Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07047 ATGTTGAAGATGAAAGAAAAATTATGTGGTCATTATCTCTGTGAGTTTTCTTCTGATGAATATGAAGTTGCCGAAGCACTTATTTTACTGCAAAGACAAGTCCAAAAAGTGAATGAGAAAAAGTTGAAAATAACTTTTGGTGGCAAACCAATTTGTGAAAGAAACAACTTTAACAATGTTCAACCAATGCTGCCGATCAATATTCCTAATGTTGAATACGTTCCTCCAGATATACCGAATATTCACGGTGTACCGAACAATAGGATTCTGGTATGTTGCAAACCATTTGAGAAAAAATTAACATCGAGTGATTTAGACGTATACCAAAATAGATTACTTTTAAAGAAAAATCACGTTGAAACATATTTTCTACCCTCGTTGAAAAGAGATGAAAAAGTCGACAAAGGAATAAATGTCATTGTATTTGACATGCAAGGAAAAACATTTAACACGATGTTCAAATTCTGGAGTGAGAAATATTATGTTTTCAACGGAGTTGGATGGCAGAAATTCTTCAAAGAACGTAATTTGAAAGCGGATCAAGATTTTATTACGGTTTGGATGTTTCGTCATTCTGAAATCAATAAGTTATGTTTTGCTCTTAGTATAAGAAGAGTGGAAGCTTAA 627 0.327 MLKMKEKLCGHYLCEFSSDEYEVAEALILLQRQVQKVNEKKLKITFGGKPICERNNFNNVQPMLPINIPNVEYVPPDIPNIHGVPNNRILVCCKPFEKKLTSSDLDVYQNRLLLKKNHVETYFLPSLKRDEKVDKGINVIVFDMQGKTFNTMFKFWSEKYYVFNGVGWQKFFKERNLKADQDFITVWMFRHSEINKLCFALSIRRVEA 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07047 208 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 77 203 IPR005508 GO:0003677
Vivi3g07047 208 CDD B3_DNA 96 205 IPR003340 GO:0003677
Vivi3g07047 208 Gene3D - 96 208 IPR015300 -
Vivi3g07047 208 SUPERFAMILY DNA-binding pseudobarrel domain 96 200 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07047 Vivi-Chr3 198666102 198666728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07047 21 201 B3 DNA Binding Superfamily AT4G03170 33.163 3.33e-20 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07047 - - vvo:131659699 400.208