Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07204 ATGCTACTCAACTTTTCACTTCTACAATACAATTCTTCATTCTGTTTCTTCATTCCTCTTTTCAAACCAGATACATCAAATACAACTGTTGATTGTTTTATTAAGCCAATTCAGTTGATAGCTGTGCACGTACATCAAATACAACTGTTGATTCTGTTTCTTGATTCAGATTTCGAAACCAGGATGGAAGCCCTTGCTGTTACTGTCTTGGAAAAGTTGGGTTCTTCACTTTACAAAGAGCTTGGAATCATTTGGAATCTCAAAGAGGATATCGAAAAAATGAAGAACACGGTATCTATGATCAAATCAGTACTCCTCGATGCCGAAACCAAGGCCAATAATCATCAAGTTAGTAATTGGTTGGAGGAGCTGAAAGATGTACTTTATGATGCAGACGATTTACTAGATGATTTTTCCATTGAAGATTTGAAAGGAAAAGTGAGGGTTAGAAACAAAAAAGTAAAAAAGGTACTATGTTTCTTCTCAAAACCAAACAAAATTGCCTATAGTCATACATTAGGCCATCGAATAAAAGCAATCCAGAAGAGGCTAGATGACATTGCTAAAATGAAGCATGCATTGCAACTAACTGACCGCCCTATGGAGAATCAGATTTTATATAGGGAGCAGAGACAAACTTACTCTTTTGTGAGTAAAAATGAAGTTATTGGAAGAGACGATGAAAAGAAACGTATTAAGCGTTATCTACTTGATATCAATGCTTCAGATAATGTTTCTGTAATTCCCATAGTTGGGATTGGGGGATTAGGTAAGACTGCTCTTACTCAACTGGTCTACAATGATAACGATGTTCATAAGCATTTTGAGCTAAAAATGTGGGTGTATGTTTCTGATGAATTTGATATGAAGAAAATAGCTCAGGAGATCATCCGGGATGAAAAGAATAGTCCGATGGAGCAAGTGCAAGAACAACTTAGAGACAAAATTCGAGGGAAGAAGTTTTTGCTTGTGTTAGATGACATGTGGAACGAGGATCGTGAACTGTGGCTTAAATTGAAGAGCTTGTTCGTGGAAGGAGGAAAAGGAAGCATGATAATTGTGACAACGCGTAGTCAAACTGTGGCGAAAATAGCAGGCACACATCCACCTCTTTTCTTAGAGGGTTTGGATTCGCAAAAATCACAGGAGTTATTCTCTCGAGTGGCTTTCGGCGAGTTAAAAGAACAAAATGATTTGGAATTGGTAGCTATAGGAAGGGACATTGTTAAAAAATGTGCTGGCATCCCTCTTGCTATCAGGACTATTGGAAGCCTTTTGTTTTCTCGAAATTTGGGAAGAAGCGATTGGCTATATTTCAAGGATGTTGAGTTTTCGAAGATAGATCAAAACAATGACAAAATCTTTGCAATGCTTAAACTGAGTTACGATCATCTTCCTGCATTTCTAAAAAAATGTTTTGCATATTGTTCACTGTTTCCGAAAGGCTTTGTGTTTGAAAAAAATACTCTCATTCAGTTATGGGTAGCTGAGGGGTTCATTCAACAATCAAATGATGTTAGATGTGTAGAAGATGTTGGTCATGAGCACTTCATGAGTTTGCTGTCAATGTCCTTCTTTCAAAATATCACTATAGACGATTGTGGCGGCGTAAGTACTTGTAAAATGCATGACCTTATGCATGATCTAGCACAGCTAATAGCTGGGAGTGAATATGCAGTGGTTGAAGGAGAAGAAGCAAACATTGTAAACCGAACGCGTTATTTGTCGTCTCGTACTGCATTACAGTTCGGACCACCGTCACCATGTTCCTACAAATTAAGGACATTGCATTTACATCCACAAATGAATAATTCAAGCAATTATTTGCGCTTTTCCTTTTCAGGCCTAAAGTTCTTACGTGTGTTGACACTTTGTGGGTTGAAAATTTCCGCAATCTCAAATAGTATTGAAGAGATGAAGCATTTAAGATACATTGATCTATCACAGAATGTTGCACTTAAAGAACTTCCGCCGGGCATTACCATCCTGCAGAACTTGCAAACTCTAAAACTTTCTGAATGTTCAAAGCTCGAAATATTACCAGAAAATCTCAATAAAAGTCTCCGGCATCTTGAGTTGAATGGTTGTGTGAAATTGAAATGTATGCCACAAGGGATAGCACAGTTGACAAATCTTCAAACACTAACACTTTTTGTAGTGAGAAATAAAAGTGTAAATGAATTGGGTGGTTTAATCAACCTCAGAGGGAGATTAGAAATAAAAGGGTTGGATTTCCTACGAAATAATGTAGCAGATATTGAAAAAGTACTTCTTGAAAAGCAACACCTTCAAGAATTGGAATTGCGGTGGGCCTACGACGATGGTTTTGATGAGAATTTTCAAACATGCCCAGTATTGCCCGACAGGGCCGAACAAGAAAACGAAAACTGGGTGGAAGATGAGATGATTTTACAAGCTCTGCAATCACACCACTCGCTTCAGAAACTAATTATAGATGGATTTTGCGGCAAAAGATTACCAGATTGGATAGGGAATCTCCCATCGCTCTTGACTCTTGAGATCTACAATTGCCCTGGTTTGACATCACTGCCCGAATCAATTTGTAGACAGGTATCTTTGCAGAAACTTTCCATTTGTAATTGCTTCTCATTAGAGAAAAGATACGGAAGAGCATTTGGTATAGACTGGCCCAAAATCTCTCACATCCGAAAAGTTGAGATCCTTCCTATGAAACCATTGTTTTTTAAGTACTTTTCTTGA 2721 0.3782 MLLNFSLLQYNSSFCFFIPLFKPDTSNTTVDCFIKPIQLIAVHVHQIQLLILFLDSDFETRMEALAVTVLEKLGSSLYKELGIIWNLKEDIEKMKNTVSMIKSVLLDAETKANNHQVSNWLEELKDVLYDADDLLDDFSIEDLKGKVRVRNKKVKKVLCFFSKPNKIAYSHTLGHRIKAIQKRLDDIAKMKHALQLTDRPMENQILYREQRQTYSFVSKNEVIGRDDEKKRIKRYLLDINASDNVSVIPIVGIGGLGKTALTQLVYNDNDVHKHFELKMWVYVSDEFDMKKIAQEIIRDEKNSPMEQVQEQLRDKIRGKKFLLVLDDMWNEDRELWLKLKSLFVEGGKGSMIIVTTRSQTVAKIAGTHPPLFLEGLDSQKSQELFSRVAFGELKEQNDLELVAIGRDIVKKCAGIPLAIRTIGSLLFSRNLGRSDWLYFKDVEFSKIDQNNDKIFAMLKLSYDHLPAFLKKCFAYCSLFPKGFVFEKNTLIQLWVAEGFIQQSNDVRCVEDVGHEHFMSLLSMSFFQNITIDDCGGVSTCKMHDLMHDLAQLIAGSEYAVVEGEEANIVNRTRYLSSRTALQFGPPSPCSYKLRTLHLHPQMNNSSNYLRFSFSGLKFLRVLTLCGLKISAISNSIEEMKHLRYIDLSQNVALKELPPGITILQNLQTLKLSECSKLEILPENLNKSLRHLELNGCVKLKCMPQGIAQLTNLQTLTLFVVRNKSVNELGGLINLRGRLEIKGLDFLRNNVADIEKVLLEKQHLQELELRWAYDDGFDENFQTCPVLPDRAEQENENWVEDEMILQALQSHHSLQKLIIDGFCGKRLPDWIGNLPSLLTLEIYNCPGLTSLPESICRQVSLQKLSICNCFSLEKRYGRAFGIDWPKISHIRKVEILPMKPLFFKYFS 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07204 906 Pfam Rx N-terminal domain 68 152 IPR041118 -
Vivi3g07204 906 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 476 IPR027417 -
Vivi3g07204 906 FunFam Probable disease resistance protein At1g61300 206 370 - -
Vivi3g07204 906 Gene3D - 462 552 IPR036388 -
Vivi3g07204 906 SUPERFAMILY L domain-like 541 870 - -
Vivi3g07204 906 Gene3D - 67 195 - -
Vivi3g07204 906 Pfam NB-ARC domain 226 463 IPR002182 GO:0043531
Vivi3g07204 906 Gene3D - 204 368 IPR027417 -
Vivi3g07204 906 Gene3D - 375 461 IPR042197 -
Vivi3g07204 906 PRINTS Disease resistance protein signature 247 262 - -
Vivi3g07204 906 PRINTS Disease resistance protein signature 661 677 - -
Vivi3g07204 906 PRINTS Disease resistance protein signature 412 426 - -
Vivi3g07204 906 PRINTS Disease resistance protein signature 315 329 - -
Vivi3g07204 906 Gene3D Ribonuclease Inhibitor 589 894 IPR032675 -
Vivi3g07204 906 PANTHER DISEASE RESISTANCE PROTEIN RP 93 865 IPR044974 GO:0006952
Vivi3g07204 906 FunFam Probable disease resistance protein At1g63360 462 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07204 Vivi-Chr3 200255620 200259886 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07204 244 717 WRKY Transcription Factor Family AT5G45050 22.414 7.70e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07204 - - mtr:11424880 1073.54