Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07292 ATGGGGAACTGCAACGCGTGTTTAAAGTCAGACGTAGTCGGTTCAGACCGGAAATCAACCGACCCGAACCGGGGTAAAAAAGGAAGAAAAACCAAACCGAACCCATACTCCGACGAATCGTTAAACTCATCAGCAACGATTCGTGTTCTAAAGGATTCAAATCCGCGAAACCGAATCGGAGATAAATATATACTAGGCCGTGAGCTCGGTCGCGGTGAATTCGGTATAACGTATCTATGTACGGACAAAGAGACGAAGCAGGAGTTGGCTTGCAAGTCGATTTCGAAGAGGAAGTTGAGGACGGCGGTGGATGTGGAGGATGTTCGGCGGGAGGCGGCGATCATGGCGACGTTGCCGGAGCATCCGAATATTGTGAAGCTGAAGGCGACTTATGAGGATGATGAGAATGTTCATCTTGTTATGGAGTTGTGTGAAGGGGGTGAGTTGTTTGATAGGATTGTTGCGAGGGGGCATTATAGTGAACGCGCTGCGGCGAATGTTGCGAGGACTATTGCGGAAGTTGTGAGGATGTGTCATGCGAATGGGGTTGTGCATAGGGATCTTAAGCCGGAGAATTTTCTTTTTGCTAATAAGAAGGAGAATTCTCCGCTTAAAGCTATTGATTTTGGCCTCTCTGTTTTCTTCAAGCCTGGTATTGTTTTGTATTCTATTGTTTATTGTTAA 684 0.4664 MGNCNACLKSDVVGSDRKSTDPNRGKKGRKTKPNPYSDESLNSSATIRVLKDSNPRNRIGDKYILGRELGRGEFGITYLCTDKETKQELACKSISKRKLRTAVDVEDVRREAAIMATLPEHPNIVKLKATYEDDENVHLVMELCEGGELFDRIVARGHYSERAAANVARTIAEVVRMCHANGVVHRDLKPENFLFANKKENSPLKAIDFGLSVFFKPGIVLYSIVYC 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07292 227 Pfam Protein kinase domain 65 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07292 227 FunFam Calcium-dependent protein kinase 1 65 148 - -
Vivi3g07292 227 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Vivi3g07292 227 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Vivi3g07292 227 MobiDBLite consensus disorder prediction 14 34 - -
Vivi3g07292 227 ProSiteProfiles Protein kinase domain profile. 63 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07292 227 Gene3D Transferase(Phosphotransferase) domain 1 149 221 - -
Vivi3g07292 227 SUPERFAMILY Protein kinase-like (PK-like) 59 223 IPR011009 -
Vivi3g07292 227 PANTHER SERINE/THREONINE-PROTEIN KINASE 51 217 - -
Vivi3g07292 227 Gene3D Phosphorylase Kinase; domain 1 64 148 - -
Vivi3g07292 227 MobiDBLite consensus disorder prediction 9 44 - -
Vivi3g07292 227 SMART serkin_6 63 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07292 Vivi-Chr3 202714286 202715364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07292 1 225 EF-hand Containing Proteins AT1G74740 72.414 8.36e-113 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Vivi3g07292 Pkinase 1.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07292 K13412 - gmx:100779935 365.155