Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07072 ATGGCTGCCATTGTTGGAGGAGCACTTCTTTCAGCTTCAATGGAGATGTTGGTGAAAAAGGTTGTTTCTGGTGAGTTTCTGGATTTGTTTCGGAGGACTAAGCTCGACGTTGAGCTGTTGGAAAAGCTGGAGATAACACTGCTGAGTCTTCAATCTGTACTTTATGATGCTGAGGACAAACAGATCACTAACCCTGCTGTCAAGAAGTGGCTGGAGATGTTGCAAGATGCCGTCTTTCAAGCTGACGAACTGTTCGACGAATTCAACACTGAAGCTTTAAGGTGCAAAGCTGAAGGTGGTCAGGTTCTTAATAAGTTTTCTTCTTATTTTAAGAGGTTTAATAAAAAGATCAATTCTAAACTACAAAAATTATTTGGAAGATTAGAACATTTGAGAAACCAAAATCTTGGATTGAAAGAAGGTGTTTCCAGCTGTGTTAGGAATATAACTCCTACAAGTCCTTTTTTAGGAGATGAATCTGCTATTTATGGCAGGGATGATGATAGAAAGAAACTCAAAGAGTTTTTGCTGTCAGAGGATGGTTGTGATAGTGGAAATAAAATAGGAGTGATTTCCATCGTGGGTATGGGAGGGTTAGGAAAAACGACACTAGCTAATCTACTTTATAATGATCGTGATGTGAAGGAGAAATTTAAGTTGAGAGGATGGTCACATATTCCAAAAGATTTTGATCTTGTCAATATCACTAAAACCATTCTTGAATCTGTCACTTCAGGAACAATTACAGACACTGACTTTGTTAAGCTTCAGGCACAATTGCAGCAAAGTTTAAGTAACAAAAAGTTTTTACTAGTATTGGATGATATATGGTACGGAAATTATGTTGGTTGGAATAAGCTAAGTGATATCTTTAATGTTGGACAAGAAGGAAGTAAGATCATCATCACAACTCGTGATGAAAGAGTTGTACTACCCATGCAAAAACTTATCTATGTGCACCATTTAAGATCTTTGGAAACTGGAGATTCATGGTCTTTACTAGCCAGACATGCATTTGTAGAAATAAACTACCAGCAACATCCCAATCTAGAAGAAGTTGGTAGAGAACTTGCCAAAAAATGTGGCGGTTTACCATTAGCTGCAATAGCACTTGGGGCTATTCTCCGGTTCATGTCACCAGATCGTTGGAGTGATGTATTAAAAAGTAGTATTTGGGAACATACAAGTGAAGATGTGAAACCATCTCTGCTACTGAGCTATCATTACCTTCCAGTTTCTCTAAAAGGATGCTTTGCTTATTGTGCAATTTTTCCAAAGAACTCAGTCTTAGTGAAAAAGACGATGGTTCAGTTGTGGATTGCAGAAGGCTTAATACCTCAGCCGAGAAATGAGAATAGATGGGAAAAAGTAGCTGAAGAATGCTTTGATAATCTAGTGCGTAGGTGTCTGATACATCGCCGCTCTATTGGGGATGGGGAAGTTTGCTTTGAAATGCACGACCTCATCAATGATTTAGCAATGGCAGTTTCATCTCCGTATTGCACTATATTGGACACACATAAGCCAGATATAAGGGTGCGATACTTGGCATACGACAGATTTGAATATAACTCAGACGATAAATTTGAAAAATTGCATGGATTAAAAAGACTACGAACTTTTCTACCCATGCCATTGGAATCTTTTGGGTATTATGAGAATTTTGTATCGTCAAAGTTATTTTCTGATTTGTTGTCAACAATGACACAATTGCACGTGTTGTCTCTTTCAAACTCTTTAAATTTCACAAAGTTACCCAACTCAATTGGAAATTTGATTTACTTGCGATACTTGAATCTCTCTTACACTAAGATTAAAAGTTTGCCTTCAGAAACGTGCAAGCTTTACAATTTGCAGACTTTGTTGTTGTCATATTGCTATAAACTCATTGAATTTCCAGAAGACATGGGAAAATTGGTGAAACTACGCCACCTTGATATCAGATGCACGAAACTGAAGAAATTGCCGAGACAAATGTCCAAATTAGAAAATCTGCAAACATTGTCGAACTTTATTGTGAGCAGCGTTAAGGATGTTGGGTTGAAGATTGAAGATCTTGGAAAATTTCCCCATCTACGAGGAAGCCTTTCCATCTCACAACTTGAAAATGTAAATGACCCATCCCATCCTTCTCAAGCAAACTTGGATTTGAAAAGAGAAATTGATAAGTTGGAACTAGGATGGTCTTACACTGCTCCTTCAAACTCACAAATACAAGTACTCGAACGGCTGCGTCCGTCGACAAATTTGAAGAGTTTGACCATCTCTGGATTTGGTGGAGACAAATTATCAAATTGGGTGGGAGATCCTTTATTTGTAAACATGGTGTGTTTGAAGATCACAGGGTGTAAAAGAATTTCAGTGCTGCCATCCGTGGGGCAACTCGGTAACCTAAAACAACTTTTTTTTAGTAAGATGGAATCTGTAAAGAGTGTTGGTACTGTGTTCTATGGAAGTGGTTCTTCTTCATTTCAACCATTTACCTCTTTAGAGATTCTAAGCTTTGAAGATATGCCAGAGTGGGAGGAATGGAAGTTGATTGGAGGTACATCTATAGAGTTTCCTAGTCTTATACGTTTGTCTCTAAACAACTGTCCAAAACTGAAAGAAAACATACCTGGCAACCTTCCTAAGCTTGAAAGTTTGTCAGTTGAAGATTGTCCCAAACTTGAAGGGATGACACCCAACAATCTTCCTTCTCTTGTCGACCTTAGGTTAAGTGGTTGTCCCTTATTGATGGGGTCAAGACATTCTATTACAAACCCACCATCTGACGTATTCAGCCAATTGGTGATTTGTCTCAATTCTCTTCAAAAGTTGACCTTAACCAATATTCCATCTCTAACATCCTTTCCGATAGACGGTCTTCCCAAAACCTTACGATCTCTCTCTATCTTTTTCTGTGAGAATCTAGAGTTCTTTTCTCATGAATCTTTTCATAATTACTCATCACTGGAGGATTTGCATATCTTCAGTAGTTGTAATTCAATGACATCATTTACCTTGGGCTCTCTCCCTGTCCTCAAAAGTCTATATATTTCTGATTGTAAACATTTAAAATCCATATCAATAGCAGAAGATGCATCGGAACCAAATCTAGTGTTTCTTAGAAGCATCACAATAGTGGAATGTGATGAACTGGAGTCAGTTTCCTTAAGTCGATTACCCATTCCTAAACTCACTGATTTATGTTTGACGTGGTGCAAAAAGTTTCGTTCTCTACCTGAATCAATAAAGTGTCTAACTAGCCTTCAAAAAATGGAAATTCATAACCTTCCAAATCTGCAATCGTTTTCCATAGATGATTTGCCGATCACTTTGCGGGAACTGACGGTCGACAAAGTTGGAGGGATTTTGTGGAATACAACTTGGCGACATCACCCTTCTCTTTCAATGCTGAGTATTTGGAGTAATGATTTTGTGAAGGGGCTGATGAGAACGCAAGTTCCGTTTCTACCCGCTAATCTCGTTTCCTTACGGATCTTTTGGCTTGAAGATATAGAATGCTTGGATGGGAAGTGGCTTCAACATCTAACCTCTCTCCATACGCTTGCGATTTATGAGGCACCCAAGCTCAAGTCATTGCCAGAAAAGGGGGACTTGCCTTCCTCTCTTAAAGAACTGCATATCATAAGATGTCCGCTGTTGGAAGCAAATTTGCAGAGGAAGAAAGGGAAAGAGTGGAGTAAGATTTCTCACATTCCCAAAATATATTTAACTAACGAAAATCATCGAATGAGTATTACATCAAGGTTTTGGTTTCATTTGGGGTTCAAATTGAAATGA 3786 0.3838 MAAIVGGALLSASMEMLVKKVVSGEFLDLFRRTKLDVELLEKLEITLLSLQSVLYDAEDKQITNPAVKKWLEMLQDAVFQADELFDEFNTEALRCKAEGGQVLNKFSSYFKRFNKKINSKLQKLFGRLEHLRNQNLGLKEGVSSCVRNITPTSPFLGDESAIYGRDDDRKKLKEFLLSEDGCDSGNKIGVISIVGMGGLGKTTLANLLYNDRDVKEKFKLRGWSHIPKDFDLVNITKTILESVTSGTITDTDFVKLQAQLQQSLSNKKFLLVLDDIWYGNYVGWNKLSDIFNVGQEGSKIIITTRDERVVLPMQKLIYVHHLRSLETGDSWSLLARHAFVEINYQQHPNLEEVGRELAKKCGGLPLAAIALGAILRFMSPDRWSDVLKSSIWEHTSEDVKPSLLLSYHYLPVSLKGCFAYCAIFPKNSVLVKKTMVQLWIAEGLIPQPRNENRWEKVAEECFDNLVRRCLIHRRSIGDGEVCFEMHDLINDLAMAVSSPYCTILDTHKPDIRVRYLAYDRFEYNSDDKFEKLHGLKRLRTFLPMPLESFGYYENFVSSKLFSDLLSTMTQLHVLSLSNSLNFTKLPNSIGNLIYLRYLNLSYTKIKSLPSETCKLYNLQTLLLSYCYKLIEFPEDMGKLVKLRHLDIRCTKLKKLPRQMSKLENLQTLSNFIVSSVKDVGLKIEDLGKFPHLRGSLSISQLENVNDPSHPSQANLDLKREIDKLELGWSYTAPSNSQIQVLERLRPSTNLKSLTISGFGGDKLSNWVGDPLFVNMVCLKITGCKRISVLPSVGQLGNLKQLFFSKMESVKSVGTVFYGSGSSSFQPFTSLEILSFEDMPEWEEWKLIGGTSIEFPSLIRLSLNNCPKLKENIPGNLPKLESLSVEDCPKLEGMTPNNLPSLVDLRLSGCPLLMGSRHSITNPPSDVFSQLVICLNSLQKLTLTNIPSLTSFPIDGLPKTLRSLSIFFCENLEFFSHESFHNYSSLEDLHIFSSCNSMTSFTLGSLPVLKSLYISDCKHLKSISIAEDASEPNLVFLRSITIVECDELESVSLSRLPIPKLTDLCLTWCKKFRSLPESIKCLTSLQKMEIHNLPNLQSFSIDDLPITLRELTVDKVGGILWNTTWRHHPSLSMLSIWSNDFVKGLMRTQVPFLPANLVSLRIFWLEDIECLDGKWLQHLTSLHTLAIYEAPKLKSLPEKGDLPSSLKELHIIRCPLLEANLQRKKGKEWSKISHIPKIYLTNENHRMSITSRFWFHLGFKLK 1261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07072 1261 Gene3D - 152 317 IPR027417 -
Vivi3g07072 1261 SUPERFAMILY L domain-like 485 916 - -
Vivi3g07072 1261 SUPERFAMILY L domain-like 933 1227 - -
Vivi3g07072 1261 Gene3D Ribonuclease Inhibitor 1035 1251 IPR032675 -
Vivi3g07072 1261 Gene3D - 14 129 - -
Vivi3g07072 1261 PANTHER DISEASE RESISTANCE PROTEIN RP 40 846 IPR044974 GO:0006952
Vivi3g07072 1261 PRINTS Disease resistance protein signature 361 375 - -
Vivi3g07072 1261 PRINTS Disease resistance protein signature 190 205 - -
Vivi3g07072 1261 PRINTS Disease resistance protein signature 263 277 - -
Vivi3g07072 1261 PRINTS Disease resistance protein signature 896 912 - -
Vivi3g07072 1261 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 421 IPR027417 -
Vivi3g07072 1261 FunFam Probable disease resistance protein At1g61300 148 315 - -
Vivi3g07072 1261 Coils Coil 40 60 - -
Vivi3g07072 1261 Gene3D - 407 495 IPR036388 -
Vivi3g07072 1261 Gene3D Ribonuclease Inhibitor 506 896 IPR032675 -
Vivi3g07072 1261 FunFam Probable disease resistance protein At1g63360 407 495 - -
Vivi3g07072 1261 Gene3D - 324 406 IPR042197 -
Vivi3g07072 1261 Gene3D Ribonuclease Inhibitor 897 1034 IPR032675 -
Vivi3g07072 1261 Coils Coil 114 134 - -
Vivi3g07072 1261 Pfam NB-ARC domain 169 388 IPR002182 GO:0043531
Vivi3g07072 1261 Pfam Rx N-terminal domain 10 102 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07072 Vivi-Chr3 198824931 198832706 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07072 188 812 WRKY Transcription Factor Family AT5G45050 23.426 5.16e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07072 - - vvo:131593262 2513.03