Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07273 ATGGTAGTTCATTTATGGATTGCAGCAGGCTTACTTGAATCATCGTCCACAGATCAAGAAAAAGTTGGAGAAGAATACTTTGATGAACTAGTGTCAAGGTCATTGATACATCGGTGGTCTATTGGTGATGAGGAAATAAACTTTGGAATGCACAACTTCATCCATGATTTTACTACAGAAGTTTATTCTTTATATTGTATCGGTAGGGACAAACATAACCTAGATGATAGGATGCAAAATTTCTCATACAATATAGGGAGATATGATTCATATCACAAATTTGATAAAATATACAGAGTAAAAGGTCTGCGTACCTTTCTAGCATTCCCATTACAAGAACAATTGCCTCTTGGTTTGCTATCTAACAAGGTAGTGCATGACTTGCTGCCAAAAATGAAACAATTACGCATGCTGTCTCTGTCAAGCTACAAGAGTATCACCAAGGTTCCCAAGTCTATTGGAAATTTGTTAGACCTGCGGTACTTAAATCTTTCTCACACTAATATTGAAAGGCTCCCTTCTGAAACGTGCAGGCTTTACCATCTGCAGTTCTTGTTGTTGGCAGGCTGTGCAAGGTTCACCGAATTGCCGGAGGACATGGGAAAATTGATTAATCTGCAGTACCTTGACGTTAGTAACACCGCATTGAGAGAGATGCCCGTACAAATAGCCAAACTAGAAAATCTTCACACTTTGTCCGACTTTGTTGTTAGCAAACATAATGGTGGATTGAATATTGCAGAGCTAGGAAAACTTCCCCACCTACATGGAAAACTTTCAATCTCCCAGCTACAAAATGTTAATGACCCCTTTGAAGTAGATAGAGCCAATATAAAGATGAAAGAAAAAATAGACGAGTTATCTTTGGAATGGGATTGTAGTAGTGCTTTTCAAGATTCACAAATTAAAAGTGTTGTACTTGAAAAGTTGCAACCCTCAACGAATTTGAAAAGTCTCACCATCAAAGGCTATGGTGGAATCAGCTTCCCAAATTGGTTAGGTGATTCTTTATTTAGCAACATGGTGCATTTAAGGATCTCGAATTGTAATGATTGTTTAGGGCTTCCATCCCTTGGAAAATTGGGTAATCTGAAAGAACTCGTTGTTGAAGGGATGCAATCAGTGGAGACAATTGGTATTGAGTTCTATGGATGTGGGGATTCTTCGTTTCAACCATTTCCCTCTTTGGAGAGTCTACACTTTGAGAATATGCAAGAGTGGAAGGAATGGGACTTGATTGGAGATACGGCTACAACGTTTCCTAATCTAAAAACTTTATCGCTAAGAAAGTGCCAGAAACTGATAGCTGGAAACATAACTGAAAAATTTCCTTTCTTACCTGAACTTGAGTTAAAAGAATGTCCTTTACTGGTGCAATCAATGCCATTATCTGATCATGTATTCAGGCAAATGATGTTCCCTTTGAATCTTCTTCAACAATTGACCATAGACGGCATTCCATCTTCAATGTCTTTTCCAACAAATGGTCTACAAAAAACCTTGAAATTTCTGATAATCAGTAACTGTGAAAATCTAGAGTTCCTTCCTCGTGAATACTTGTCCAATTACACATCGCTTAAAGAATTGAAAATATCTTATAGCTGCAATTCAATGACATCATTTACCTTGGGTGCTCTCCCTGTCCTCAAGAGTCTGTTTATTGAGGGTTGTAACAATCTGAAATCAATATCAATTGCAGAAGATGTGTCACTAAAGAGTCTCTCATTTCTTAGAAGCATCAAAATATGGGATTGTAATGAATTGGAGTCATTTACCCTAGGTGGATTGGCCACTCCAAATCTTCGCTTTATTGCAATGTGGAAGTGTGAGAAGCTTCATTCACTACCAGAAGCAATGAACAGTCTAGCTGACCTTCGAGAAATGGAAATTGATAATCTACCTAACCTTCAATCTTTAGTCATAAATGAGTTGCCCAGTAGTTTACAGAAACTATCTGTTGGCTCTGTTGGTGGGATTATGTGGAATACTGAGCCAAGTTGGGAACATCTCACTTGTCTTTCAGTGTTGCGAATTAACGGTGATGATACGGTGAACATGTTGATGGGGCCATTGCTACCTACATCGCTTGTGAAATTGTGCATTTGTGGTCTCAATGATACAAGCATCGATGAGAAGTGGCTTCAGCATCTCACTTCTCTTCGAAAACTTGAGATTATTAACGCTCCCAAACTCAAGTTGTTGCCAAAGAAAGGATTTCCTTCCTCTCTTTCTGTACTAAGTGTGACTCGTTGTCCATTATTGGAAGCAATTTGCGGAAAAAATGGGGGAAAGAATGGCGTAAGATTGCTCACATTCCCTCCATAA 2325 0.3858 MVVHLWIAAGLLESSSTDQEKVGEEYFDELVSRSLIHRWSIGDEEINFGMHNFIHDFTTEVYSLYCIGRDKHNLDDRMQNFSYNIGRYDSYHKFDKIYRVKGLRTFLAFPLQEQLPLGLLSNKVVHDLLPKMKQLRMLSLSSYKSITKVPKSIGNLLDLRYLNLSHTNIERLPSETCRLYHLQFLLLAGCARFTELPEDMGKLINLQYLDVSNTALREMPVQIAKLENLHTLSDFVVSKHNGGLNIAELGKLPHLHGKLSISQLQNVNDPFEVDRANIKMKEKIDELSLEWDCSSAFQDSQIKSVVLEKLQPSTNLKSLTIKGYGGISFPNWLGDSLFSNMVHLRISNCNDCLGLPSLGKLGNLKELVVEGMQSVETIGIEFYGCGDSSFQPFPSLESLHFENMQEWKEWDLIGDTATTFPNLKTLSLRKCQKLIAGNITEKFPFLPELELKECPLLVQSMPLSDHVFRQMMFPLNLLQQLTIDGIPSSMSFPTNGLQKTLKFLIISNCENLEFLPREYLSNYTSLKELKISYSCNSMTSFTLGALPVLKSLFIEGCNNLKSISIAEDVSLKSLSFLRSIKIWDCNELESFTLGGLATPNLRFIAMWKCEKLHSLPEAMNSLADLREMEIDNLPNLQSLVINELPSSLQKLSVGSVGGIMWNTEPSWEHLTCLSVLRINGDDTVNMLMGPLLPTSLVKLCICGLNDTSIDEKWLQHLTSLRKLEIINAPKLKLLPKKGFPSSLSVLSVTRCPLLEAICGKNGGKNGVRLLTFPP 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07273 774 Gene3D Ribonuclease Inhibitor 496 654 IPR032675 -
Vivi3g07273 774 ProSiteProfiles Leucine-rich repeat profile. 158 179 IPR001611 GO:0005515
Vivi3g07273 774 SUPERFAMILY L domain-like 114 488 - -
Vivi3g07273 774 SMART LRR_typ_2 156 179 IPR003591 -
Vivi3g07273 774 SMART LRR_typ_2 203 226 IPR003591 -
Vivi3g07273 774 Gene3D Ribonuclease Inhibitor 113 470 IPR032675 -
Vivi3g07273 774 SUPERFAMILY L domain-like 475 756 - -
Vivi3g07273 774 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 478 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07273 Vivi-Chr3 202167691 202179567 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07273 127 241 WRKY Transcription Factor Family AT4G12020 32.759 1.64e-08 56.6