Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07203 ATGGAAGCCCTTGCTATTACTGTCTTGGAAAAGTTGGGTTCTTCACTTTACAAAGAGCTTGGAATCATTTGGAATCTCAAAGAGGATATCGAAAAAATGAAAAACACGGTATCTATGATAAAATCAGTACTCCTCGATGCAGAGAGCAAGGCCAATAATCATCAAGTTAGTAATTGGTTGGAGGAGCTGAAAGATGTACTTTATGATGCAGATGATTTACTCGACGATTTTTCTAGTGAAGATTTGAAAGGAAAAGTGATTGCTAGACCTAGAAGCAAAAAACTAAAACAGGTACTATATTTCTTCTCAAAACCAAACAAAATTGCCTATAGTCATACATTAGGCCATCGAATAAAAGAAATCCAGAAGAGGCTTGATGAAATTGCTAAAATTAAGCATGCATTGCAACTAACTGACCGCCCTATGGAGAATCGGATTGTATATAGAGAACAAAGACAAACTTACTCTTTTGTGAGTAAAAATGAAGTTATTGGAAGAGACGATGAAAAGAAACGTATTAAGCGTTATCTACTAGATATCAATGCTTCAGATAATGTTTCTGTAATTCCCATAGTTGGGATCGGGGGATTAGGTAAGACCGCACTTGCTCAACTGGTCTACAATGATAATGATGTTCATAAGCATTTTGAGCTAAAAATGTGGGTGTATGTTTCTGATGAATTTGATATGAAGAAAATAGCTCAGGAGATTATCCGGGATGAAAAGAATAGTCCGATGGAGCAAGTGCAAGAACAACTTAGAGACAAAATTCGAGGGAAGAAGTTTTTGCTTGTGTTAGATGACATGTGGAACGAGGATCGGGAACTGTGGCATAAATTGAAGAGCTTGTTCGTGGAAGGAGGAAAAGGAAGCATGATAATTGTGACAACGCGTAGTCAGACTGTGGCGAAAATAGCAGGCACACATCCGCCTCTTTTCTTAGAGGGTTTGAATTCACAGAAATCTATGGAGCTGTTCTCTCGAGTGGCATTCGGCGAGTTAAAAGAACAACATGACATGGAATTGGTAGCTATAGGAAGGGACATTGTTAAGAAATGTGCTGGCATCCCTCTTGCTCTAAGGACTATTGGAAGCCTTTTGTTTTCTCGAAATTTGGGAAGAAGCGATTGGCTATATTTCAAGGATGTTGAGTTTTCGAAGATAGATCAACACAATGACAAAATATTTTCAATCCTTAAACTGAGTTACGATCATCTTCCCGCATTTCTAAAAAAAAGTTTTGCATATTGTTCACTGTTTCCTAAAGGCTATGTGTTTGAGAAAAAGTCTCTCATTCAGTTATGGGTAGCTGAGGGGTTCATTCAACAATCAAATGATGTAAGATGTGTAGAAGATGTTGGTCATGAGTACTTCATGAGTTTGCTGTCAATGTCCTTCTTTCAAGATGTCATTATAGACGATTGTGGCGGCGTAAGTACTTGTAAAATGCATGACCTTATGCATGATCTAGCACATCTAATAGCCGGGAGTGAATATGCAGTGGCTGAAGGAGAAGAAGCAAACATTGTAAACAGAACGCGTTATTTGTCGTCTCGTTCTGCGTTACAGTTCGTACCACCGTCACCATCTTCCTATAAGTTAAGGACATTTCATTTACTTCCACAAGTGAATTCAAGCAATCATTTGCGCCAGACATGTGTTCTTTCCTTTTCAGGCCTAAAGTTCTTACGTGTGTTGACACTTTGTGGGTTAAAAATTGCCGCAATCCCAAATAGTATTGAAGAGACGAAGCATTTAAGATATATTGATCTATCACAGAACAATCTTCTTAAAAATCTTCCGCCGGGCATTACCAACCTGCAGAACTTGCAAACTCTAAAACTTTCTGAATGTTCAAAGCTCGAAATATTACCAGAAAATCTCAATAAAAGTCTCCGGCATCTTGAGTTGAATGGTTGTGTGAAATTGATATGTATGCCACAAGGGATAGGACAGTTGACAAATCTTCAAACACTAACACTTTTTGTAGTGAGAAATAAAAGTGTAAATGAATTGGGTGGCTTAATCAACCTTAGAGGGAGATTAGAAATAAAAGGGTTGGATTTCCTGCGAAATAGTGTTGAAAATATTGAAAAAGTACTTCTTGAAAAGCAACACCTTCAAGAATTGGAATTGCGGTGGGCCTACGACGATGGTTTTGATGAGAATTTTCTAACATGCCCTGAATTGCCCGACAGGGCCGAACAAGCAAACGAAAACTGGGTGGAAGATGAGATGATTTTACAAGGTCTGCAACCACACCACTCGCTTCAGAAACTAGTTATAGATGGATTTTGCGGCAAAAGATTACCAGATTGGATAGGGAATCTCCCATCGCTCTTGACTCTTGAGATCTACAATTGCACCGGTTTGACATCACTGCCCGAATCAATTTGTAGACAGGTATCTTTGCAGAAACTTTCCATTTGTAACTGCTTCTCATTAGAGAAAAGATATGGAAGAGCATTTGGTATAGACTGGCCCAAAATCTCTCGTATCCGAAAAGTTGAGATCCTTCCTATGAAACCATCGTTTTTCAAGTACTTTTCTTGA 2553 0.3854 MEALAITVLEKLGSSLYKELGIIWNLKEDIEKMKNTVSMIKSVLLDAESKANNHQVSNWLEELKDVLYDADDLLDDFSSEDLKGKVIARPRSKKLKQVLYFFSKPNKIAYSHTLGHRIKEIQKRLDEIAKIKHALQLTDRPMENRIVYREQRQTYSFVSKNEVIGRDDEKKRIKRYLLDINASDNVSVIPIVGIGGLGKTALAQLVYNDNDVHKHFELKMWVYVSDEFDMKKIAQEIIRDEKNSPMEQVQEQLRDKIRGKKFLLVLDDMWNEDRELWHKLKSLFVEGGKGSMIIVTTRSQTVAKIAGTHPPLFLEGLNSQKSMELFSRVAFGELKEQHDMELVAIGRDIVKKCAGIPLALRTIGSLLFSRNLGRSDWLYFKDVEFSKIDQHNDKIFSILKLSYDHLPAFLKKSFAYCSLFPKGYVFEKKSLIQLWVAEGFIQQSNDVRCVEDVGHEYFMSLLSMSFFQDVIIDDCGGVSTCKMHDLMHDLAHLIAGSEYAVAEGEEANIVNRTRYLSSRSALQFVPPSPSSYKLRTFHLLPQVNSSNHLRQTCVLSFSGLKFLRVLTLCGLKIAAIPNSIEETKHLRYIDLSQNNLLKNLPPGITNLQNLQTLKLSECSKLEILPENLNKSLRHLELNGCVKLICMPQGIGQLTNLQTLTLFVVRNKSVNELGGLINLRGRLEIKGLDFLRNSVENIEKVLLEKQHLQELELRWAYDDGFDENFLTCPELPDRAEQANENWVEDEMILQGLQPHHSLQKLVIDGFCGKRLPDWIGNLPSLLTLEIYNCTGLTSLPESICRQVSLQKLSICNCFSLEKRYGRAFGIDWPKISRIRKVEILPMKPSFFKYFS 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07203 850 Pfam Rx N-terminal domain 8 93 IPR041118 -
Vivi3g07203 850 SUPERFAMILY L domain-like 482 815 - -
Vivi3g07203 850 PANTHER DISEASE RESISTANCE PROTEIN RP 35 809 IPR044974 GO:0006952
Vivi3g07203 850 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 417 IPR027417 -
Vivi3g07203 850 Gene3D Ribonuclease Inhibitor 531 836 IPR032675 -
Vivi3g07203 850 Gene3D - 403 493 IPR036388 -
Vivi3g07203 850 Gene3D - 144 309 IPR027417 -
Vivi3g07203 850 FunFam Probable disease resistance protein At1g61300 147 311 - -
Vivi3g07203 850 FunFam Probable disease resistance protein At1g63360 403 493 - -
Vivi3g07203 850 Gene3D - 6 136 - -
Vivi3g07203 850 Gene3D - 316 402 IPR042197 -
Vivi3g07203 850 PRINTS Disease resistance protein signature 256 270 - -
Vivi3g07203 850 PRINTS Disease resistance protein signature 353 367 - -
Vivi3g07203 850 PRINTS Disease resistance protein signature 188 203 - -
Vivi3g07203 850 PRINTS Disease resistance protein signature 605 621 - -
Vivi3g07203 850 Pfam NB-ARC domain 167 404 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07203 Vivi-Chr3 200250243 200255263 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07203 185 846 WRKY Transcription Factor Family AT5G45050 22.663 1.35e-12 70.1