Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07058 ATGGCGGCTATTCTTGGAGGAGCACTTCTATCGGCTTCCATGGAGATGTTGGTGAAAAAGATTGTTTCTAGTGAGTTTCTTGATTTGTTTCGGAGGACTAAGCTTGACGTTGAGCTGTTGGATAAGCTGGAGATAACACTGCTGAGTCTTCAATCTGTACTTTATGATGCTGAGGACAAACAGATCACTAACCCTGCTGTCAAGAAGTGGCTGGAGATGTTGCAAGATGCTGTCTTTGAAGCTGACCAACTGTTCGACGAACTCAACACTGAAGCTTTAAGGTGCAAAGCTGAAGGTGGTCAGGTTCTTAATAAGTTTTTGTCTTATTTTAAAAGGTTTAATAAAAAGATCAATTCTAAACTGCAAAAATTATTTGAAAGATTAGAACATTTGAGAAACCAAAATCTTGGATTGAAAGAAACTGTTTCCAGCGGTGTTTGGAGTATAACTCCTACAAGTCCTTTTTTGGGAGATGAATCTGCTATTTATGGCAGAGATGATGACAAAAAGAAACTCAAAGAGTTTTTGCTGTCAGAGGATGGTTGTGATGGTGGAAGTAAAATAGGAGTGATTTCCATTGTGGGTATGGGAGGGTTAGGAAAAACAACACATGCTAATCTCCTTTACAATGATCCTGATGTGAAGGAGAACTTTGAAGTTAGAGGGTGGGCACATATTCCAAAAGATTTTGTTGAGGTCACAGTCACTAAAACAATTCTTGAATCTGTCACTCAAAAAACAATTGCTGAGACTAACTTTGTTAAACTCAAAGTACAATTGCAGCAAACTTTAAAGGACAAAATGTTCTTGTTAGTATTAGATGATATGACGCATGAAAACTATCTTGAGTGGAATAGTCTAAGTGATATCTTTAATGTTGGGCAAATAGGAAGTAAGGTCATCATCACAGGTCGAGATGAAAGAGTTGCACTACCCACATTAAAATCTCTCTATGTCCACCGTTTAAGCTCTTTGGAAATTGAAGATTCCTGGTCTTTACTAGCCAGGCATGCATTTGTAGAAAGAAACTACCAACAACACCCCGATCTAGAAGAAATTGGTAGAGAAATTACAAAAAAATGTGGCGGTTTACCATTAGCTGCAATAGCACTTGGGGGTATTCTCCGGTTCATGTCACCGGATCGTTGGAGTGATGTGTTAAACAGTAGTATCTGGGAACAGACAAATGATGTGGTGCAGCCAGCTCTGCTATTGAGCTATCGTTATCTTCCAACTTCTTTAAAAGGATGCTTTGCTTATTGTTCAATTTTTCCAAAGAATTCAATCTTACTGAAAAAGACGGTGGTTCAGTTGTGGATGGCAGAAGACTTAATACCTCAGCAGAATAGTGAGAAAAGTTGGGAAAAAGTAGCTGAAGAATACTTTGATGAACTAGTTTCGAGGTCTCTTATACTTCAACGGTCCATTGATGATAAGTCAGAAGAGTTCATTGGTGATGAAAAAGCATGCTTTGAAATGCACGACCTCATCAATGATTTAGCTATGACAGTATCATCTCCATATTGCACTAGGTTGGACAAACATAGGCTAGATGAAAGGGTAGATAAAAGAGTGAGACACTTGTCATTCGATAAGGAAGAATATAACTCATACGATAAATTTGAAATATTGCATGGATTAAAAGGTCTACGAACCTTTCTACCCATGCCATTGCAAGATTCATCGGAGTATTCTAATTCCGTGTTGTCGAAATTATTTTCTGAATTGTTGTCGACAATGACACAATTACACGTGTTGTCACTTTCACACTTCGAAAATATCACTGAGATGCCAAAATCTATTGGAAATTTGATATATTTGCGATACTTGAATCTCTCTAGCACTCGAATTGAAAGTTTGCCTTCAGAAACATGCAAGCTTTACAATTTGCAGACGTTGTTGTTGTCAAGATGCGAGGAACTCACTGAATTGCCAAAAGACATGGGGAAATTGGTGAAACTACGCCACCTTGACATCCGAGGCACTAAATTGGAGAAAATGCCGGCACAAATGTCCAAATTAAAAAATCTACATACATTGTCTGACTTTATTGTGAGTAGTGTTAAGGAGTTTGGATTGGAGATTGAAGATCTTGGAAAATATCCCCATCTACGAGGAAGTCTTTCCATCTCACAACTTGAAAATGTGATTGACTCATCCCATGCTTCTCAAGCAAACTTGGAGATGAAAAAAGAAATTGACGAGTTGGAATTAAGATGGTCTCACATTGTTCCTTCAAACTCACAAATACAAGTACTCGAATGGTTGCGTCCGACGACAAATTTGAAGAGTTTGACCATCTACAAATTTGGTGGAGACAAATTATCAAATTGGGTGGGAGATCCTTTATTTGTAAACATGGTGTGTTTGAAGATCACAAGGTGTAAAAAAATTTCAGTGCTGCCATCTCTGGGGAAACTAAGTAATCTTAAAGAACTCTCATTTTCTGGGATGCATTCACTAAAGAGTGTTGATACCATGTTCTATGGAAGTGGCTCTTCTTCATTTCAACCATTTATCTCTTTAGAGACTCTGAGCTTTGAAGATATGCCAGAGTGGGAGCAATGGAAGTTGATTGGAGGTACATCTATAGAGTTTCCTAGTCTTATATGCTTGTCTCTAGACAGCTGTCCAAAACTGAAAGAAAACATACCTAGCAACCTTCCTAAGCTTGAAAGTTTGTCACTTAAACATTGTCCCAAACTTGAAGGGATGACACCCAACAATCTTCCTTCTCTTGCCGTCCTTAGCTTAAGTGATTGTCCCTTATTGATGGGGTCAAAACATTCTATCACAAACCCACCATCTGGCTTATTCAGCCAATTGGTGATTTGTCTCAATTCTCTTCAAAAGTTGACCTTATACAATATTCCATCTCTAACATCCTTTCCGATAGACGGTCTTCCAAAAACCTTACGATCTCTCTCTATCACTCTTTGTAGGAACCTGGAGTTCTTTTCTCATGAATCTTTTCATAATTACTCATCACTCGAGGAATTGGAGATATCCAATAGTTGTGATTCAATGACATCATTTACCTTGGGCTCTCTCCCTGTCCTCAAAAGTCTACATATTTCCGATTGTAAACATTTAAAATCCATATCAATAGCAGAAGATGCATCCGAACCAAATCTAGTGTTTCTTAGAATCATCGCAATAGGGGTATGTGATGAACTGGAGTCAGTTTCCTTAAGTCGATTACCCATTCCTAAACTCAGTTATTTAAGTTTGTGGGGTTGTAAGAAGTTAAGTTCTCTACGATTCACTCTAACTAGCCTTCAAGAAATGGCAATTCATCACCTTCCAAATCTGCAATCTTTTCCCATAGATATGCTTATCAATTTGCGGGAACTGTCGGTCGGCAATGTTGGAGGGATTTTGTGGAATATAACTTGGCAACATCACACTTCTCTTTCAAAGCTGGCTATTTGGGGTGATGATATTGTGAAGGCGCTGATGGAAAGCCAAGTTCCGTTTCTACCCACTAATCTCGTTTCCTTACGTATCTATGGTTTTGAAGATATAGAATGCTTGGATGGGAAGTGGCTTCAACATCTCACCTCTCTCCATACACTTGATATTGGTTATGCACTCAAGCTCAAGTCGTTGCCAGAAAAGGGGGAATTGCCTTGCTCTCTTAAAAAACTGCATATCAATTATTGTCCGTTGTTGGAAGCAAATTTGCAGAGGAAGAAAGGGAAAGAGTGGCGTAAGATTTCTCACATTCCCATAATATATGTAAACGACGAAATCATTGAATGA 3762 0.3852 MAAILGGALLSASMEMLVKKIVSSEFLDLFRRTKLDVELLDKLEITLLSLQSVLYDAEDKQITNPAVKKWLEMLQDAVFEADQLFDELNTEALRCKAEGGQVLNKFLSYFKRFNKKINSKLQKLFERLEHLRNQNLGLKETVSSGVWSITPTSPFLGDESAIYGRDDDKKKLKEFLLSEDGCDGGSKIGVISIVGMGGLGKTTHANLLYNDPDVKENFEVRGWAHIPKDFVEVTVTKTILESVTQKTIAETNFVKLKVQLQQTLKDKMFLLVLDDMTHENYLEWNSLSDIFNVGQIGSKVIITGRDERVALPTLKSLYVHRLSSLEIEDSWSLLARHAFVERNYQQHPDLEEIGREITKKCGGLPLAAIALGGILRFMSPDRWSDVLNSSIWEQTNDVVQPALLLSYRYLPTSLKGCFAYCSIFPKNSILLKKTVVQLWMAEDLIPQQNSEKSWEKVAEEYFDELVSRSLILQRSIDDKSEEFIGDEKACFEMHDLINDLAMTVSSPYCTRLDKHRLDERVDKRVRHLSFDKEEYNSYDKFEILHGLKGLRTFLPMPLQDSSEYSNSVLSKLFSELLSTMTQLHVLSLSHFENITEMPKSIGNLIYLRYLNLSSTRIESLPSETCKLYNLQTLLLSRCEELTELPKDMGKLVKLRHLDIRGTKLEKMPAQMSKLKNLHTLSDFIVSSVKEFGLEIEDLGKYPHLRGSLSISQLENVIDSSHASQANLEMKKEIDELELRWSHIVPSNSQIQVLEWLRPTTNLKSLTIYKFGGDKLSNWVGDPLFVNMVCLKITRCKKISVLPSLGKLSNLKELSFSGMHSLKSVDTMFYGSGSSSFQPFISLETLSFEDMPEWEQWKLIGGTSIEFPSLICLSLDSCPKLKENIPSNLPKLESLSLKHCPKLEGMTPNNLPSLAVLSLSDCPLLMGSKHSITNPPSGLFSQLVICLNSLQKLTLYNIPSLTSFPIDGLPKTLRSLSITLCRNLEFFSHESFHNYSSLEELEISNSCDSMTSFTLGSLPVLKSLHISDCKHLKSISIAEDASEPNLVFLRIIAIGVCDELESVSLSRLPIPKLSYLSLWGCKKLSSLRFTLTSLQEMAIHHLPNLQSFPIDMLINLRELSVGNVGGILWNITWQHHTSLSKLAIWGDDIVKALMESQVPFLPTNLVSLRIYGFEDIECLDGKWLQHLTSLHTLDIGYALKLKSLPEKGELPCSLKKLHINYCPLLEANLQRKKGKEWRKISHIPIIYVNDEIIE 1253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07058 1253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 421 IPR027417 -
Vivi3g07058 1253 Pfam Rx N-terminal domain 10 102 IPR041118 -
Vivi3g07058 1253 Gene3D - 406 503 IPR036388 -
Vivi3g07058 1253 PRINTS Disease resistance protein signature 263 277 - -
Vivi3g07058 1253 PRINTS Disease resistance protein signature 908 924 - -
Vivi3g07058 1253 PRINTS Disease resistance protein signature 361 375 - -
Vivi3g07058 1253 PRINTS Disease resistance protein signature 190 205 - -
Vivi3g07058 1253 Gene3D - 154 314 IPR027417 -
Vivi3g07058 1253 Gene3D Ribonuclease Inhibitor 940 1235 IPR032675 -
Vivi3g07058 1253 FunFam Probable disease resistance protein At1g63360 407 503 - -
Vivi3g07058 1253 Pfam Leucine rich repeat 607 664 IPR001611 GO:0005515
Vivi3g07058 1253 PANTHER DISEASE RESISTANCE PROTEIN RP 40 824 IPR044974 GO:0006952
Vivi3g07058 1253 Coils Coil 114 141 - -
Vivi3g07058 1253 Gene3D Ribonuclease Inhibitor 556 939 IPR032675 -
Vivi3g07058 1253 SUPERFAMILY L domain-like 493 928 - -
Vivi3g07058 1253 Gene3D - 14 129 - -
Vivi3g07058 1253 Gene3D - 324 405 IPR042197 -
Vivi3g07058 1253 Pfam NB-ARC domain 166 388 IPR002182 GO:0043531
Vivi3g07058 1253 SUPERFAMILY L domain-like 945 1239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07058 Vivi-Chr3 198763605 198774946 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07058 594 680 WRKY Transcription Factor Family AT4G12020 37.500 2.67e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07058 - - vvo:131593262 1889.77