Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07146 ATGGCTGCCATTGTTGGAGGAGCGCTTCTTTCAGCTTCCATGGAGATGCTGGTGAAAAAGGTCGTTTCTGGTGAGTTTCTTGTTTTGTTTCGGAGGACTAAGCTTGACGTTGAGCTGTTGGAAAAGCTGGAGATAACACTGCTGAGTCTTCAATCTGTACTTTATGATGCTGAAGACAAACAGATCGCTAACCCTGCTGTCAACAAGTGGCTGGAGAAATTGCAAGATGCTGTCTTTGAAGCTGACCAACTGTTCGACGAACTCAACACTGAAGCTTTAAGGTGCAAAGCTGAAGGTGGTCAGGTTCTTAAAAAGTTTTTAGATTATTTTCAAAGGTTTAATAAAAAGATCAATTCTAAACTGCACAAATTATTTGAAAGATTTGAACATTTGAGAAACCAAAATCTTGGATTGAAAGAAGGTGTTTCCAACTGTGTTTGGAATGTATCTCCTACAACTTCTGTTTTGGGAGATGAAACTGCTATTTATGGCAGAGATGATGACAAAAAGAAACTTAAAGAGTTTTTGCTGTTAGAGGGTGGCAATGATGGTGAAAGCATAGGAGTGATTTCTATTGTGGGTATGGGAGGATTAGGAAAAACAACACTAGCTAAACTCCTTTACAATGATCATCATGTGAAGGATAATTTTGAGGTTAGAGGGTGGGCACATGTCTCAAAAGATCTTGATGTTGTAGCTCTCACTAAAACCCTTCTTGAATCTGTCACTCCAAAAACAGATTCATCTAATGAGTTGAATAATCCCCAAGTACAATTGCAGCGAACTTTAAGTAACAACAAGTTTTTACTTGTATTGGATGATATATGGCTTGGAAGATATGTTGGTTGGAATAGTCTAATTGATATCTTTAATGTTGGCCAAAAAGGGAGTAAGATCATCATCACAACTCGTGATGAAAGGGTTGCCTTACCCAGGCTAAAATCTCTCTATGTCCACCATTTAAGATCTTTGGAAATTGAAGATTCCTGGTCTTTAATAGCGAGACATGCATTTGTAGAAAGAAACTACCAACAACATCCCAATCTAGAAATAATTGGTAGAGAAATTGCCAAAAAATGTGGAGGTTTACCATTAGCTGCAGTAGCATTGGGGGGTATTCTTCGAACCAAATTGTCACAAGAATATTGGAGTGATGTATTGAACAATAGTATTTGGGAACAAACACATGATGAAGTGCAGCCAGCTCTGTTATTGAGCTACCGTTATCTTCCAGCTTCTTTAAAAGGATGCTTTGCTCATTGTTCAGTTTTTCCAAAGAACTCAATCTTAGTGAAAAAGATGGTGGTTCAATTGTGGATTGGAGAAGGCTTAGTACCTCAACCAAAAAGTGAGAAAAGTTGGGAAAAAGTAGCTGAAGAATACTTTGATGAACTAGTGTCGAGGTCTCTGATACTTCAATGGTTTATTGGTGATGAGAAAGCATACTTTAAAATGCACGACCTCATCAATGATTTAGCTATGAGAGTATCATCTCCATATTGCACTAGGTTGGACAATCATAGGCCAGATGAAAGGGTAGATAAAAGAGTGAGACACTTGTCATTTGATAGGGAAGAATATAACTCATTCGATAAATTTGAAATATTGCATGGATTAAAAGGTCTACAAACCTTTCTTCCCATGCCATTACAAGCTGCATGGGATTATAATAGTTCTGTATCGTCGAAGTTATTTTCTGATTTGTTGTCGACAATGACACAATTACACGTGTTGTCTCTTTCAAGCTACAGAAATATCGTAGAGCTACCCAACTCTATTGGAAATTTAATTTACTTGCGATACTTGAATCTCTCTGGCACTCAAATTAGAAAGTTGCCTTCAGAAACATGCAAGCTTTACAATTTGCAGACATTGTTGTTGTCATATTGCAGTAAACTCATTGAATTGCCAAAAGACACGGGGAATTTGGTGAAACTACGACACCTTGACATCAGAGGCACTGATTTGAAGAAAATGCCGGCACAAATATCCAAATTAGAAAATCTACAAACATTGTCGGACTTTATTGTGAGCCGCGTTAAGGATGTTGGATTGAAGATTGAAGATCTTGGGAAATTTCCCCATCTACGAGGAAGCCTTTTCATCTCACAACTTGAAAATGTAATTGACTCATCCCATGCTTCTCAAGCAAACTTGGAGTTGAAGAAAGAAATTGACGAGTTGGAACTAGGATGGTCTTACAAGGCTCCTTCAAACTCACAAATACAAGTACTCGAACGGCTGCGTCCGTCGACAAATTTGAAGAGTTTGACCATCTTTGGATATGGTGGAGACCAATTATCAAATTGGGTGGGAGATCCTTTATTTGTAAACATGGTGTCTTTGAAGATCACAAGGTGTAAAAAAACTTCAGTGCTACCATCCCTCGGGCAACTAGGTAATCTAAAAGAAATCTTTTTTAGTGAGATGGAATCTGTAAAGAGTGTTGGTACCGTGTTCTATGGAAGTGGTTCTTCTTCATTTCAACCATTTACGTCTTTAGAGACTCTAAGCTTTGAAGATATGCCAGAGTGGGAGGAATGGAAGTTGATTGGAGGTACATCCATAGAGTTTCCTAGTCTTATACGTTTGTCTGTAAAGCGCTGTCCAAAACTGAGAGAAAACATACCTGGCAACCTTCCTAAGCTTGAAAGATTGTCACTTAAAAATTGTCCCGAACTTGAAGGGATGACACCCAACAATCTTCCTTCACTTGCCAACCTTAACTTAAGGGATTGTCCCTTATTGATGGGGTCAAGACATTCTATTACAAACCCACCATCTGACGTATTCAGCCAATTGGTGATTTGTCTCAATTCTCTTCAAAAGTTGACCTTATCCAGAATTCCATCTCTAACATCCTTTCCGAGAGACGGTCTTCCCAAAACCTTACGATCTCTCTCTATCCTTTCCTGTGAGAATCTGGATTTCTTTTCTCATGAATCTTTTCATAATTATTCATCACTGGAGGATTTGCAGATATTAGATAGTTGTAATTCAATGACATCATTTACCTTGGGCTCTCTCCCTGTCCTCAAAAGTCTATCTATTTTCGATTGTAAACATTTAAAATCCATATCAATAGCAGAAGATGCATCGGAAGCAAATCTAGTGTTTCTTGGAAGCATCTATGTAAGGGATTGCAGAGAACTGGAGTCAGTTTCCTTAAGTCGATTACCCATTCCTAAACTCACTTATTTAATTTTGTGGAGTTGTGAGAAGTTAATTTCTCTATCTGAATCAATAAAGAATCTAACTAGCCTTCAAGAAATGACAATTACTAAACTTCCAAATCTGCAATCGTTTTCCATAGATGATCTGCCTATCAGTCTGCGAGAGTTGCAGATTGGCTCTGTCGGAGGGATTTTGTGGAATACAACTTGGCAACATCTCACTTCTCTTTCAAAGCTGGATATTGAGGGTGATGATATTGTGAAGGGGGTGATGACAACGCAAGTTCCATTTCTACCCACTAATCTCGTTTCCTTAGGGATCTCTCGTCTCGATAAGAAAGAATGCTTGGATGGGAAGTGGCTTCGACATCTTACCTCTCTCCATACGCTTCACATTTCTGCTGCACCCAAGCTCAAGTCATTGCCAGAAAAGGGGGAACTGCCTTCCTCTCTTAAAGAACTGCATATCTTTTATTGTCAGTTGTTGAAAGCAAATTTGCAAAGGAAGAAAGGGAAAGAGTGGCGTAAGATTTCTCACATTCCCAAAATATATATAGACTACGAAATCATCAATTGA 3750 0.3856 MAAIVGGALLSASMEMLVKKVVSGEFLVLFRRTKLDVELLEKLEITLLSLQSVLYDAEDKQIANPAVNKWLEKLQDAVFEADQLFDELNTEALRCKAEGGQVLKKFLDYFQRFNKKINSKLHKLFERFEHLRNQNLGLKEGVSNCVWNVSPTTSVLGDETAIYGRDDDKKKLKEFLLLEGGNDGESIGVISIVGMGGLGKTTLAKLLYNDHHVKDNFEVRGWAHVSKDLDVVALTKTLLESVTPKTDSSNELNNPQVQLQRTLSNNKFLLVLDDIWLGRYVGWNSLIDIFNVGQKGSKIIITTRDERVALPRLKSLYVHHLRSLEIEDSWSLIARHAFVERNYQQHPNLEIIGREIAKKCGGLPLAAVALGGILRTKLSQEYWSDVLNNSIWEQTHDEVQPALLLSYRYLPASLKGCFAHCSVFPKNSILVKKMVVQLWIGEGLVPQPKSEKSWEKVAEEYFDELVSRSLILQWFIGDEKAYFKMHDLINDLAMRVSSPYCTRLDNHRPDERVDKRVRHLSFDREEYNSFDKFEILHGLKGLQTFLPMPLQAAWDYNSSVSSKLFSDLLSTMTQLHVLSLSSYRNIVELPNSIGNLIYLRYLNLSGTQIRKLPSETCKLYNLQTLLLSYCSKLIELPKDTGNLVKLRHLDIRGTDLKKMPAQISKLENLQTLSDFIVSRVKDVGLKIEDLGKFPHLRGSLFISQLENVIDSSHASQANLELKKEIDELELGWSYKAPSNSQIQVLERLRPSTNLKSLTIFGYGGDQLSNWVGDPLFVNMVSLKITRCKKTSVLPSLGQLGNLKEIFFSEMESVKSVGTVFYGSGSSSFQPFTSLETLSFEDMPEWEEWKLIGGTSIEFPSLIRLSVKRCPKLRENIPGNLPKLERLSLKNCPELEGMTPNNLPSLANLNLRDCPLLMGSRHSITNPPSDVFSQLVICLNSLQKLTLSRIPSLTSFPRDGLPKTLRSLSILSCENLDFFSHESFHNYSSLEDLQILDSCNSMTSFTLGSLPVLKSLSIFDCKHLKSISIAEDASEANLVFLGSIYVRDCRELESVSLSRLPIPKLTYLILWSCEKLISLSESIKNLTSLQEMTITKLPNLQSFSIDDLPISLRELQIGSVGGILWNTTWQHLTSLSKLDIEGDDIVKGVMTTQVPFLPTNLVSLGISRLDKKECLDGKWLRHLTSLHTLHISAAPKLKSLPEKGELPSSLKELHIFYCQLLKANLQRKKGKEWRKISHIPKIYIDYEIIN 1249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07146 1249 PRINTS Disease resistance protein signature 189 204 - -
Vivi3g07146 1249 PRINTS Disease resistance protein signature 360 374 - -
Vivi3g07146 1249 PRINTS Disease resistance protein signature 878 894 - -
Vivi3g07146 1249 PRINTS Disease resistance protein signature 262 276 - -
Vivi3g07146 1249 Gene3D Ribonuclease Inhibitor 554 928 IPR032675 -
Vivi3g07146 1249 PANTHER DISEASE RESISTANCE PROTEIN RP 40 850 IPR044974 GO:0006952
Vivi3g07146 1249 Gene3D - 406 495 IPR036388 -
Vivi3g07146 1249 Gene3D Ribonuclease Inhibitor 1114 1242 IPR032675 -
Vivi3g07146 1249 Pfam Rx N-terminal domain 10 102 IPR041118 -
Vivi3g07146 1249 SUPERFAMILY L domain-like 484 921 - -
Vivi3g07146 1249 Pfam NB-ARC domain 167 406 IPR002182 GO:0043531
Vivi3g07146 1249 Coils Coil 40 60 - -
Vivi3g07146 1249 Coils Coil 71 91 - -
Vivi3g07146 1249 Gene3D - 15 128 - -
Vivi3g07146 1249 Gene3D - 323 405 IPR042197 -
Vivi3g07146 1249 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 421 IPR027417 -
Vivi3g07146 1249 FunFam Probable disease resistance protein At1g61300 149 313 - -
Vivi3g07146 1249 Coils Coil 114 134 - -
Vivi3g07146 1249 FunFam Probable disease resistance protein At1g63360 407 495 - -
Vivi3g07146 1249 Gene3D - 148 312 IPR027417 -
Vivi3g07146 1249 SUPERFAMILY L domain-like 937 1233 - -
Vivi3g07146 1249 Gene3D Ribonuclease Inhibitor 938 1113 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07146 Vivi-Chr3 199415875 199431413 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07146 586 679 WRKY Transcription Factor Family AT4G12020 40.000 2.03e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07146 - - vvo:131593262 1857.8