Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07178 ATGGCGACTATTTTTGGAGGAGCGCTTCTTACAGCTTCCATGGAGATGTTGGTGAAAAAGGTTGTTTCTGGTGAATTTTTTGATTTGTTTCGAAGGACTAAGCTTGACGTTGAGCTGTTGGAAAAGCTGGAGATAACACTGCTGAGTCTTCAATCTGTACTTTATGATGCTGAAGACAGACAGATCGCTAATCCTGCTGTCAAGAAGTGGCTGGAGATGTTGCAAGATGCTGTCTTTCAAGCTGACCAACTTTTCGACGAGCTCAACACCGAAGCTTTAAGGTGCCAAGTTGAAGCTGATCAGGTTCTTAAAAAATTTTTAGATTATTTTAAAAGGTTTAATAAAAAGATCAATTCTAAATTGCAAAAACTATTTGGAAGATTAGAACATTTGAGAAACCAAAATCTTGGATTGAAAGAAGGTGTTTCCAGTTGTGTTAGGAATATAACTCCTACAAGCCCTTTTTTAGGAGATGAATCTGATATTAAAGGCAGAGATGATGACAAAAAGAAACTTAAAGAGTTTCTGCTGTCAGAGGGTGGCAATGATGGTGGAAGTAAAATAGGAGTGATTTCCATTGTGGGTATGGGAGGGTTAGGAAAAACAACCCTAGCTAAACTCCTTTACCATGACCGTGTTGTGAAGGAGAAGTTTGATGTCAGAGGGTGGGCACATATTCCAAAAGATTTTGATGTTATCACTATCACTAAAACCATTCTTAAATCTGTCACTTCAGGAACAATTACAGAAACTGACTTAGTTAAACTCGAAGATCAGTTGCAGCAAAGTTTAAGTAACAAAAAGTTTTTGTTAGTACTTGATGATATATGGTATGGAAACTATATTGGTTGGAATAGTCTAAGTGATATCTTTAATGTTGGACAAATAGGAAGTAAGATCATCATCACAACTCGAGATGTAAGAGTCGCACTACCCAAGCAAAAATCTCTCCATGTCCACCATTTAAGATCTTTGGAAACTGAAGATTCATGGTCTTTACTAGCCAGACATGCATTTGTAGAAACAAACTACCAACAACATCCCAGTTTAGAAATAACTGGTAGAGAAATTGCCAAAAAATGTGGCGGTTTACCATTAGCTGCAATAGCACTTGGGGGTATTCTCCGGTTCATGTCACCGGATCGTTGGAGTGATGTGTTAAAAAGTAGTATTTGGGAACATACAAGTGAAGTTGTGGAACCATCTCTGCTACTGAGCTATCATTACCTTCCAGCTTCTCTAAAAGGATGCTTTGCTTATTGTGCAATTTTTCCAAAGAACTCAGTCTTAGTGAAAAAGACGATGGTTCAGTTGTGGATTGCAGAAGGCTTAATACCTCAGCCAAAAAATGAGAATAGTTGGGAAAAAGTAGCTGAAGAATTCTTTGACGAGTTAGTGTCTAGGTCTCTGATACGTCAACGGTTCCTTGCTCATGAGCAAAACAACTTTGAAATGCATGATCTAATCAATGATTTAGCTATGGCAGTTTCATTTCCGTATTGCATTAGGTTGGACGAACATAAGCCAGATGAAAGGGTGCGACACTTGTCATACGACACAATAGAATATAACTCATACAGTAAAATTGAAAAATTGCATGGACTAAATGGTCTACGAACCGTTTTACCGTTGAACTTCCAAGCCTCATGGGATTATGACAATTTTGGGTCGTGGAAGTTATTTTTTGACTTGTTGTCAAAAATGACACACTTACACGTGTTGTCACTTTCACCCTACAGAAATATCACTGAGTTGCCCAACTCAATTGGAAATTTGACGTATCTGCGATACTTAAATCTCTCTGAAACTTGGATTAAAACGTTGCCTTTAGAAACATGCAAGCTTTACAATTTGCAGACTTTGTTGTTGTCATATTGCTGTAGACTCGAAGAATTGCCAAAAGACATGGGGAAATTGGTAAAACTTCGCCACCTTGACATCATAGGCACTAATTTGAAAAAAATGCCTGCACAACTATCCAAATTAGAAAATCTACAAACATTGTCAGATTTTATTGTGAGCAGCGTTAAGGATGTAGGATTAAAGATTGAAGATCTTGGAAAATTTCCCCATCTACGAGGAAGCCTTTCCATCTCACATCTTGAAAATGTAACTGACTCATCTCAAGCTTCTCAAGCAAACTTGGAGATGAAAAACGAAATTGACGAGTTGGAACTAGGATGGTCTTACACTGCTCCTTCAAACTCAGAAATACAAGTACTCGAACGGCTGCGTCCGTCGACAAATTTGAAGAGTTTGTCCATCTCTAGATTTGGTGGAGATAAATTATCAAATTGGGTGGGAGATCCTTTATTTATAAACATGGTGTGTTTGATGATCACAGGGTGTAAAAACATTTCAGTGCTTCCATCCCTAGGGCAACTCGGTAATCTAAAACAACTTTATTTTAGTGAGATGGAATCTGTAAAGAGTGTTGGTATCGAGTTTTATGGAAGTGGTTCTTCTTCATTTCAACCATTTACCTCTTTAGAGATTCTAAGCTTTGAAAAGATGCCAGAGTGGGAGGAATGGGAGTTGATTGGAGGTACATCTATAGAGTTTCCTAGTCTTATAAACTTGTCTCTAAATTACTGTCCAAAACTGAAAGAAAACATACCTGGCAACCTTCCTAAGCTCGAAAGATTGTCACTTCAAAATTGTCCAGAACTTGAAGGGATGACACCCGACAATCTTCCTTCTCTTGCCGTTCTTAGATTAAAGGTGTGTCCCTTATTGATGGGGTCAATACATTCTATTACAAACCCACCATGTGACGTATTCAGCCAATTGGTGATTTGTCTCAATTCTCTTCAAGAGCTGAAGTTATACAGTATTCCATCTCTAACATCATTTCCGATAGATGGTCTTCCCAAAACCTTACAAACTCTCTCTATTGATTATTGTGAGAATCTGGAGTTCTTTTCTCATGCATCTTTTCACAATTACTCATCACTCGAGGATTTGCAAATACGCAATAGTTGTAATACAATGACATCATTTACCTTGGGCTCTCTCCCTGTCCTCAAAAGTCTATATATTTCCGATTGTAAACATTTAAAATCCATATCAATAGCAGAAGATGCATCAGAACCAAATCTAGTGTTTCTCAGAACCATCTATGTAGGGGATTGCAATGAACTGGAGTCAGTTTCTCTAAATGGATTACCCATTCCTAAACTCACTGATTTACATTTATGGGACTGTAAGAAGTTACGTTCTCTACGTGAATCAATAAATACTTTAACTAGCCTTCAACATATGGGAATTAATGACCTTCCAAATCTGCAATCGTTTTCCATAGATGATTTGCCTATCAATTTGCGGCGGCTGTCGGTCGGCAATGTTGGAGGGATTTTGTGGAATAAAACTTGGGAACATCACACTTCTCTTTCAGAGTTATATCTTAAGGGTGGTGATATTGTGAAGGAGCTGATGAAAAGGCAAGCTCCGTTTCTACCCACTAATCTCGTTTCCTTACATATCTATGGTCTTGAAATAGAATGCTTAGATGGGAAGTGGCTTCAACATCTCACCTCTCTCCATAAACTTTGTATTTTTACTTCACCCAAGCTCAAGTCATTGCCTGAAAAGGGGGAATTGCCTTCCTCTCTTAAACAACTGTATATCAGTTTGTGTCCGTTGTTGAAAGCAAATTTGCAGAGGAAGGAAGGGAAAGAGTGGCGTAAGATTTCTCACATTCCCTTCATTTCTATAAACACCGAAATCATCAAATGA 3735 0.3813 MATIFGGALLTASMEMLVKKVVSGEFFDLFRRTKLDVELLEKLEITLLSLQSVLYDAEDRQIANPAVKKWLEMLQDAVFQADQLFDELNTEALRCQVEADQVLKKFLDYFKRFNKKINSKLQKLFGRLEHLRNQNLGLKEGVSSCVRNITPTSPFLGDESDIKGRDDDKKKLKEFLLSEGGNDGGSKIGVISIVGMGGLGKTTLAKLLYHDRVVKEKFDVRGWAHIPKDFDVITITKTILKSVTSGTITETDLVKLEDQLQQSLSNKKFLLVLDDIWYGNYIGWNSLSDIFNVGQIGSKIIITTRDVRVALPKQKSLHVHHLRSLETEDSWSLLARHAFVETNYQQHPSLEITGREIAKKCGGLPLAAIALGGILRFMSPDRWSDVLKSSIWEHTSEVVEPSLLLSYHYLPASLKGCFAYCAIFPKNSVLVKKTMVQLWIAEGLIPQPKNENSWEKVAEEFFDELVSRSLIRQRFLAHEQNNFEMHDLINDLAMAVSFPYCIRLDEHKPDERVRHLSYDTIEYNSYSKIEKLHGLNGLRTVLPLNFQASWDYDNFGSWKLFFDLLSKMTHLHVLSLSPYRNITELPNSIGNLTYLRYLNLSETWIKTLPLETCKLYNLQTLLLSYCCRLEELPKDMGKLVKLRHLDIIGTNLKKMPAQLSKLENLQTLSDFIVSSVKDVGLKIEDLGKFPHLRGSLSISHLENVTDSSQASQANLEMKNEIDELELGWSYTAPSNSEIQVLERLRPSTNLKSLSISRFGGDKLSNWVGDPLFINMVCLMITGCKNISVLPSLGQLGNLKQLYFSEMESVKSVGIEFYGSGSSSFQPFTSLEILSFEKMPEWEEWELIGGTSIEFPSLINLSLNYCPKLKENIPGNLPKLERLSLQNCPELEGMTPDNLPSLAVLRLKVCPLLMGSIHSITNPPCDVFSQLVICLNSLQELKLYSIPSLTSFPIDGLPKTLQTLSIDYCENLEFFSHASFHNYSSLEDLQIRNSCNTMTSFTLGSLPVLKSLYISDCKHLKSISIAEDASEPNLVFLRTIYVGDCNELESVSLNGLPIPKLTDLHLWDCKKLRSLRESINTLTSLQHMGINDLPNLQSFSIDDLPINLRRLSVGNVGGILWNKTWEHHTSLSELYLKGGDIVKELMKRQAPFLPTNLVSLHIYGLEIECLDGKWLQHLTSLHKLCIFTSPKLKSLPEKGELPSSLKQLYISLCPLLKANLQRKEGKEWRKISHIPFISINTEIIK 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07178 1244 PRINTS Disease resistance protein signature 263 277 - -
Vivi3g07178 1244 PRINTS Disease resistance protein signature 361 375 - -
Vivi3g07178 1244 PRINTS Disease resistance protein signature 190 205 - -
Vivi3g07178 1244 PRINTS Disease resistance protein signature 874 890 - -
Vivi3g07178 1244 Gene3D Ribonuclease Inhibitor 929 1112 IPR032675 -
Vivi3g07178 1244 Pfam NB-ARC domain 167 407 IPR002182 GO:0043531
Vivi3g07178 1244 SUPERFAMILY L domain-like 485 913 - -
Vivi3g07178 1244 Gene3D - 14 128 - -
Vivi3g07178 1244 Pfam Rx N-terminal domain 12 102 IPR041118 -
Vivi3g07178 1244 Gene3D - 324 406 IPR042197 -
Vivi3g07178 1244 Gene3D Ribonuclease Inhibitor 1118 1221 IPR032675 -
Vivi3g07178 1244 SUPERFAMILY L domain-like 928 1230 - -
Vivi3g07178 1244 Gene3D Ribonuclease Inhibitor 556 928 IPR032675 -
Vivi3g07178 1244 Gene3D - 153 317 IPR027417 -
Vivi3g07178 1244 FunFam Probable disease resistance protein At1g63360 407 495 - -
Vivi3g07178 1244 PANTHER DISEASE RESISTANCE PROTEIN RP 40 1010 IPR044974 GO:0006952
Vivi3g07178 1244 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 421 IPR027417 -
Vivi3g07178 1244 Coils Coil 114 134 - -
Vivi3g07178 1244 Gene3D - 407 495 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07178 Vivi-Chr3 200007996 200019054 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07178 582 668 WRKY Transcription Factor Family AT4G12020 39.773 6.41e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07178 - - vvo:131593262 1932.53