Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07089 ATGAACAGCCTCTCAGAAAACTTGAATGTGTCAAAAATTCCAATAGTTGAAGATGTAGAGAAGAAATGTGTAAAAAATATTCAACATGAGGAACATAGGGTTGTTGATTATACTTATACACCACATTTAGATATGGAGTTTGAATCCGAGGCCGCGGCTTATGAATTTTATAATGAGTATAGTAGGGTAACTGGATTTGGTATTCGTCGAGAATATGGAAACAAAAGTAGAAAAGACGGAACTTTGACTTCGAGAAGATTCACGTGTTTTAAAGAGGGTATGCAGAATGTTGACAAACGGAGAAACTTGATAAAAGAGGGTAGAGAGGGTAGAGTAGAAACTAGAACGGGATGTGATGCTCGTATGGTTATTTCACTTGATCGAAAGATTGGGAAGTATAAGGTTGTTGATTTTGTGGGTCAGCATAATCATGCTCTTCTACCGCCGGGGTATGTTAATATGGTTCGCTCCCATCGACGCATATCTGAGTCACAGACGTCTCACATTTTAGTGGGTGAGAAGAAATCTAGATTGAAACAAAAAGTTTTTCGAAAAGAAGTTTCTAATGAAGTTGATGGAATGGATGGTATTGGTTGTACGAGACAAGAAAGTAAGAATTATCTTCCGACTAGAAGGATGCGGTCGCTAATGTATGGTGAGGTGGGTGCTTTGTTGATGCATTTTAAACGACAAAGTGAAAATCCTTCGTTCTTTTATGATTTTCAATTAGACGTTGAACAACAAATAACAAATGTATTCTGGGCGGATGCACAGATGATAAATGACTACGGATGCTTTGGTGATGTCGTCACTTTTGATACAACATACAAGATAAATAAGGATAATCGGCCATTGGGAGTATTTGTTGGAGTAAATAATCACAAGCAAATGGTTGTTTTTGGTGCAACGTTGCTATATGATGAAACGGTTCCTTCTTTTCAATGGTTATTTGAAACTTTTCTCCAAGCAATGGGTGGAGAAAAACCTAAAACCATTCTAACGGATCAAGATTCAGCAATGGCCACGGCTATTTCTTTAGTTATGCCTGAAACGTTTCATGGATTGTGCACTTGGCGTATAAGAGAAAATGCCATGAGGCATGTGGACCATCTGTATCAAAAGGGTTCACAAGTTTGCTCGGATTTTGAAGCTTGCATTGATCTACATGAAGAAGAAGGTGAGTTTTTGAACGCGTGGAATGTTTTACTTGCTGAACATAATGTTCTTAAAGATTCATGGCTTCATTCAATTTTTCAACTGAAGGAAAAATGGGCATGGGCGTACGTTAGAAAAAAATTCACAGCAGGTATGCGGTCTATTCAATTAAGTGAAAGTTTTAATTCTGAGTTGAAAAATCATCTGAAGTCAGATTTAAATTTAGTACAATTTTTCACACATTTTGAAAGAGTTGTCAATAAACAACGGAACATTGAGTCAGAAGCCGATTACAAGTCAAGACACGAGTTGCCTAAACTGAAAATGAAAAGGGCTCCTATGCTTGTACAAGCCGGAAATATTTACACTCCAACAATTTTTGAAGAATTTCAAGAAGAGTATGAAGAATATCTAGGCACTTGCGTAAAGAATTTGGAAGAAGGGCTGTATGTTGTTACAAACTATGATAATAGTAAGGAGCGGATGGTAATAGGGAATCTCGTGGATCAAAATGTTGTTTGTGATTGTCATAAATTTGAAACATATGGTATCTTATGCAGTCATGCTTTGAAAGTTTTAGATGTTATGAATATTAAGTTAATTCCTCATCACTATATACTGAAGCGATGGACAAGAGATGCAAGGTTAGGAAATAATCAAGATTTAAAAAAGAAACATATTGAATTGGATATAAAAGCTCATTTCATGGAGCGATACAATGAGTTATGTCCCCGAATGGTTAAACTGATCCACAAAGCTTCAAAGTCTCATGAAACTTACACATTTTTATCCAAAGTTTATGAAGAGTCCGATAAAACAATTGATGATATGTTGACTAAAAAGTTTGTGGGTGGAGAATCACTTGAAACGCGTCATGCATCCGTATCCATTGGCAATGAAAAAATTGACAACAATGTGGAAACTGTTGATGTTGATGGAGAAAAGAGTATAAAGAAGCTGAGATTGTTCAAATAA 2130 0.362 MNSLSENLNVSKIPIVEDVEKKCVKNIQHEEHRVVDYTYTPHLDMEFESEAAAYEFYNEYSRVTGFGIRREYGNKSRKDGTLTSRRFTCFKEGMQNVDKRRNLIKEGREGRVETRTGCDARMVISLDRKIGKYKVVDFVGQHNHALLPPGYVNMVRSHRRISESQTSHILVGEKKSRLKQKVFRKEVSNEVDGMDGIGCTRQESKNYLPTRRMRSLMYGEVGALLMHFKRQSENPSFFYDFQLDVEQQITNVFWADAQMINDYGCFGDVVTFDTTYKINKDNRPLGVFVGVNNHKQMVVFGATLLYDETVPSFQWLFETFLQAMGGEKPKTILTDQDSAMATAISLVMPETFHGLCTWRIRENAMRHVDHLYQKGSQVCSDFEACIDLHEEEGEFLNAWNVLLAEHNVLKDSWLHSIFQLKEKWAWAYVRKKFTAGMRSIQLSESFNSELKNHLKSDLNLVQFFTHFERVVNKQRNIESEADYKSRHELPKLKMKRAPMLVQAGNIYTPTIFEEFQEEYEEYLGTCVKNLEEGLYVVTNYDNSKERMVIGNLVDQNVVCDCHKFETYGILCSHALKVLDVMNIKLIPHHYILKRWTRDARLGNNQDLKKKHIELDIKAHFMERYNELCPRMVKLIHKASKSHETYTFLSKVYEESDKTIDDMLTKKFVGGESLETRHASVSIGNEKIDNNVETVDVDGEKSIKKLRLFK 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07089 709 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 34 658 IPR031052 GO:0006355
Vivi3g07089 709 SMART 26again6 557 584 IPR006564 GO:0008270
Vivi3g07089 709 ProSiteProfiles Zinc finger SWIM-type profile. 535 582 IPR007527 GO:0008270
Vivi3g07089 709 Pfam MULE transposase domain 269 363 IPR018289 -
Vivi3g07089 709 Pfam FAR1 DNA-binding domain 55 148 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07089 Vivi-Chr3 199126905 199131669 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi3g07089 MULE 1.7e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07089 - - psat:127085847 1234.55