Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07163 ATGCATGACCTCATCAATGACTTAGCTATGAAAATTTCATCTCCATACTGTACTAGGTTAGACAATCATAAAATAGATGAAATGATAGATAAAAGGGTGCGGCACTTGTCATTCGATAGACTAAAATATAACTCATACAATAAAATTGAAAATTTGCATGGATTAAAAGGTCTACGAACCTTTCTACCCATGCCAGTGCAAATTTCATGGAATTATGGTAATTCTACGTCGTTGAAGTTATTTTCTGGCTTGTTGTCGACAATGACACAATTACACGTGTTATCACTTTCACACTTCAAAAATATCACTGAATTACCCAACTTTATTGGAAATTTGATATATCTGCGATACTTGAATCTCTCTAGCACTCAGATTAAATCTTTGCCTTCCGAAACATGCAAGCTTTACAATTTGCAGACTTTGTTGTTGTCAAGTTGCAAAGAACTCACTGAATTGCCAAAGGACATGGGGAAATTGGTGAAACTGCGCCACCTTGACATCAGAGGCACTAAATTGAAGAAAATGCCGGCACAAATTTCCAAATTGAAAAATCTACAGACATTGTCCGACTTTGTTATAAGCAATGTTAAGGACGTTGGATTGAAGATTGAAGATCTTGGAAAATATCCCCATCTACGGGGAAGACTTTCCATCTCACAACTTGAAAATGTAATTGACCCATCTCATGCTTCTCAAGCAAATTTGGAGATGAAAAAAGAAATTGACGAGTTGGAACTAAGATGGTCATGCATTAATCCTTCAAACTCACAAATACAAAATGTTGTATTGGAACGTCTACGCCCATCGACACATTTGAAGAGTTTGACCATTTCCGGATATTGTGGAGAAAAATTACCAGATTGGTTGGGCAATCCATTATTTAGCAACATAGTGTGTATAAAAATCTCGGGATGTAAAAATTGTTCAAGGCTCCCATCCCTGGGGCAACTCGATAATCTTAAAGAACTCTTTATTAGTGGGATGCAATCAATAAAGAGTGTTCGTACCGAGTTTTATAGAAGAGACTCTCCTTCATTTCAACCATTCACCTCTTTAAAGACTCTAAGCTTTGAAAATATGCTAGAGTGGAAGGAATGGGAGTTGATTGGAGGTACATATATAGAGTTTCCTAGTCTTATACACTTGTCATTAGTAGATTGCCCAAAACTCAAGGAAAACATACCGACCAACCTTCCTAAGCTGACACATTTATGGGTGAAACATTGTCCCGAACTCATAGTGATTACACCGTACAACCTTCCTTCCCTTATTGAACTTGAGTTACATGATTGTTCTCTACTGATAAAGTCAAGGAGTTCAGATGATACAGGCCCACCATTTGACATGTTCAGCCAATTGATGATTAGCCTGAATTCCCTTCAAAAGATAACCTTAGAAAATATTCCATCTCTAACATCCTTTCCGAGAGACGGTCTTCCCAAAACCTTACAATCTATCATAATTGATAGATGTGAGAATCTGGAATTCCTTTCTCATAAATCTTTTCACAATTACAAATCACTCGAGCGTTTGGAAATAAGTAAAAGTTGCAATTCAACGACATCATTTACCTTGTGCTCTTTCCCGGTCCTCAAAATTCTCGTGATTTATGGCTGCAAACATTTAAAATCCATATTAATTGCAGAAGATGCATCAAAACAGAATCTCTTGTTTCTTAGAACCATCAGAATAAGTAGTTGCGATGAATTGGAGTCAGTTTCCCTAAGTGGATTGCCTATTCCTAACCTCGCTGATTTAACTGTGTGGGGCTGTAAGAAGTTCCGTTCTCTACCTGAATCATTAAAGACTTTCACTAGCCTTCAAGAAATGAATATTGTTAACCTTCCAAATCTGCAATCGTTTTCCATAGATGATTTGCCTAACAATTTACGGGACTTGTTGATTGGCGGAGTTGGAGGGATTTGGTGGAATACAACTTGGCAACATCTCACTTCTCTTTCAACGCTGGATATTCGAAGTCATGATATTGTGAAGGGGCTGATGAAAACTCAAGTTCCGTTTCTACCCACTAATCTCATTTCCTTGAATATCGGCGACCTTAAAGATATAGAATGCTTGGATGGGAAGTGGCTTCAACATCTCACCTCTCTCCAACAACTTCTCATTTATGACTCACCCAAGCTCAAGTCGTTGCCGGAAAAAGGGGAATTGCCTTCCTCTCTTAAATTACTGATTATCACAGGGTGTCCATTATTGGAAGCAAAATTGCGGAGGAAGCAAGGGAAAGAATGGAGGAAGATTTCTCACATTCCCACAATATATTTAAATCACGATATCATTGAATGA 2307 0.378 MHDLINDLAMKISSPYCTRLDNHKIDEMIDKRVRHLSFDRLKYNSYNKIENLHGLKGLRTFLPMPVQISWNYGNSTSLKLFSGLLSTMTQLHVLSLSHFKNITELPNFIGNLIYLRYLNLSSTQIKSLPSETCKLYNLQTLLLSSCKELTELPKDMGKLVKLRHLDIRGTKLKKMPAQISKLKNLQTLSDFVISNVKDVGLKIEDLGKYPHLRGRLSISQLENVIDPSHASQANLEMKKEIDELELRWSCINPSNSQIQNVVLERLRPSTHLKSLTISGYCGEKLPDWLGNPLFSNIVCIKISGCKNCSRLPSLGQLDNLKELFISGMQSIKSVRTEFYRRDSPSFQPFTSLKTLSFENMLEWKEWELIGGTYIEFPSLIHLSLVDCPKLKENIPTNLPKLTHLWVKHCPELIVITPYNLPSLIELELHDCSLLIKSRSSDDTGPPFDMFSQLMISLNSLQKITLENIPSLTSFPRDGLPKTLQSIIIDRCENLEFLSHKSFHNYKSLERLEISKSCNSTTSFTLCSFPVLKILVIYGCKHLKSILIAEDASKQNLLFLRTIRISSCDELESVSLSGLPIPNLADLTVWGCKKFRSLPESLKTFTSLQEMNIVNLPNLQSFSIDDLPNNLRDLLIGGVGGIWWNTTWQHLTSLSTLDIRSHDIVKGLMKTQVPFLPTNLISLNIGDLKDIECLDGKWLQHLTSLQQLLIYDSPKLKSLPEKGELPSSLKLLIITGCPLLEAKLRRKQGKEWRKISHIPTIYLNHDIIE 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07163 768 SUPERFAMILY L domain-like 452 740 - -
Vivi3g07163 768 Gene3D Ribonuclease Inhibitor 478 635 IPR032675 -
Vivi3g07163 768 Gene3D Ribonuclease Inhibitor 640 763 IPR032675 -
Vivi3g07163 768 Gene3D Ribonuclease Inhibitor 67 437 IPR032675 -
Vivi3g07163 768 SUPERFAMILY L domain-like 1 435 - -
Vivi3g07163 768 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 456 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07163 Vivi-Chr3 199481906 199486941 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07163 102 188 WRKY Transcription Factor Family AT4G12020 39.773 6.10e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07163 - - vvo:131593241 1068.14