Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06968 ATGGGAGGGTTAGGAAAATCAACATTAGCTAAACTCCTTTACAATGACACAGAAGTGAAGGATACATTTAAGGTGAGAGGATGGTCACATATTCCAAAAGTTATGGATGTTGTCACTGTCACTAAAATCATTCTTGAATCTGTCACTGCAGAAACAGTTGATGAGACTAACTTTGTTAAACTCCAAGAAAAATTGCATAAAACTTTAAGTGGCAAAATGTTCTTGTTAGTATTGGATGATATGGCACATGAAAACTATCTTGATTGGAATAGTCTAAGTGATATCTTTAATGCTGGGCAAATAGGAAGTAAGGTCATCATCACAGGTCGAGATGAAAGAGTTGCACTACCCACATTTAAATCTCTCTATGTCCACCGTTTAAGCTCTTTGGAAACTGAAGATTCCTGGTCTTTACTAGCCAGGCATGCATTTGTAGAAAGAAACTACCAACAACACCCCGATCTAGAAGAAATTGGTAGAGAAATTGCCAAAAAATGTGGCGGTTTACCATTAGCTGCAATAGCACTTGGGGGTATTCTCCGGTTCATGTCACCGGATCGTTGGAGTTATGTGTTAAACAGTAGTATCTGGGAACAGACAAATGATGCCGTGCAGCCAGCTCTGCTATTGAGCTATCGTTATCTTCCAACTTCTTTAAAAGGATGCTTTGCTTATTGTTCAATTTTTCCAAAGAACTCAATCTTAGTGAAAAAGATGGTGGTTCAGTTGTGGATTGCCGAAGACTTAATACCTCAGCAGAATAGTGAAAAAAGTTGGGAAAAAGTAGCTGAGGAATACTTTGATGAACTAGTTTCGAGGTCTCTTATATTTCAACGGTCCATTGATGATAAGTCAAAAAGTTTCATTGGTGATGAAAAAGCATGCTTTGAAATGCACGACCTCATCAATGATTTGGCTATGACAGTTTCATCTCCATTTTGTTCTAGGTTGGACAAACATACGCCAACTGAAATGGTTGATAAAAAGGTGCGACACTTGTCATATGACAGATTAGAATATAACTCATATGATAAGTTTGATAAATTGCATGGATTAAAAGGTCTACGAACCTTTCTACCCATGTCTTTGAATGATACATGGGTCGACAATTCCGTCTCGTCGAAGTTATTTTCTGACTTGTTGTCGACAATGACGCAATTACACGTGTTGTCACTTTCACACTATGAAAATATCACTGAATTACCCACCTCTATTGGAAACTTGATATACCTGCGATACTTGAATCTCTCTTACACTCGAATTAAAAGGTTGCCTTCAGAAACATGCAAGCTTTACAATTTGCAGACTTTGTTGTTGTCATATTGCTATAAACTCATTGAATTGCCAAAGGACATGGGGAAATTGGTGAAACTACGCCACCTTGACATCAGACGCACTCCATTGAAGAAAATGCCTGCACAACTATCTAGACTAGAAAATCTACAAACATTGTCCGACTTTGTTGTAAGCAACACTAAGGACGGTGCATTGAAAATTGAAGATCTTGGAAAATATCCCCATCTACAGGGAAGTCTTTCCATCTCACAACTTGAAAATGTAACTGACCCATCCCATGCTTCTCAAGTAAACATGGAGATGAAAAAAGAAATTGAAGAGTTGGAACTAGGATGGTCTTACAATGCTCTTTCAAACTCACAAATAGAAGTACTTGAACGACTGCGTCCATCGACAAATTTGAAGAGTTTGACCATCTCTGGATTTGGTGGAGACAAATTATCAAATTGGGTGGGAGATCCTTTATTTGTAAACTTGGTGCGTTTGATGATCTCTGGATGTAAAAACTGTTCAAGGATGCCATCCTTAGGGAAACTAAGTAATCTTAAAAAACTCTTTATTAGCGGGATGCAATCAATAAAGAGTGTTGATACTGTGATCTATGGAAGTGATTCTGCTTCATTTCAACCGTTCACCTCTTTAGAGACTCTGAGATTTGAAGATATGCCACAGTGGGAGGAATGGAAGTTGATTGGAGGTACATCTATTGAGTTTCCTAGTCTTATACATTTGTCTGTACACCACTGTCCAAAACTCAAAGAAACCATACCTGGCAACCTTCCTAAGCTTGAAAGATTGTCACTTGAAAAATGTCCCAAACTTGAAGGGATGACACCCATCAATCTTCCTTCTCTTGCCAACCTTAACTTAAAGGATTGTCCCTTGTTGATGGGGTCAAGACATTCTATCACAAACCCACCATCTAACGTATTCAGCCAATTGGTGATTTGTCTCAATTCTCTTCAAAAGTTGACCTTATACAGAATTCCATCTCTAACATCCTTTCCGATAGACGGTCTTCCCAAAACCTTACGATCTCTCTATATTGATTATTGTGAGAATCTAGAGTTCCTTTCTTATGAATCTTTTCATAATTACTCATCACTCGAGGATTTGAATATATCCAGTAGTTGTAATTCAATGACATCATTTATCTTGGGCTCTCTCCCTGTCCTCAAAAGTCTATATATTTACGGATGTGAACATTTAAAATCCATATCCATAGCAGAAGATGCATCGGAACAAAATCTAGTGTTTCTTAGAACCATCATAATAGAGAGTTGTAATGAACTAGAGTCGGTTTCCTTAACTGGATTACCCATTCCTAAACTCACTCGTTTAAGTTTGTGGCGTTGTAAGAAGTTAAGTTCTCTATCTGAATCAATAAAGAATCTAACTAGCCTTCAACATATGGAAATTCTTGAGCTTCCAAATCTCCAATCGTTTCCCATAGATGATATGCCTATCAATTTGTGGGAACTGTCGGTCGGCAATGTTGGAGGGATTTTGTGGAATACAACTTGGCAACATCTCACTTGTCTTTCAAAGTTGTCTCTTTATTTTGATGATATTGTGAAGGGGGTGATGAGAATGCAAGTTCCATTTCTACCCACTAATCTCGTTTCCTTAGTGATCTCTGATTTTGAAGATATAGAATGCTTGGATGGGAAGTGGCTTCAACATCTCTCCACTCTCCATAAACTTGAGATTTGTAACTCACCCAAGCTCAAGTCATTGCCAGAAAAGGGGGAATTGCCTTCCTCTCTTAAAGAACTATATATCAATTTTTGTCCGTTGTTGAAAGAAAATTTGCGGAGGAAGAAAGGGAAAGAGTGGCTTAAGATTTGTCACATTCCCAAAATATTTATAAACTGGAAAATCATCGAATGA 3186 0.3788 MGGLGKSTLAKLLYNDTEVKDTFKVRGWSHIPKVMDVVTVTKIILESVTAETVDETNFVKLQEKLHKTLSGKMFLLVLDDMAHENYLDWNSLSDIFNAGQIGSKVIITGRDERVALPTFKSLYVHRLSSLETEDSWSLLARHAFVERNYQQHPDLEEIGREIAKKCGGLPLAAIALGGILRFMSPDRWSYVLNSSIWEQTNDAVQPALLLSYRYLPTSLKGCFAYCSIFPKNSILVKKMVVQLWIAEDLIPQQNSEKSWEKVAEEYFDELVSRSLIFQRSIDDKSKSFIGDEKACFEMHDLINDLAMTVSSPFCSRLDKHTPTEMVDKKVRHLSYDRLEYNSYDKFDKLHGLKGLRTFLPMSLNDTWVDNSVSSKLFSDLLSTMTQLHVLSLSHYENITELPTSIGNLIYLRYLNLSYTRIKRLPSETCKLYNLQTLLLSYCYKLIELPKDMGKLVKLRHLDIRRTPLKKMPAQLSRLENLQTLSDFVVSNTKDGALKIEDLGKYPHLQGSLSISQLENVTDPSHASQVNMEMKKEIEELELGWSYNALSNSQIEVLERLRPSTNLKSLTISGFGGDKLSNWVGDPLFVNLVRLMISGCKNCSRMPSLGKLSNLKKLFISGMQSIKSVDTVIYGSDSASFQPFTSLETLRFEDMPQWEEWKLIGGTSIEFPSLIHLSVHHCPKLKETIPGNLPKLERLSLEKCPKLEGMTPINLPSLANLNLKDCPLLMGSRHSITNPPSNVFSQLVICLNSLQKLTLYRIPSLTSFPIDGLPKTLRSLYIDYCENLEFLSYESFHNYSSLEDLNISSSCNSMTSFILGSLPVLKSLYIYGCEHLKSISIAEDASEQNLVFLRTIIIESCNELESVSLTGLPIPKLTRLSLWRCKKLSSLSESIKNLTSLQHMEILELPNLQSFPIDDMPINLWELSVGNVGGILWNTTWQHLTCLSKLSLYFDDIVKGVMRMQVPFLPTNLVSLVISDFEDIECLDGKWLQHLSTLHKLEICNSPKLKSLPEKGELPSSLKELYINFCPLLKENLRRKKGKEWLKICHIPKIFINWKIIE 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06968 1061 SUPERFAMILY L domain-like 749 1047 - -
Vivi3g06968 1061 Gene3D Ribonuclease Inhibitor 361 740 IPR032675 -
Vivi3g06968 1061 Gene3D - 129 210 IPR042197 -
Vivi3g06968 1061 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 226 IPR027417 -
Vivi3g06968 1061 Gene3D - 1 118 IPR027417 -
Vivi3g06968 1061 Pfam NB-ARC domain 1 193 IPR002182 GO:0043531
Vivi3g06968 1061 FunFam Probable disease resistance protein At1g63360 212 308 - -
Vivi3g06968 1061 Gene3D Ribonuclease Inhibitor 920 1052 IPR032675 -
Vivi3g06968 1061 Gene3D Ribonuclease Inhibitor 750 919 IPR032675 -
Vivi3g06968 1061 SUPERFAMILY L domain-like 298 733 - -
Vivi3g06968 1061 PRINTS Disease resistance protein signature 68 82 - -
Vivi3g06968 1061 PRINTS Disease resistance protein signature 166 180 - -
Vivi3g06968 1061 PRINTS Disease resistance protein signature 690 706 - -
Vivi3g06968 1061 PANTHER DISEASE RESISTANCE PROTEIN RP 1 657 IPR044974 GO:0006952
Vivi3g06968 1061 Gene3D - 211 308 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06968 Vivi-Chr3 198040774 198046522 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06968 398 484 WRKY Transcription Factor Family AT4G12020 40.909 3.35e-09 59.3