Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07254 ATGATCCACTTGATAACATACTTAACCGTCTCTTGTTTCACATGTCAACGTAGACTTACAAAAAAAATCAAAGAGTTTTGTTCACATTTCTTTCCAAAGCTATTCTTCTTCTTCTTCTTACAAACAAAGCAAATAATGGATGTTATTCAGAAAGAAACTCTTTTGTCACTCTCAAATTCTGTGAAGCTTTCGTTACAAAAGATTGTTTCTACGGAGCTCGTCGAAAACTTTGAGACGATGAATTTTGACGTTTCACTCTTGAAAAAGGTGCAGAAAACACTGGTGGATCTTGAAGATCTACTTTATCATGCTAGCAACAAACTCATCCCGTGTCAAGGTAACAACACATCGCTCAATTTCTTGAGACATGCTGTTTTTGAAGTTGCCTATTTGCTTGACCCAGTCCCTTTTGTATGTACTGATTTGCAGCTCAAAATTCATTGTCGTTTACCTTTTCTCATTACACTGATTCAATTTAAAACTGAATATTTAATTCAAATATTAAAAGGTTCAAGTTCAGGAGAACAACTTGGTGATGATGATGAATCTTCTATTTATGGAAGAGACGCTGATATTCAGAAACTTATACATCTTTTGTTTTCTAGTGATAGTGATGGTGATAGTAAAATTAGAGTGATTTCTATTGTCGGTATGGGAGGGATTGGTAAAACAGCCCTTGCTAAACACCTTTACAATCTTCCTCTAGTTAATGACAAATTTCAGTTAAAACTATGGGCAGATTTCTCAAGTGATGTTGATGATTTTAGTGTTTTTGAAAACATTCTTCAATCTATTACTTCACAAACAACCATTAACGATATGAATACCGTTTACCCAAATTTTTTGCTGGTATTGGATGGTGTGTGGGATGAAAGATTTGTCAATTGGACATTACTCATGGATATCTTGAATGTTGGGGAAACACAGAGTAGAATCATTGTCACAACACGAGATGAAAGAGTTGCAATATCCATGAAAACCTTTCTTTCTCTCCACTATTTGAGACCCTTGAAAGATGAAGATTGTTGGACTTTACTTGCCAAACATGCATTTGGAGAAAATGACTACCATCGACAACACTATCTAAACGAAACTGTTGCATATGAAAGAGAAGTGCGAGAAATAATTGGCAGGAAAATTGCAAAAAAGTGTGATGGTTTACCATTAGCTGCTGTAGAACACGGGGCTCTTCTTCCCACTTCATCATTGAAACCATATGAATGGTATTATGTGCTAGACAGTCATCTTCAGAAAACACCTTACAATGTGCTAGCCTCTCTCAAGTTGAGCTACTATTGCCTTTCTGATCCTTTAAAACTGTGTTTTCAATATTGTTCAAGTTTTCCGAAGAAGTCCATTTTAGAAAAAAAGATGGTAGTTCAGTTATGGATTGCAGCAGGGTTACTAGAATCATTGTCCATAAATCAAGAAAAAGTTGGAGAAGAATACTTTGATGAACTAGTTTCAAGGTCATTGATACATCGGCGGTCTATTGGTGATGAGGAAAGAAACTTTGGAATGCACAACTTCATCCATGATTTAGCTACGGAGGTTTCATCTCCACAGGTTTCTTCTTCATACTGTATCGATCTGGACAAACATAACCTAGATGACAGGATGCAAAATTTCTCATACAATAGAGGGACATATGATTCATATCACAAATTTGATAAATTATACAGAGTAAAAGGTTTGCGTACCTTTCTAGCATTCCCATTACAAGCACAATTGCCTCTTTGTTTGCTATCAAACAAGGTAGTGCATGACTTGCTGCCAACAATGAAACAATTACGCATGTTGTCTCTGTCAAGCTACAAGAATATCACCAAGGTTCCCAAGTCTATTGGAAATTTGTTAGACCTGCGATACTTAAATCTTTCTCACACTAGTATTGAAAGGCTGCCTTCTGAAACATGCAAGCTTTACCATCTGCAGTTCTTGTTGTTAGCAGGCTGTAAAAGGCTCACTGAATTGCCAGAGGACATGGGAAAATTGATTAATTTGCGCCACCTTGACGTTAGTAACACCGCATTGTGGGAGATGCCTGTACAAATAGCCAAACTAGAAAATCTCCACACTTTGTCTGACTTTGTTGTCAGCAAACACAATGGTGGATTAAATATCGCAGATCTAGGAAAACTTCCCCACCTACGTGGAAAACTTTCAATCTCACAGCTACAAAATGTTAATGACTCCTTTGAAGTAGATCAAGCCAATATAAAGATGAAAGAACAAATAAATGAGTTAGCTATGGAATGGGATTGTGGTAGTACTTATTTAGATTCACAGATTCAAAGTGTTGTACTTGAAAAGTTGCGACCCTCAACAAATTTGAAAAGTCTCACCATCAAAGGCTATGGTGGAATCAACTTTCCAAATTGGTTAGGTGATTTTTTATTTAGCAACATGGTGTGTTTAAGGATCTCGAATTGTAATGATTGTTTATGGCTTCCACCTCTTGGACAATTGGATAATTTGAAAGAACTCATTATTGAAGGGATGCAATCAGTGGAGACAATTGGTATTGAGTTCTATGGAAGTGTTGGCTCTTCATTTCAACCATTTCCCTCTTTGCAGATTCTACACTTTTTGAATATGCAAGAGTGGAAGGAATGGGACTTGATTGGAGGCACGACTACAACGTTTCCTAATCTAAAAACTTTATCACTAAGAAAGTGCCCAAAACTGATAGTCGGAAATATAACTGAAATTTTTTCATTCTTAACTGAACTTGAGTTAAGAGAATGTCCTTTATTGGTGCAATCAATTTCATTATCTGATCATGTATTTGGGCAACTGATGTTCCCTCTGTATTCTCTTCAACAGCTGACCATAGACGATTTTCCATCCCTGATGTCGTTCCCAACAGACGGTCTACCAAAAACCTTGAAACTTCTCATAATCAGTAACTGTGAGAATCTAGAATTCCTTCCTCATGATAACTTGCATAATTATACATCGCTTGAGGAATTGAAAATATCTCATAGCTGTAATTCAATGATATCATTTCCCTTAGGCACTCTCCCTGTCCTCAAAAGTCTGTTTATTGAAGGTTGTAAAAATCTGAAATCGATATTAATTGCAGAAGACGGGTCGGAAAAGAGTCTTTCATTTCTTAGAAGCATCAAAATATGGGATTGTAATGAATTGGATTCATTTCCCTCAGGTGGATTGAAAACTCCAAACCTTGTTTATATAGCACTGTGGAAGTGTGAGAAGCTTCCTTCACTGCCAGAAGCAATGAACAGTCTATCTGGCCTTCATGAAATGGAAATTGATAACTTACCAAATCTTCAATCTTTTGTCATAGATGAGTTACCTAGCAGTTTACGGAAACTGTCTGTTGGCTTTGTTGGTGGGATTAGGTGGAATACTGGGCCAACTTGGAAACATCTCACTTGTCTCTCGGAGTTGCGAATTAATGGCGATGATATGTTGAACACGCTGATGGGGCCATTGCTACCTAAAAAGCTTGTGAAATTGTGCATTTGTGGTCTTAATGATACAAGCATTGATGAGAAGTGGCTTCAGCATCTCGCTTATCTCGAACACCTTGAGATTATTAACGCTCCCAAACTCAAGTCGTTGCCAAAGAAAGGATTTCCTTCCTCTCTTTCAGTACTTAGTGTGACTCGCTGTCCATTACTGGAAACAAGTTTGCGGAAAAAGCGGTGGAAAAAATGGCGTAAGATTGCTCACGTTCCCTCCGTAGTTATTGATGAAGAATTGATCACATGA 3738 0.3724 MIHLITYLTVSCFTCQRRLTKKIKEFCSHFFPKLFFFFFLQTKQIMDVIQKETLLSLSNSVKLSLQKIVSTELVENFETMNFDVSLLKKVQKTLVDLEDLLYHASNKLIPCQGNNTSLNFLRHAVFEVAYLLDPVPFVCTDLQLKIHCRLPFLITLIQFKTEYLIQILKGSSSGEQLGDDDESSIYGRDADIQKLIHLLFSSDSDGDSKIRVISIVGMGGIGKTALAKHLYNLPLVNDKFQLKLWADFSSDVDDFSVFENILQSITSQTTINDMNTVYPNFLLVLDGVWDERFVNWTLLMDILNVGETQSRIIVTTRDERVAISMKTFLSLHYLRPLKDEDCWTLLAKHAFGENDYHRQHYLNETVAYEREVREIIGRKIAKKCDGLPLAAVEHGALLPTSSLKPYEWYYVLDSHLQKTPYNVLASLKLSYYCLSDPLKLCFQYCSSFPKKSILEKKMVVQLWIAAGLLESLSINQEKVGEEYFDELVSRSLIHRRSIGDEERNFGMHNFIHDLATEVSSPQVSSSYCIDLDKHNLDDRMQNFSYNRGTYDSYHKFDKLYRVKGLRTFLAFPLQAQLPLCLLSNKVVHDLLPTMKQLRMLSLSSYKNITKVPKSIGNLLDLRYLNLSHTSIERLPSETCKLYHLQFLLLAGCKRLTELPEDMGKLINLRHLDVSNTALWEMPVQIAKLENLHTLSDFVVSKHNGGLNIADLGKLPHLRGKLSISQLQNVNDSFEVDQANIKMKEQINELAMEWDCGSTYLDSQIQSVVLEKLRPSTNLKSLTIKGYGGINFPNWLGDFLFSNMVCLRISNCNDCLWLPPLGQLDNLKELIIEGMQSVETIGIEFYGSVGSSFQPFPSLQILHFLNMQEWKEWDLIGGTTTTFPNLKTLSLRKCPKLIVGNITEIFSFLTELELRECPLLVQSISLSDHVFGQLMFPLYSLQQLTIDDFPSLMSFPTDGLPKTLKLLIISNCENLEFLPHDNLHNYTSLEELKISHSCNSMISFPLGTLPVLKSLFIEGCKNLKSILIAEDGSEKSLSFLRSIKIWDCNELDSFPSGGLKTPNLVYIALWKCEKLPSLPEAMNSLSGLHEMEIDNLPNLQSFVIDELPSSLRKLSVGFVGGIRWNTGPTWKHLTCLSELRINGDDMLNTLMGPLLPKKLVKLCICGLNDTSIDEKWLQHLAYLEHLEIINAPKLKSLPKKGFPSSLSVLSVTRCPLLETSLRKKRWKKWRKIAHVPSVVIDEELIT 1245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07254 1245 PRINTS Disease resistance protein signature 384 398 - -
Vivi3g07254 1245 PRINTS Disease resistance protein signature 880 896 - -
Vivi3g07254 1245 PRINTS Disease resistance protein signature 275 289 - -
Vivi3g07254 1245 PRINTS Disease resistance protein signature 212 227 - -
Vivi3g07254 1245 Gene3D - 336 430 IPR042197 -
Vivi3g07254 1245 Gene3D - 431 518 IPR036388 -
Vivi3g07254 1245 SUPERFAMILY L domain-like 571 995 - -
Vivi3g07254 1245 SMART LRR_typ_2 665 688 IPR003591 -
Vivi3g07254 1245 SMART LRR_typ_2 618 641 IPR003591 -
Vivi3g07254 1245 Gene3D Ribonuclease Inhibitor 937 1234 IPR032675 -
Vivi3g07254 1245 PANTHER DISEASE RESISTANCE PROTEIN RP 93 1047 IPR044974 GO:0006952
Vivi3g07254 1245 Pfam NB-ARC domain 190 442 IPR002182 GO:0043531
Vivi3g07254 1245 Gene3D Ribonuclease Inhibitor 575 930 IPR032675 -
Vivi3g07254 1245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 445 IPR027417 -
Vivi3g07254 1245 SUPERFAMILY L domain-like 933 1218 - -
Vivi3g07254 1245 Gene3D - 178 330 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07254 Vivi-Chr3 202054281 202064918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07254 589 703 WRKY Transcription Factor Family AT4G12020 35.345 4.07e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07254 - - vvo:131632024 1607.81