Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07048 ATGTCTAGCCGCGGTGGAGGAAACCATCCCAAAAATCGCCGGAGTCGATCATCTCCTGCACATTCTCAAAAATCACCCGTCAATGCTGTAGGATCAGGCCGTGGTGGTGGTGGTCGTGGCTCTTGCGGTGGATGTATCGCCGGTTCTTCTTCCTCCAGACATCCACCTCCATCGTCATATGCTTCGCCATCGGTCACCCCTACTCCTACTCCTCCATCTGTTGCAGCTCCGATGAAAGAAAAAGTATGTGGTATTTACTTCAGTGATTTTACTTCTAATGAACTAGAAGCCGCTGAAGGACTTCTTTTGTTGCAAACACAAACACAAGTGAGGGAGAATGAGAGGAAATTGAAAATAACTTTTAATGGCAAAGCGATTTGTGAAAGAAACATCATCAACAATGTTCATCCAATGTTACAAAACAACAATGTTCATGCAATGTTAGATAACAACATTCCTAATATTGTCATGGAAAACGAATACAATCCTCCAGATATACCGAATATTCACGGTGTACCGAACAATAGGATTCTGGTATGTTGCAAACCATTTGAGAAAAAACTAACATCGAGTGATTTAAACGCATATCAAAATAGATTACTTTTGAAGAAAGATCACGTTGAAACATATTTTCTACCTTCGTTGAAAAGAGATGAAGAAGTTAACAAAGGAATAAATGTCGTTGTATTTGACATGCAAGGAAAAACATTTAACACGATGTTCAAATTCTGGAGTAATAAATATTATGTCTTCAATGGAGTTGGGTGGCAGAAATTCTTCAAAGAACATAATTTGAAAGCGGATCAAGATTTTATTACGGTGTGGATGTTTCGTCATTCTGAAATCAATAACTTATGCTTTGCTCTTAGTATAAGAAGAGTGGAAGCTTAA 891 0.3861 MSSRGGGNHPKNRRSRSSPAHSQKSPVNAVGSGRGGGGRGSCGGCIAGSSSSRHPPPSSYASPSVTPTPTPPSVAAPMKEKVCGIYFSDFTSNELEAAEGLLLLQTQTQVRENERKLKITFNGKAICERNIINNVHPMLQNNNVHAMLDNNIPNIVMENEYNPPDIPNIHGVPNNRILVCCKPFEKKLTSSDLNAYQNRLLLKKDHVETYFLPSLKRDEEVNKGINVVVFDMQGKTFNTMFKFWSNKYYVFNGVGWQKFFKEHNLKADQDFITVWMFRHSEINNLCFALSIRRVEA 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07048 296 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 129 291 IPR005508 GO:0003677
Vivi3g07048 296 MobiDBLite consensus disorder prediction 45 59 - -
Vivi3g07048 296 SMART B3_2 184 295 IPR003340 GO:0003677
Vivi3g07048 296 CDD B3_DNA 184 293 IPR003340 GO:0003677
Vivi3g07048 296 ProSiteProfiles B3 DNA-binding domain profile. 185 295 IPR003340 GO:0003677
Vivi3g07048 296 MobiDBLite consensus disorder prediction 1 73 - -
Vivi3g07048 296 Gene3D - 184 296 IPR015300 -
Vivi3g07048 296 SUPERFAMILY DNA-binding pseudobarrel domain 184 288 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07048 Vivi-Chr3 198679704 198682752 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07048 143 289 B3 DNA Binding Superfamily AT4G03170 34.228 2.12e-20 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07048 - - vvo:131659703 529.25