEAGFFNFANSQFQYYGIWYKTISPRTYVWIANRDSPIQNSTPNLKLTYQGTLIIVDDSGRIIWSSNASTIAEKPVLKPVLSLLDSGNLVVKDGEKILWESFDYPGDTFLAGMKLKTNLLNGTFRSLTSWKSVEDPSSGEFSYHIDVHGFPQLVTTKGKVLFSRGGSWNGYAFGGVSWLRNLKLFKFSLVFNDKEVSYEYETLKNETITRLWLNPSGFAQRLVWSDSGGDWEIISTRPMDQCEYYSSCDANSVCNITNSPRTCQCLEGFVPKYYKKWNSLDWSGGCIRRITLNCIGDEFLKHSGVELPDTSNSWFDKSLSLEECQKMCLKNCSCSAYANLDVKSNSGCLLWFGKIRDLTKHIDQGQDIFIRLAASDLDHRRNKWSFNNKKLAGALGGIILFVMILGLVTFTYKKRKKLAEPGMLKIFHRKCKREKEDVQLSTIFCFTTISKATNHFSDGNKIGQGGFGPVYKGVLEDGLEIAVKRLSENSEQGEEQFKNEVMLMAKLQHRNLVKLLGCSIYQEEKLLIYELMPNRSLDYFIFDSTRKEKLDLTKRFQIIDGIARGLMYLHQDSRLRIIHRDLKTSNILLDNDMNPRISDFGLARTFRGDQDESKTNRLMGTYGYMPPEYAVHGSYSIKSDVFSFGVIVLEIISGRKNRNFYDHHHNLNLLGHAWRLWNEDKAQELIDDLFHGTTIPCEMLRCIHVGLLCVQQTPQHRPNMSSVVLMLNGENLLPEPSEPGFYSRSVHHPIQVESSSRSCEECSQNEATMSLLEAR 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07301 825 ProSiteProfiles PAN/Apple domain profile. 344 423 IPR003609 -
Vivi3g07301 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Vivi3g07301 825 CDD PAN_AP_plant 341 423 - -
Vivi3g07301 825 Gene3D Transferase(Phosphotransferase) domain 1 582 783 - -
Vivi3g07301 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 471 581 - -
Vivi3g07301 825 Gene3D - 27 152 IPR036426 -
Vivi3g07301 825 Pfam S-locus glycoprotein domain 214 322 IPR000858 GO:0048544
Vivi3g07301 825 CDD STKc_IRAK 512 779 - -
Vivi3g07301 825 ProSiteProfiles Protein kinase domain profile. 506 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07301 825 Pfam PAN-like domain 346 407 IPR003609 -
Vivi3g07301 825 SMART ntp_6 344 422 IPR003609 -
Vivi3g07301 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 185 IPR036426 -
Vivi3g07301 825 PIRSF SRK 1 825 IPR024171 GO:0004674
Vivi3g07301 825 SMART blect_4 35 155 IPR001480 -
Vivi3g07301 825 Pfam D-mannose binding lectin 77 181 IPR001480 -
Vivi3g07301 825 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 768 - -
Vivi3g07301 825 SMART serkin_6 506 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07301 825 CDD B_lectin 35 155 IPR001480 -
Vivi3g07301 825 Gene3D Phosphorylase Kinase; domain 1 473 581 - -
Vivi3g07301 825 ProSiteProfiles Bulb-type lectin domain profile. 29 154 IPR001480 -
Vivi3g07301 825 CDD TM_EGFR-like 441 470 - -
Vivi3g07301 825 SUPERFAMILY Protein kinase-like (PK-like) 490 805 IPR011009 -
Vivi3g07301 825 Pfam Protein tyrosine and serine/threonine kinase 509 775 IPR001245 GO:0004672|GO:0006468
Vivi3g07301 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 582 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07301 Vivi-Chr3 202869747 202873445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07301 435 795 Receptor kinase-like Gene Family AT4G23230 50.689 3.00e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi3g07301 PK_Tyr_Ser-Thr 3.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07301 - - vvo:131659752 1636.7