Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06992 ATGGCTGCCATTGTTGGAGGAGCACTTCTGACAGCTTCCATGGAGATGCTGGTGAAAAAGGTCGTTTCTGGTGAGTTTATTGATTTGTTTCGGAGGACTAAGCTGGACGTTGAGCTGTTGGAAAAGCTGGAGATTACACTGCTGAGTCTTCAATCTGTACTTTATGATGCTGAGGACAAACAGATCACTAACCCTGCTGTCAAGAAGTGGCTGGAGATGTTGCAAGATGCTGTCTTTCAAGCTGACCAACTGTTCGACGAACTCAACACTGAAGCTTTAAGGTGCCAAGTTGAAGCTGATCAGGTTCTTAAAAAGTTTTTAGATTATTTTAAAAGGTTTAATAAAAAGATCAACTCTAAATTGCAAAAATTATTTGGAAGATTAGAACATTTGAGAAACCAAAATCTTGGATTGAAAGAAGGTGTTTCCAGCTGTGTTAGGAATATAACTCCTACAAGCCCTTTTTTAGGAAATGAATATGATATTAAAGGCAGAGATGATGACAAAAAGAAACTTAAAGAGTTTCTGCTGTCAGAGGGTGGCAATGATGGTGGAAGTAAAATAGGAGTGATTTCCATTGTGGGTATGGGAGGGTTAGGAAAAACAACACTAGCTAAACTCCTTTACCATGACCGTGATGTGAAGGACAAGTTTGATGTTAGAGGGTGGGCACATATTCCAAAAGATTTTGATGCTGTCACTATCACTAAAACCATTCTTAAATCTGTCAATTCAGGAACAATTAGAGAAGCTGACTTAGTTAAACTCGAAGATCAGTTGCAGCAAAGTTTAAGTAACAAAAAGTTTTTGTTAGTACTGGATGATATATGGTATGGAAACTATGTTGGTTGGATTAGTCTAAGTGATATCTTTAATGTTGGACAAATAGGAAGTAAGATCATCATCACAACTCGAGATGTAAGAGTCGCACTACCCAAGCAAAAATCTCTCCATGTCCACCATTTAAGATCTTTGGAAACTGAAGATTCATGGTCTTTACTAGCCAGACATGCATTTGTAGAAAGAAACTGCCAACAACATCCCAGTTTAGAAATAACTGGTAGAGAAATTGCCAAAAAATGTGGCGGTTTACCATTAGCTGCAATAGCACTTGGGGGTATTCTCCGGTTCATGTCACCGGATCGTTGGAGTGATGTGTTAAAAAGTAGTATTTGGGAACATACAAGTGAAGTTGTGGAACCATCTCTACTACTGAGCTATCATTACCTTCCAGCTTCTCTAAAAGGATGCTTTGCTTATTGTGCAATTTTTCCAAAGAACTCAGTCTTAGTGAAAAAGACGATGGTTCAGTTGTGGATTGCAGAAGGCTTAATACCTCAGCCAAAAAATGAGAATAGTTGGGAAAAAGTAGCTGAAGAATTCTTTGATGAGTTAATGTCTAGGTCTCTGATACGTCAACGGTCTATTGATGATAGGTCAGAACAATTCAATGGTGATGAAGATGTTTGGTTTGAAATGCATGACCTCATCAATGATTTAGCTATGGCAGTTTCATCTCCGTATTGCACTATGTTGGACACAAATAAGCCAAATCCAAGGGTGCAATACTTGGCATACGACAGATTTGAATATAACTCAGACGATGAATTTGAAAAATTGCATGGATTAAAAAGACTACGAACTTTTCTACCCATGCCGTTGCAATCTTTAGGGGTTTATGATAATTCTGTATCGTCAAAGTTATTTTCTGATTTGTTGTCAACAATGACACAATTACACGTGTTGTCTCTTTCAAACTCTTTAAATATCACAAAGTTACCCAACTCTATTGGAAATTTGATTTACTTGCGATACTTGAATCTCTCTTACACTGAGATTAAAAGTTTGCCTTCAGAAACGTGCAAGCTTTACAATTTGCAGACGTTGTTGTTGTCATATTGCTATAAACTCGATGAATTGCCAGAAGACATGGGAAAATTGGTGAAGCTACGCCACCTTGACATTAGAGGCACTAAATTGAAGAAAATGCCGGCACAAATGTCCAAATTAGAAAATCTGCAAACATTGTCGTACTTTATTGTGAGCGGCGTTAAGGATGTTGGGTTGAAGATTGAAGATCTTGGAAAATTTCCCCATCTACGAGGAAGCCTTTCCATCTCACAACTTGAAAATGTAATTGACTCATCCCATTCTTCTCAAGCAAACTTGGAGTCGAAGAAAGAAATTGACGAGTTGGAACTAGGATGGTCTTACACTGCTCCTTCAAACTCACAAATACAAAGTGTTGCATTGGAGCGACTGCGCCCGTCGACAAATTTGAAGAGTTTGACCATCTCTGGATTTGGTGGAGACAAATTATCAAATTGGGTGGGAGATTCTTTATTTGTAAACATGGTGTGTTTGAAGATCACAAGGTGTAAAAAAATTTCAGTGCTGCCATCCTTGGGGCAACTCGGTAATCTAAAAGAACTTTTTTTTAGTGAGATGGAATCTGTTAAAAGTGTTGGTACCGTATTCTATGGAAGTGGTTCTTCTTCATTTCAACCATTTGCCTCTTTAGAGACTCTACGCTTTGAATTTATGCCAGAGTGGGAGGAATGGGAGTTGATTGGAGGTACATCTATAGAGTTTCCTAGTCTTATTAGCCTTAGGTTAAGGGACTGTCCAAAACTGAAAGAAAACATACCTGGCAACCTTCCTAAGCTTGAAAGTTTGTCACTTGAAGTTTGTCCCAAACTTGAAGGGATGACACCCAACAATCTTCCTTCTCTTGCGGTCCTTATGTTAGAGGAATGTCCCTTATTGATGGGTTCAAGACAGTCTATTACAAACCCACCATTTGACATATTCAGCCAATTGGTGATTTGTCTCAATTCTCTTCAAAAGTTGAAGTTATACAGAATTCGATCTCTAACATCCTTTCCGATAGACGGCCTTCCCAAAACCTTACGATCTCTCTCTATCTTTTACTGTGAGAATCTGGAGTTCTTTTCTCATGAATCTTTTCACAATTACTCGTCACTTGAGGATTTGCATATATTAAATAGTTGTAATTCAATGACATCATTTACCTTGGGCTCTCTCCCTGTCCTCAAAAGTCTAGATATTAAGAATAGTGAACATTTAAAATCCATATCAATAGCAGAAGATGCATCGGAACCAAATCTAATGTTTCTTAGAAGCATCAGAATACATAGCTGTGATGAACTGGAGTCAGTTTCCTTAAGTCGATTACCCATTCCTAAACTCACTTATTTAAGTTTGCGGAGTTGTGAGAAGTTAAGTTTCATAGAACCAATAAAGACTCTAACTAGCCTTCAAGAAATGCAAATTAATGACCTTCCAAATCTGCAATTTCTACCTGAATCAATGAAGACTCTAACTAGCCTTCAACAAATGACAATTACTGGCCTTCCAAATCTGCAATCGTTTTCCATAGATGATATGCCTATCAATTTGCAGCAACTATTGGTCCGCGAAGTTGGAGGGATTTTGTGGAATACAACTTGGCAACATCTCACTTCTCTTTCAATGCTGCGTATTAAGAGTGATGATATTGTGAAGGGGCTGATGAAAACGCAAGTTCCGTTTCTACCCACTAATCTCGTTTCCTTGGGGATCTTTGAGCTTAAAGATATAGAATGTTTGGATGGGAAGTGGCTTCAACATCTCACCTCTCTCCATAAACTTGTGATTGATCATGCACCCAAGCTTCAGTCGTTGCCAGAAAAGGGGGAATTGCCTTCCTCTCTTGAAGAACTGCATATCAGATATTGTCCGTTGTTGAAAGCAAATTTGCAGAGGAAGAAAGGGAAAGAGTGGAGTAAGATTTCTCACATTCCCTCAATAGTTATAGACTTCAAAACCATCAAATGA 3837 0.3839 MAAIVGGALLTASMEMLVKKVVSGEFIDLFRRTKLDVELLEKLEITLLSLQSVLYDAEDKQITNPAVKKWLEMLQDAVFQADQLFDELNTEALRCQVEADQVLKKFLDYFKRFNKKINSKLQKLFGRLEHLRNQNLGLKEGVSSCVRNITPTSPFLGNEYDIKGRDDDKKKLKEFLLSEGGNDGGSKIGVISIVGMGGLGKTTLAKLLYHDRDVKDKFDVRGWAHIPKDFDAVTITKTILKSVNSGTIREADLVKLEDQLQQSLSNKKFLLVLDDIWYGNYVGWISLSDIFNVGQIGSKIIITTRDVRVALPKQKSLHVHHLRSLETEDSWSLLARHAFVERNCQQHPSLEITGREIAKKCGGLPLAAIALGGILRFMSPDRWSDVLKSSIWEHTSEVVEPSLLLSYHYLPASLKGCFAYCAIFPKNSVLVKKTMVQLWIAEGLIPQPKNENSWEKVAEEFFDELMSRSLIRQRSIDDRSEQFNGDEDVWFEMHDLINDLAMAVSSPYCTMLDTNKPNPRVQYLAYDRFEYNSDDEFEKLHGLKRLRTFLPMPLQSLGVYDNSVSSKLFSDLLSTMTQLHVLSLSNSLNITKLPNSIGNLIYLRYLNLSYTEIKSLPSETCKLYNLQTLLLSYCYKLDELPEDMGKLVKLRHLDIRGTKLKKMPAQMSKLENLQTLSYFIVSGVKDVGLKIEDLGKFPHLRGSLSISQLENVIDSSHSSQANLESKKEIDELELGWSYTAPSNSQIQSVALERLRPSTNLKSLTISGFGGDKLSNWVGDSLFVNMVCLKITRCKKISVLPSLGQLGNLKELFFSEMESVKSVGTVFYGSGSSSFQPFASLETLRFEFMPEWEEWELIGGTSIEFPSLISLRLRDCPKLKENIPGNLPKLESLSLEVCPKLEGMTPNNLPSLAVLMLEECPLLMGSRQSITNPPFDIFSQLVICLNSLQKLKLYRIRSLTSFPIDGLPKTLRSLSIFYCENLEFFSHESFHNYSSLEDLHILNSCNSMTSFTLGSLPVLKSLDIKNSEHLKSISIAEDASEPNLMFLRSIRIHSCDELESVSLSRLPIPKLTYLSLRSCEKLSFIEPIKTLTSLQEMQINDLPNLQFLPESMKTLTSLQQMTITGLPNLQSFSIDDMPINLQQLLVREVGGILWNTTWQHLTSLSMLRIKSDDIVKGLMKTQVPFLPTNLVSLGIFELKDIECLDGKWLQHLTSLHKLVIDHAPKLQSLPEKGELPSSLEELHIRYCPLLKANLQRKKGKEWSKISHIPSIVIDFKTIK 1278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06992 1278 Pfam Rx N-terminal domain 13 102 IPR041118 -
Vivi3g06992 1278 FunFam Probable disease resistance protein At1g63360 407 503 - -
Vivi3g06992 1278 Pfam NB-ARC domain 167 407 IPR002182 GO:0043531
Vivi3g06992 1278 Gene3D - 324 406 IPR042197 -
Vivi3g06992 1278 SUPERFAMILY L domain-like 493 930 - -
Vivi3g06992 1278 SUPERFAMILY L domain-like 938 1264 - -
Vivi3g06992 1278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 421 IPR027417 -
Vivi3g06992 1278 PANTHER DISEASE RESISTANCE PROTEIN RP 40 972 IPR044974 GO:0006952
Vivi3g06992 1278 PRINTS Disease resistance protein signature 190 205 - -
Vivi3g06992 1278 PRINTS Disease resistance protein signature 906 922 - -
Vivi3g06992 1278 PRINTS Disease resistance protein signature 263 277 - -
Vivi3g06992 1278 PRINTS Disease resistance protein signature 361 375 - -
Vivi3g06992 1278 Coils Coil 40 60 - -
Vivi3g06992 1278 Gene3D - 407 503 IPR036388 -
Vivi3g06992 1278 Gene3D Ribonuclease Inhibitor 1123 1265 IPR032675 -
Vivi3g06992 1278 Gene3D - 153 317 IPR027417 -
Vivi3g06992 1278 Gene3D Ribonuclease Inhibitor 514 904 IPR032675 -
Vivi3g06992 1278 Gene3D Ribonuclease Inhibitor 922 1122 IPR032675 -
Vivi3g06992 1278 Coils Coil 114 134 - -
Vivi3g06992 1278 Gene3D - 14 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06992 Vivi-Chr3 198192656 198218707 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06992 537 676 WRKY Transcription Factor Family AT4G12020 33.333 6.79e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06992 - - vvo:131593262 2001.87