Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07026 ATGGCCTCAATGTCAGCATCTGGTTCATGGAGTGGTAAGGAGAACAAAGCATTTGAAAGGGCATTAGCTGTTTTCGATAAGGACACGCCTGATCGTTGGTCCAATGTTGCTAAAGCTATTGGTGGAGGGAAGACTGCTGAGGATGTCAAGAGACACTATGAACTTCTTGTTAGGGACATTAGGCACATTGAATCAGGTCAAGTTCCATTCCCAAATTACAACAACAATGCTGCCTTCGACGAGGAGAAAAGGTTTAGAAACATATGA 267 0.4345 MASMSASGSWSGKENKAFERALAVFDKDTPDRWSNVAKAIGGGKTAEDVKRHYELLVRDIRHIESGQVPFPNYNNNAAFDEEKRFRNI 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07026 88 CDD SANT 9 57 IPR001005 -
Vivi3g07026 88 SUPERFAMILY Homeodomain-like 8 65 IPR009057 -
Vivi3g07026 88 Gene3D - 2 70 - -
Vivi3g07026 88 ProSiteProfiles Myb-like domain profile. 8 57 IPR001005 -
Vivi3g07026 88 SMART sant 6 59 IPR001005 -
Vivi3g07026 88 FunFam Transcription factor SRM1 2 70 - -
Vivi3g07026 88 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 78 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07026 Vivi-Chr3 198352465 198353432 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vivi3g07026 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07026 - - gmx:100804396 139.813