Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07085 ATGGCTTTCAAAACTAACCAAAACGAAAACGACGAATCACCACCATACACAGTAGAACAACAAGAAGAACAAGACGATGATGATGACGAAGAAGAAGAAGTAGAAGAACAAGTGTGGGACGATTGGGAAGGAGATGACGGAGATTCAGACTCCGATTTCCTCTGTCTCTTCTGTGATTCCAATTACGATTCATGTAGCTCATTGTTCCAACATTGCGCTTCGGTTCACCACTTCGATTTTCACGCTGTTAGAAATTCTCTCAACTTAGATTTCTATGCTTCCTTCAAGCTCATTAACTATATTCGCTCCAAGGTATCAGAGAACAGTTGTTGGAGTTGTGGGTTAGCTTTTCAGTCCAAACAAGATTTGCGGAATCACTTGCATGATGTAATTGACTTCAATGCTATTAAGCCTTTGTGGGATGATGATAGATATCTAAAACCTTTCATGCAAGATGATGCATTGCTGTACAACTTTGGTGAATTTGATGAAGGTGAAGATGAACAAACTTCAATTATGGATGAAGATCTTGTGAGGGATTTGAAAAACGCTTTAGAAACAAACGGTGTTGATCAAGATGCCGTGAAAAATTTGGTGGTTGATGATCGTGCGGATGATGTTTTTAAAAGAAAGGAGACAGCTTCTGTTTCAGATGAGCGTTCAAACTCGCCCAGCTCTTCAGATAAGAAGCTTGTTAATGGGAAGGACTCAAGAGGATGTGTTTCATCCATTGATAAGGATCCTGAAGAAGGGTCTTTGATGGGTAACCCTCATAATCACATTGCAACGCATATTAAGAAGGTCAATGAAAGTTATTTTGGGTCTTACAGCTCATTTGGCATCCATCGAGAAATGTTAAGTGATAAGGCTAGAATGGATGCTTATGGTCAAGCAATTTTGAAGAATCCCTCTCTGCTAAATGGTGCTGTGGTTATGGATGTAGGTTGTGGAACTGGCATTCTCAGCCTTTTTGCCGCCCAGGCGGGGGCTTCGAGGGTCGTTGCAGTTGAGGCTAGTGCGAAGATGGCAGCAGTGGCTTCTCGGGTTGCAAAAGATAACGGTCTCTTGTTGAGTAAAAACGAAGCTAGAGTCAATGGCAACCAGAAAGGAGTCGTAGAAGTGGTCCATGGCATGGTTGAAGAAATTGACAAAATTGTTGAACTTCAACCTCACAGTGTTGATGTATTGTTAAGTGAATGGATGGGATATTGCCTGCTGTATGAATCCATGCTTGGTTCAGTGCTTTATGCACGTGACCGCTATTTGAAGCCTGGGGGTGCCATTCTTCCCGACACAGCAACTATTTTTGTTGCAGGATTTGGAAAAGGAGGTACAAGTCTTCCATTTTGGGAGAACGTGTGTGATTTTGACATGTCTAGCATTGGGGAGGAGCTTGTTACAGACGCTGCTCGATATCCTATAGTCGATGTCATAGACCACCAAGATTTAGTTACCAGTTCTACTATTCTTCAGACCTTTGACTTGGCTACCATGAAGCCCAATGAAGTGGATTTCACCGCAACTGCCTCTTTGGAACCAAAATCGAGCATTTCAGAAAACGGAAAATCACATTTTAATTCTAAAACATGTTGCTGGTGTTATGGAGTTGTCCTATGGTTTGATACTGGATTTACAAGTAGATTCTGCCGGGAAACATCAGCTGTGTTGTCAACATCCCCTTACACTCCAAAAACACACTGGTCACAAACAATCTTAACTTTCCGGGAACCTATTGCCATTGGATCGGGTGAAGATAATGCGCGAAAACCAGAAACAATTGGCACTGAAATCTATCCTGCTGCAAAGATTGATTTGCGTGTCAGCATTGTCCGTTCTACTGAGCATCGCAGCATTGACATTTCCATGGAAGCTGTTGGTGTAAGTCCTGATGGCCGGAGACGCAGTTGGCCTGCTCAACTTATTTCTCTGCAGTAG 1935 0.4253 MAFKTNQNENDESPPYTVEQQEEQDDDDDEEEEVEEQVWDDWEGDDGDSDSDFLCLFCDSNYDSCSSLFQHCASVHHFDFHAVRNSLNLDFYASFKLINYIRSKVSENSCWSCGLAFQSKQDLRNHLHDVIDFNAIKPLWDDDRYLKPFMQDDALLYNFGEFDEGEDEQTSIMDEDLVRDLKNALETNGVDQDAVKNLVVDDRADDVFKRKETASVSDERSNSPSSSDKKLVNGKDSRGCVSSIDKDPEEGSLMGNPHNHIATHIKKVNESYFGSYSSFGIHREMLSDKARMDAYGQAILKNPSLLNGAVVMDVGCGTGILSLFAAQAGASRVVAVEASAKMAAVASRVAKDNGLLLSKNEARVNGNQKGVVEVVHGMVEEIDKIVELQPHSVDVLLSEWMGYCLLYESMLGSVLYARDRYLKPGGAILPDTATIFVAGFGKGGTSLPFWENVCDFDMSSIGEELVTDAARYPIVDVIDHQDLVTSSTILQTFDLATMKPNEVDFTATASLEPKSSISENGKSHFNSKTCCWCYGVVLWFDTGFTSRFCRETSAVLSTSPYTPKTHWSQTILTFREPIAIGSGEDNARKPETIGTEIYPAAKIDLRVSIVRSTEHRSIDISMEAVGVSPDGRRRSWPAQLISLQ 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07085 644 MobiDBLite consensus disorder prediction 1 15 - -
Vivi3g07085 644 MobiDBLite consensus disorder prediction 210 258 - -
Vivi3g07085 644 Pfam C2H2 type zinc-finger (2 copies) 55 129 IPR041661 -
Vivi3g07085 644 MobiDBLite consensus disorder prediction 16 46 - -
Vivi3g07085 644 Gene3D - 432 634 - -
Vivi3g07085 644 MobiDBLite consensus disorder prediction 1 46 - -
Vivi3g07085 644 Pfam Methyltransferase domain 311 426 IPR041698 -
Vivi3g07085 644 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 275 584 IPR029063 -
Vivi3g07085 644 CDD AdoMet_MTases 311 429 - -
Vivi3g07085 644 Gene3D Vaccinia Virus protein VP39 261 430 IPR029063 -
Vivi3g07085 644 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 269 596 IPR025799 GO:0016274|GO:0018216
Vivi3g07085 644 FunFam Protein arginine N-methyltransferase 6 265 430 - -
Vivi3g07085 644 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 56 624 IPR025799 GO:0016274|GO:0018216
Vivi3g07085 644 MobiDBLite consensus disorder prediction 231 245 - -
Vivi3g07085 644 SUPERFAMILY beta-beta-alpha zinc fingers 36 169 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07085 Vivi-Chr3 198992408 198995623 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07085 27 643 C2H2 Transcription Factor Family AT3G12270 55.156 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07085 K11436 - gmx:100781879 868.226