Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07205 ATGGAAGCCCTTGCTGTTACTGTCTTGGAAAAGTTGGGTTCTTCACTTTACAAAGAGCTTGGAATCATTTGGAATCTCAAAGAGGATATCGAAAAAATGAAGAACACGGTATCTATGATCAAATCAGTACTCCTCGATGCCGAAACCAAGGCCAATAATCATCAAGTTAGTAATTGGTTGGAGGAGCTGAAAGATGTACTTTATGATGCAGACGATTTACTAGATGATTTTTCCATTGAAGATTTGAAAGGAAAAGTGAGGGTTAGAAACAAAAAAGTAAAAAAGGTACTATGTTTCTTCTCAAAACCAAACAAAATTGCCTATAGTCATACATTAGGCCATCGAATAAAAGCAATCCAGAAGAGGCTAGATGACATTGCTAAAATGAAGCATGCATTGCAACTAACTGACCGCCCTATGGAGAATCAGATTTTATATAGGGAGCAGAGACAAACTTACTCTTTTGTGAGTAAAAATGAAGTTATTGGAAGAGACGATGAAAAGAAACGTATTAAGCGTTATCTACTTGATATCAATGCTTCAGATAATGTTTCTGTAATTCCCATAGTTGGGATTGGGGGATTAGGTAAGACTGCTCTTACTCAACTGGTCTACAATGATAACGATGTTCATAAGCATTTTGAGCTAAAAATGTGGGTGTATGTTTCTGATGAATTTGATATGAAGAAAATAGCTCAGGAGATCATCCGGGATGAAAAGAATAGTCCGATGGAGCAAGTGCAAGAACAACTTAGAGACAAAATTCGAGGGAAGAAGTTTTTGCTTGTGTTAGATGACATGTGGAACGAGGATCGTGAACTGTGGCTTAAATTGAAGAGCTTGTTCGTGGAAGGAGGAAAAGGAAGCATGATAATTGTGACAACGCGTAGTCAAACTGTGGCGAAAATAGCAGGCACACATCCACCTCTTTTCTTAGAGGGTTTGGATTCGCAAAAATCACAGGAGTTATTCTCTCGAGTGGCTTTCGGCGAGTTAAAAGAACAAAATGATTTGGAATTGGTAGCTATAGGAAGGGACATTGTTAAAAAATGTGCTGGCATCCCTCTTGCTATCAGGACTATTGGAAGCCTTTTGTTTTCTCGAAATTTGGGAAGAAGCGATTGGCTATATTTCAAGGATGTTGAGTTTTCGAAGATAGATCAAAACAATGACAAAATCTTTGCAATGCTTAAACTGAGTTACGATCATCTTCCTGCATTTCTAAAAAAATGTTTTGCATATTGTTCACTGTTTCCGAAAGGCTTTGTGTTTGAAAAAAATACTCTCATTCAGTTATGGGTAGCTGAGGGGTTCATTCAACAATCAAATGATGTTAGATGTGTAGAAGATGTTGGTCATGAGCACTTCATGAGTTTGCTGTCAATGTCCTTCTTTCAAAATATCACTATAGACGATTGTGGCGGCGTAAGTACTTGTAAAATGCATGACCTTATGCATGATCTAGCACAGCTAATAGCTGGGAGTGAATATGCAGTGGTTGAAGGAGAAGAAGCAAACATTGTAAACCGAACGCGTTATTTGTCGTCTCGTACTGCATTACAGTTCGGACCACCGTCACCATGTTCCTACAAATTAAGGACATTGCATTTACATCCACAAATGAATAATTCAAGCAATTATTTGCGCTTTTCCTTTTCAGGCCTAAAGTTCTTACGTGTGTTGACACTTTGTGGGTTGAAAATTTCCGCAATCTCAAATAGTATTGAAGAGATGAAGCATTTAAGATACATTGATCTATCACAGAATGTTGCACTTAAAGAACTTCCGCCGGGCATTACCATCCTGCAGAACTTGCAAACTCTAAAACTTTCTGAATGTTCAAAGCTCGAAATATTACCAGAAAATCTCAATAAAAGTCTCCGGCATCTTGAGTTGAATGGTTGTGTGAAATTGAAATGTATGCCACAAGGGATAGCACAGTTGACAAATCTTCAAACACTAACACTTTTTGTAGTGAGAAATAAAAGTGTAAATGAATTGGGTGGTTTAATCAACCTCAGAGGGAGATTAGAAATAAAAGGGTTGGATTTCCTACGAAATAATGTAGCAGATATTGAAAAAGTACTTCTTGAAAAGCAACACCTTCAAGAATTGGAATTGCGGTGGGCCTACGACGATGGTTTTGATGAGAATTTTCAAACATGCCCAGTATTGCCCGACAGGGCCGAACAAGAAAACGAAAACTGGGTGGAAGATGAGATGATTTTACAAGCTCTGCAATCACACCACTCGCTTCAGAAACTAATTATAGATGGATTTTGCGGCAAAAGATTACCAGATTGGATAGGGAATCTCCCATCGCTCTTGACTCTTGAGATCTACAATTGCCCTGGTTTGACATCACTGCCCGAATCAATTTGTAGACAGGTATCTTTGCAGAAACTTTCCATTTGTAATTGCTTCTCATTAGAGAAAAGATACGGAAGAGCATTTGGTATAGACTGGCCCAAAATCTCTCACATCCGAAAAGTTGAGATCCTTCCTATGAAACCATTGTTTTTTAAGTACTTTTCTTGA 2538 0.3814 MEALAVTVLEKLGSSLYKELGIIWNLKEDIEKMKNTVSMIKSVLLDAETKANNHQVSNWLEELKDVLYDADDLLDDFSIEDLKGKVRVRNKKVKKVLCFFSKPNKIAYSHTLGHRIKAIQKRLDDIAKMKHALQLTDRPMENQILYREQRQTYSFVSKNEVIGRDDEKKRIKRYLLDINASDNVSVIPIVGIGGLGKTALTQLVYNDNDVHKHFELKMWVYVSDEFDMKKIAQEIIRDEKNSPMEQVQEQLRDKIRGKKFLLVLDDMWNEDRELWLKLKSLFVEGGKGSMIIVTTRSQTVAKIAGTHPPLFLEGLDSQKSQELFSRVAFGELKEQNDLELVAIGRDIVKKCAGIPLAIRTIGSLLFSRNLGRSDWLYFKDVEFSKIDQNNDKIFAMLKLSYDHLPAFLKKCFAYCSLFPKGFVFEKNTLIQLWVAEGFIQQSNDVRCVEDVGHEHFMSLLSMSFFQNITIDDCGGVSTCKMHDLMHDLAQLIAGSEYAVVEGEEANIVNRTRYLSSRTALQFGPPSPCSYKLRTLHLHPQMNNSSNYLRFSFSGLKFLRVLTLCGLKISAISNSIEEMKHLRYIDLSQNVALKELPPGITILQNLQTLKLSECSKLEILPENLNKSLRHLELNGCVKLKCMPQGIAQLTNLQTLTLFVVRNKSVNELGGLINLRGRLEIKGLDFLRNNVADIEKVLLEKQHLQELELRWAYDDGFDENFQTCPVLPDRAEQENENWVEDEMILQALQSHHSLQKLIIDGFCGKRLPDWIGNLPSLLTLEIYNCPGLTSLPESICRQVSLQKLSICNCFSLEKRYGRAFGIDWPKISHIRKVEILPMKPLFFKYFS 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07205 845 Gene3D - 6 134 - -
Vivi3g07205 845 PANTHER DISEASE RESISTANCE PROTEIN RP 35 804 IPR044974 GO:0006952
Vivi3g07205 845 FunFam Probable disease resistance protein At1g63360 401 491 - -
Vivi3g07205 845 Pfam NB-ARC domain 165 402 IPR002182 GO:0043531
Vivi3g07205 845 SUPERFAMILY L domain-like 480 809 - -
Vivi3g07205 845 Gene3D Ribonuclease Inhibitor 513 667 IPR032675 -
Vivi3g07205 845 Gene3D Ribonuclease Inhibitor 668 834 IPR032675 -
Vivi3g07205 845 FunFam Probable disease resistance protein At1g61300 145 309 - -
Vivi3g07205 845 PRINTS Disease resistance protein signature 600 616 - -
Vivi3g07205 845 PRINTS Disease resistance protein signature 254 268 - -
Vivi3g07205 845 PRINTS Disease resistance protein signature 351 365 - -
Vivi3g07205 845 PRINTS Disease resistance protein signature 186 201 - -
Vivi3g07205 845 Gene3D - 314 400 IPR042197 -
Vivi3g07205 845 Gene3D - 143 307 IPR027417 -
Vivi3g07205 845 Gene3D - 401 491 IPR036388 -
Vivi3g07205 845 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 415 IPR027417 -
Vivi3g07205 845 Pfam Rx N-terminal domain 7 91 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07205 Vivi-Chr3 200255620 200259790 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07205 183 656 WRKY Transcription Factor Family AT5G45050 22.414 5.55e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07205 - - mtr:11424880 1073.54