Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07260 ATGATCCACTTGATAACATACTTAACCGTCTCTTGTTTCACATGTCAACGTAGACTTACAAAAAAAATCAAAGAGTTTTGTTCACATTTCTTTCCAAAGCTATTCTTCTTCTTCTTCTTACAAACAAAGCAAATAATGGATGTTATTCAGAAAGAAACTCTTTTGTCACTCTCAAATTCTGTGAAGCTTTCGTTACAAAAGATTGTTTCTACGGAGCTCGTCGAAAACTTTGAGACGATGAATTTTGACGTTTCACTCTTGAAAAAGGTGCAGAAAACACTGGTGGATCTTGAAGATCTACTTTATCATGCTAGCAACAAACTCATCCCGTGTCAAGGTTCAAGTTCAGGAGAACAACTTGGTGATGATGATGAATCTTCTATTTATGGAAGAGACGCTGATATTCAGAAACTTATACATCTTTTGTTTTCTAGTGATAGTGATGGTGATAGTAAAATTAGAGTGATTTCTATTGTCGGTATGGGAGGGATTGGTAAAACAGCCCTTGCTAAACACCTTTACAATCTTCCTCTAGTTAATGACAAATTTCAGTTAAAACTATGGGCAGATTTCTCAAGTGATGTTGATGATTTTAGTGTTTTTGAAAACATTCTTCAATCTATTACTTCACAAACAACCATTAACGATATGAATACCGTTTACCCAAATTTTTTGCTGGTATTGGATGGTGTGTGGGATGAAAGATTTGTCAATTGGACATTACTCATGGATATCTTGAATGTTGGGGAAACACAGAGTAGAATCATTGTCACAACACGAGATGAAAGAGTTGCAATATCCATGAAAACCTTTCTTTCTCTCCACTATTTGAGACCCTTGAAAGATGAAGATTGTTGGACTTTACTTGCCAAACATGCATTTGGAGAAAATGACTACCATCGACAACACTATCTAAACGAAACTGTTGCATATGAAAGAGAAGTGCGAGAAATAATTGGCAGGAAAATTGCAAAAAAGTGTGATGGTTTACCATTAGCTGCTGTAGAACACGGGGCTCTTCTTCCCACTTCATCATTGAAACCATATGAATGGTATTATGTGCTAGACAGTCATCTTCAGAAAACACCTTACAATGTGCTAGCCTCTCTCAAGTTGAGCTACTATTGCCTTTCTGATCCTTTAAAACTGTGTTTTCAATATTGTTCAAGTTTTCCGAAGAAGTCCATTTTAGAAAAAAAGATGGTAGTTCAGTTATGGATTGCAGCAGGGTTACTAGAATCATTGTCCATAAATCAAGAAAAAGTTGGAGAAGAATACTTTGATGAACTAGTTTCAAGGTCATTGATACATCGGCGGTCTATTGGTGATGAGGAAAGAAACTTTGGAATGCACAACTTCATCCATGATTTAGCTACGGAGGTTTCATCTCCACAGGTTTCTTCTTCATACTGTATCGATCTGGACAAACATAACCTAGATGACAGGATGCAAAATTTCTCATACAATAGAGGGACATATGATTCATATCACAAATTTGATAAATTATACAGAGTAAAAGGTTTGCGTACCTTTCTAGCATTCCCATTACAAGCACAATTGCCTCTTTGTTTGCTATCAAACAAGGTAGTGCATGACTTGCTGCCAACAATGAAACAATTACGCATGTTGTCTCTGTCAAGCTACAAGAATATCACCAAGGTTCCCAAGTCTATTGGAAATTTGTTAGACCTGCGATACTTAAATCTTTCTCACACTAGTATTGAAAGGCTGCCTTCTGAAACATGCAAGCTTTACCATCTGCAGTTCTTGTTGTTAGCAGGCTGTAAAAGGCTCACTGAATTGCCAGAGGACATGGGAAAATTGATTAATTTGCGCCACCTTGACGTTAGTAACACCGCATTGTGGGAGATGCCTGTACAAATAGCCAAACTAGAAAATCTCCACACTTTGTCTGACTTTGTTGTCAGCAAACACAATGGTGGATTAAATATCGCAGATCTAGGAAAACTTCCCCACCTACGTGGAAAACTTTCAATCTCACAGCTACAAAATGTTAATGACTCCTTTGAAGTAGATCAAGCCAATATAAAGATGAAAGAACAAATAAATGAGTTAGCTATGGAATGGGATTGTGGTAGTACTTATTTAGATTCACAGATTCAAAGTGTTGTACTTGAAAAGTTGCGACCCTCAACAAATTTGAAAAGTCTCACCATCAAAGGCTATGGTGGAATCAACTTTCCAAATTGGTTAGGTGATTTTTTATTTAGCAACATGGTGTGTTTAAGGATCTCGAATTGTAATGATTGTTTATGGCTTCCACCTCTTGGACAATTGGATAATTTGAAAGAACTCATTATTGAAGGGATGCAATCAGTGGAGACAATTGGTATTGAGTTCTATGGAAGTGTTGGCTCTTCATTTCAACCATTTCCCTCTTTGCAGATTCTACACTTTTTGAATATGCAAGAGTGGAAGGAATGGGACTTGATTGGAGGCACGACTACAACGTTTCCTAATCTAAAAACTTTATCACTAAGAAAGTGCCCAAAACTGATAGTCGGAAATATAACTGAAATTTTTTCATTCTTAACTGAACTTGAGTTAAGAGAATGTCCTTTATTGGTGCAATCAATTTCATTATCTGATCATGTATTTGGGCAACTGATGTTCCCTCTGTATTCTCTTCAACAGCTGACCATAGACGATTTTCCATCCCTGATGTCGTTCCCAACAGACGGTCTACCAAAAACCTTGAAACTTCTCATAATCAGTAACTGTGAGAATCTAGAATTCCTTCCTCATGATAACTTGCATAATTATACATCGCTTGAGGAATTGAAAATATCTCATAGCTGTAATTCAATGATATCATTTCCCTTAGGCACTCTCCCTGTCCTCAAAAGTCTGTTTATTGAAGGTTGTAAAAATCTGAAATCGATATTAATTGCAGAAGACGGGTCGGAAAAGAGTCTTTCATTTCTTAGAAGCATCAAAATATGGGATTGTAATGAATTGGATTCATTTCCCTCAGGTGGATTGAAAACTCCAAACCTTGTTTATATAGCACTGTGGAAGTGTGAGAAGCTTCCTTCACTGCCAGAAGCAATGAACAGTCTATCTGGCCTTCATGAAATGGAAATTGATAACTTACCAAATCTTCAATCTTTTGTCATAGATGAGTTACCTAGCAGTTTACGGAAACTGTCTGTTGGCTTTGTTGGTGGGATTAGGTGGAATACTGGGCCAACTTGGAAACATCTCACTTGTCTCTCGGAGTTGCGAATTAATGGCGATGATATGTTGAACACGCTGATGGGGCCATTGCTACCTAAAAAGCTTGTGAAATTGTGCATTTGTGGTCTTAATGATACAAGCATTGATGAGAAGTGGCTTCAGCATCTCGCTTATCTCGAACACCTTGAGATTATTAACGCTCCCAAACTCAAGTCGTTGCCAAAGAAAGGATTTCCTTCCTCTCTTTCAGTACTTAGTGTGACTCGCTGTCCATTACTGGAAACAAGTTTGCGGAAAAAGCGGTGGAAAAAATGGCGTAAGATTGCTCACGTTCCCTCCGTAGTTATTGATGAAGAATTGATCACATGA 3567 0.3748 MIHLITYLTVSCFTCQRRLTKKIKEFCSHFFPKLFFFFFLQTKQIMDVIQKETLLSLSNSVKLSLQKIVSTELVENFETMNFDVSLLKKVQKTLVDLEDLLYHASNKLIPCQGSSSGEQLGDDDESSIYGRDADIQKLIHLLFSSDSDGDSKIRVISIVGMGGIGKTALAKHLYNLPLVNDKFQLKLWADFSSDVDDFSVFENILQSITSQTTINDMNTVYPNFLLVLDGVWDERFVNWTLLMDILNVGETQSRIIVTTRDERVAISMKTFLSLHYLRPLKDEDCWTLLAKHAFGENDYHRQHYLNETVAYEREVREIIGRKIAKKCDGLPLAAVEHGALLPTSSLKPYEWYYVLDSHLQKTPYNVLASLKLSYYCLSDPLKLCFQYCSSFPKKSILEKKMVVQLWIAAGLLESLSINQEKVGEEYFDELVSRSLIHRRSIGDEERNFGMHNFIHDLATEVSSPQVSSSYCIDLDKHNLDDRMQNFSYNRGTYDSYHKFDKLYRVKGLRTFLAFPLQAQLPLCLLSNKVVHDLLPTMKQLRMLSLSSYKNITKVPKSIGNLLDLRYLNLSHTSIERLPSETCKLYHLQFLLLAGCKRLTELPEDMGKLINLRHLDVSNTALWEMPVQIAKLENLHTLSDFVVSKHNGGLNIADLGKLPHLRGKLSISQLQNVNDSFEVDQANIKMKEQINELAMEWDCGSTYLDSQIQSVVLEKLRPSTNLKSLTIKGYGGINFPNWLGDFLFSNMVCLRISNCNDCLWLPPLGQLDNLKELIIEGMQSVETIGIEFYGSVGSSFQPFPSLQILHFLNMQEWKEWDLIGGTTTTFPNLKTLSLRKCPKLIVGNITEIFSFLTELELRECPLLVQSISLSDHVFGQLMFPLYSLQQLTIDDFPSLMSFPTDGLPKTLKLLIISNCENLEFLPHDNLHNYTSLEELKISHSCNSMISFPLGTLPVLKSLFIEGCKNLKSILIAEDGSEKSLSFLRSIKIWDCNELDSFPSGGLKTPNLVYIALWKCEKLPSLPEAMNSLSGLHEMEIDNLPNLQSFVIDELPSSLRKLSVGFVGGIRWNTGPTWKHLTCLSELRINGDDMLNTLMGPLLPKKLVKLCICGLNDTSIDEKWLQHLAYLEHLEIINAPKLKSLPKKGFPSSLSVLSVTRCPLLETSLRKKRWKKWRKIAHVPSVVIDEELIT 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07260 1188 Gene3D - 279 373 IPR042197 -
Vivi3g07260 1188 SUPERFAMILY L domain-like 514 921 - -
Vivi3g07260 1188 Gene3D - 374 461 IPR036388 -
Vivi3g07260 1188 Gene3D Ribonuclease Inhibitor 901 1059 IPR032675 -
Vivi3g07260 1188 Pfam NB-ARC domain 133 385 IPR002182 GO:0043531
Vivi3g07260 1188 SUPERFAMILY L domain-like 876 1161 - -
Vivi3g07260 1188 SMART LRR_typ_2 608 631 IPR003591 -
Vivi3g07260 1188 SMART LRR_typ_2 561 584 IPR003591 -
Vivi3g07260 1188 Gene3D Ribonuclease Inhibitor 518 892 IPR032675 -
Vivi3g07260 1188 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 388 IPR027417 -
Vivi3g07260 1188 PANTHER DISEASE RESISTANCE PROTEIN RP 97 859 IPR044974 GO:0006952
Vivi3g07260 1188 PRINTS Disease resistance protein signature 155 170 - -
Vivi3g07260 1188 PRINTS Disease resistance protein signature 327 341 - -
Vivi3g07260 1188 PRINTS Disease resistance protein signature 218 232 - -
Vivi3g07260 1188 PRINTS Disease resistance protein signature 823 839 - -
Vivi3g07260 1188 Gene3D - 121 273 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07260 Vivi-Chr3 202054281 202064918 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07260 532 646 WRKY Transcription Factor Family AT4G12020 35.345 3.65e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07260 - - vvo:131632024 1554.27