Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06963 ATGGCGGCTATTGTTGGAGGAGCACTTCTTTCAGCTGCTATGGAGATGTTGGTGAAAAAGATTGTTTCTCGTGAATATGTTGCTTTATTACGGAGGACTGAGCGTGACGATGAGTTGTTGGAAAAGCTGAAGATAACACTGCTGAGTCTTCAATCTGTACTTCATGATGCTGAGGACAAGCAGATCACTAATCCTGCGGTCAAGGAGTGGCTGAACAGGCTGCAAGATGCTGTCTTTCAAGTTGACGATTTGTTTGACGAAATCAACACTGAGGCTTTAAGGCGTCAAGTGGAAGCTGGCCAGGTTCTTAAAAAACTTTCTTCTCGTTTTAAAAGGTTTAATAAAAAGATCAATTATAAACTGACAAAGTTATTTAAAACACTAGAACATTTGAGAGACCAGAATCTTGGACTGAGAGGTGATTCCAACTGTGTTTGGAATGTAACTCCTACAAGTTCGGTTTTGGGAGATGAATCTGCTATTTATGGCAGAGATGATGACAAAAATAAATTGAAAGAGTTTTTGCTGTCAGAGGATGGTTGTGATAGTGGAAATAAAATAGGAGTGATTTCCATTGTGGGTATGGGAGGGTTAGGAAAATCAACATTAGCTAAACTCCTTTACAATGACACAGAAGTGAAGGATACATTTAAGGTGAGAGGATGGTCACATATTCCAAAAGTTATGGATGTTGTCACTGTCACTAAAATCATTCTTGAATCTGTCACTGCAGAAACAGTTGATGAGACTAACTTTGTTAAACTCCAAGAAAAATTGCATAAAACTTTAAGTGGCAAAATGTTCTTGTTAGTATTGGATGATATGGCACATGAAAACTATCTTGATTGGAATAGTCTAAGTGATATCTTTAATGCTGGGCAAATAGGAAGTAAGGTCATCATCACAGGTCGAGATGAAAGAGTTGCACTACCCACATTTAAATCTCTCTATGTCCACCGTTTAAGCTCTTTGGAAACTGAAGATTCCTGGTCTTTACTAGCCAGGCATGCATTTGTAGAAAGAAACTACCAACAACACCCCGATCTAGAAGAAATTGGTAGAGAAATTGCCAAAAAATGTGGCGGTTTACCATTAGCTGCAATAGCACTTGGGGGTATTCTCCGGTTCATGTCACCGGATCGTTGGAGTTATGTGTTAAACAGTAGTATCTGGGAACAGACAAATGATGCCGTGCAGCCAGCTCTGCTATTGAGCTATCGTTATCTTCCAACTTCTTTAAAAGGATGCTTTGCTTATTGTTCAATTTTTCCAAAGAACTCAATCTTAGTGAAAAAGATGGTGGTTCAGTTGTGGATTGCCGAAGACTTAATACCTCAGCAGAATAGTGAAAAAAGTTGGGAAAAAGTAGCTGAGGAATACTTTGATGAACTAGTTTCGAGGTCTCTTATATTTCAACGGTCCATTGATGATAAGTCAAAAAGTTTCATTGGTGATGAAAAAGCATGCTTTGAAATGCACGACCTCATCAATGATTTGGCTATGACAGTTTCATCTCCATTTTGTTCTAGGTTGGACAAACATACGCCAACTGAAATGGTTGATAAAAAGGTGCGACACTTGTCATATGACAGATTAGAATATAACTCATATGATAAGTTTGATAAATTGCATGGATTAAAAGGTCTACGAACCTTTCTACCCATGTCTTTGAATGATACATGGGTCGACAATTCCGTCTCGTCGAAGTTATTTTCTGACTTGTTGTCGACAATGACGCAATTACACGTGTTGTCACTTTCACACTATGAAAATATCACTGAATTACCCACCTCTATTGGAAACTTGATATACCTGCGATACTTGAATCTCTCTTACACTCGAATTAAAAGGTTGCCTTCAGAAACATGCAAGCTTTACAATTTGCAGACTTTGTTGTTGTCATATTGCTATAAACTCATTGAATTGCCAAAGGACATGGGGAAATTGGTGAAACTACGCCACCTTGACATCAGACGCACTCCATTGAAGAAAATGCCTGCACAACTATCTAGACTAGAAAATCTACAAACATTGTCCGACTTTGTTGTAAGCAACACTAAGGACGGTGCATTGAAAATTGAAGATCTTGGAAAATATCCCCATCTACAGGGAAGTCTTTCCATCTCACAACTTGAAAATGTAACTGACCCATCCCATGCTTCTCAAGTAAACATGGAGATGAAAAAAGAAATTGAAGAGTTGGAACTAGGATGGTCTTACAATGCTCTTTCAAACTCACAAATAGAAGTACTTGAACGACTGCGTCCATCGACAAATTTGAAGAGTTTGACCATCTCTGGATTTGGTGGAGACAAATTATCAAATTGGGTGGGAGATCCTTTATTTGTAAACTTGGTGCGTTTGATGATCTCTGGATGTAAAAACTGTTCAAGGATGCCATCCTTAGGGAAACTAAGTAATCTTAAAAAACTCTTTATTAGCGGGATGCAATCAATAAAGAGTGTTGATACTGTGATCTATGGAAGTGATTCTGCTTCATTTCAACCGTTCACCTCTTTAGAGACTCTGAGATTTGAAGATATGCCACAGTGGGAGGAATGGAAGTTGATTGGAGGTACATCTATTGAGTTTCCTAGTCTTATACATTTGTCTGTACACCACTGTCCAAAACTCAAAGAAACCATACCTGGCAACCTTCCTAAGCTTGAAAGATTGTCACTTGAAAAATGTCCCAAACTTGAAGGGATGACACCCATCAATCTTCCTTCTCTTGCCAACCTTAACTTAAAGGATTGTCCCTTGTTGATGGGGTCAAGACATTCTATCACAAACCCACCATCTAACGTATTCAGCCAATTGGTGATTTGTCTCAATTCTCTTCAAAAGTTGACCTTATACAGAATTCCATCTCTAACATCCTTTCCGATAGACGGTCTTCCCAAAACCTTACGATCTCTCTATATTGATTATTGTGAGAATCTAGAGTTCCTTTCTTATGAATCTTTTCATAATTACTCATCACTCGAGGATTTGAATATATCCAGTAGTTGTAATTCAATGACATCATTTATCTTGGGCTCTCTCCCTGTCCTCAAAAGTCTATATATTTACGGATGTGAACATTTAAAATCCATATCCATAGCAGAAGATGCATCGGAACAAAATCTAGTGTTTCTTAGAACCATCATAATAGAGAGTTGTAATGAACTAGAGTCGGTTTCCTTAACTGGATTACCCATTCCTAAACTCACTCGTTTAAGTTTGTGGCGTTGTAAGAAGTTAAGTTCTCTATCTGAATCAATAAAGAATCTAACTAGCCTTCAACATATGGAAATTCTTGAGCTTCCAAATCTCCAATCGTTTCCCATAGATGATATGCCTATCAATTTGTGGGAACTGTCGGTCGGCAATGTTGGAGGGATTTTGTGGAATACAACTTGGCAACATCTCACTTGTCTTTCAAAGTTGTCTCTTTATTTTGATGATATTGTGAAGGGGGTGATGAGAATGCAAGTTCCATTTCTACCCACTAATCTCGTTTCCTTAGTGATCTCTGATTTTGAAGATATAGAATGCTTGGATGGGAAGTGGCTTCAACATCTCTCCACTCTCCATAAACTTGAGATTTGTAACTCACCCAAGCTCAAGTCATTGCCAGAAAAGGGGGAATTGCCTTCCTCTCTTAAAGAACTATATATCAATTTTTGTCCGTTGTTGAAAGAAAATTTGCGGAGGAAGAAAGGGAAAGAGTGGCTTAAGATTTGTCACATTCCCAAAATATTTATAAACTGGAAAATCATCGAATGA 3768 0.3816 MAAIVGGALLSAAMEMLVKKIVSREYVALLRRTERDDELLEKLKITLLSLQSVLHDAEDKQITNPAVKEWLNRLQDAVFQVDDLFDEINTEALRRQVEAGQVLKKLSSRFKRFNKKINYKLTKLFKTLEHLRDQNLGLRGDSNCVWNVTPTSSVLGDESAIYGRDDDKNKLKEFLLSEDGCDSGNKIGVISIVGMGGLGKSTLAKLLYNDTEVKDTFKVRGWSHIPKVMDVVTVTKIILESVTAETVDETNFVKLQEKLHKTLSGKMFLLVLDDMAHENYLDWNSLSDIFNAGQIGSKVIITGRDERVALPTFKSLYVHRLSSLETEDSWSLLARHAFVERNYQQHPDLEEIGREIAKKCGGLPLAAIALGGILRFMSPDRWSYVLNSSIWEQTNDAVQPALLLSYRYLPTSLKGCFAYCSIFPKNSILVKKMVVQLWIAEDLIPQQNSEKSWEKVAEEYFDELVSRSLIFQRSIDDKSKSFIGDEKACFEMHDLINDLAMTVSSPFCSRLDKHTPTEMVDKKVRHLSYDRLEYNSYDKFDKLHGLKGLRTFLPMSLNDTWVDNSVSSKLFSDLLSTMTQLHVLSLSHYENITELPTSIGNLIYLRYLNLSYTRIKRLPSETCKLYNLQTLLLSYCYKLIELPKDMGKLVKLRHLDIRRTPLKKMPAQLSRLENLQTLSDFVVSNTKDGALKIEDLGKYPHLQGSLSISQLENVTDPSHASQVNMEMKKEIEELELGWSYNALSNSQIEVLERLRPSTNLKSLTISGFGGDKLSNWVGDPLFVNLVRLMISGCKNCSRMPSLGKLSNLKKLFISGMQSIKSVDTVIYGSDSASFQPFTSLETLRFEDMPQWEEWKLIGGTSIEFPSLIHLSVHHCPKLKETIPGNLPKLERLSLEKCPKLEGMTPINLPSLANLNLKDCPLLMGSRHSITNPPSNVFSQLVICLNSLQKLTLYRIPSLTSFPIDGLPKTLRSLYIDYCENLEFLSYESFHNYSSLEDLNISSSCNSMTSFILGSLPVLKSLYIYGCEHLKSISIAEDASEQNLVFLRTIIIESCNELESVSLTGLPIPKLTRLSLWRCKKLSSLSESIKNLTSLQHMEILELPNLQSFPIDDMPINLWELSVGNVGGILWNTTWQHLTCLSKLSLYFDDIVKGVMRMQVPFLPTNLVSLVISDFEDIECLDGKWLQHLSTLHKLEICNSPKLKSLPEKGELPSSLKELYINFCPLLKENLRRKKGKEWLKICHIPKIFINWKIIE 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06963 1255 Gene3D - 147 312 IPR027417 -
Vivi3g06963 1255 Pfam Rx N-terminal domain 10 102 IPR041118 -
Vivi3g06963 1255 PRINTS Disease resistance protein signature 189 204 - -
Vivi3g06963 1255 PRINTS Disease resistance protein signature 262 276 - -
Vivi3g06963 1255 PRINTS Disease resistance protein signature 360 374 - -
Vivi3g06963 1255 PRINTS Disease resistance protein signature 884 900 - -
Vivi3g06963 1255 FunFam Probable disease resistance protein At1g63360 406 502 - -
Vivi3g06963 1255 Gene3D Ribonuclease Inhibitor 555 934 IPR032675 -
Vivi3g06963 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 420 IPR027417 -
Vivi3g06963 1255 Coils Coil 40 60 - -
Vivi3g06963 1255 Pfam NB-ARC domain 165 387 IPR002182 GO:0043531
Vivi3g06963 1255 SUPERFAMILY L domain-like 943 1241 - -
Vivi3g06963 1255 Gene3D - 11 130 - -
Vivi3g06963 1255 SUPERFAMILY L domain-like 492 927 - -
Vivi3g06963 1255 Gene3D - 323 404 IPR042197 -
Vivi3g06963 1255 PANTHER DISEASE RESISTANCE PROTEIN RP 30 851 IPR044974 GO:0006952
Vivi3g06963 1255 Gene3D Ribonuclease Inhibitor 1114 1246 IPR032675 -
Vivi3g06963 1255 Gene3D Ribonuclease Inhibitor 943 1113 IPR032675 -
Vivi3g06963 1255 Gene3D - 405 502 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06963 Vivi-Chr3 198040406 198047501 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06963 592 678 WRKY Transcription Factor Family AT4G12020 40.909 3.87e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06963 - - vvo:131593262 1816.97