Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06958 ATGGCGACTATTGTTGGAGGAGCACTTCTTTCAGCTTCCATGGAGATGCTGGTGGGAAAGATTGTTTCTGGCGAGTTTGTTACCTTATTTCGGAGGACTAATCTTGACGTTGACCTTTTGGAAAAGCTGGAGATAACACTGCTGAGTCTTCAATCTGTACTTTATGATGCTGAAGACAAACAGATCGCTAATCCTGCTATCAAGAAGTGGCTGGAAATGTTGCAAGATGTTGTCTTTGAAGCTGACAAACTGTTCGACGAACTCAACACTGAAGCTTTAAGGTGCCAAGCTGAAGCTGGCCAGGTTCTTAATAAGTTTTTGTCTTATTTTAAAAGGTTTAATAAAAAGATCAATTCTAAATTGCACAAATTATTTGAAAAAATAGAACATTTGAGAAAGCAGAAACTTGGATTGAAAGAATGTGATTCCAACAATGTTTGGAATGTAACTCCTACAACTTCTATTTTGGGAGATGAATCTGCTATTTGTGGAAGAACTGATGAGAGAGAGAAGCTTAAAGAGTTTTTGTTGTCAGAGGAAGGTTGTGACAGTGGAAATAAAATAGGAGTGATTTCCATTGTGGGTATGGGAGGATTAGGAAAAACAACACTAGTTAAACTCCTTTACAATGATGATGATGTGAAGGAGAAATTTGAGGTGAGAGGGTGGACACATATTCCAAAAGATCTTGATATTTTTACAGTCACTAAAACCATTCTTGAATCTGTCACTTCAAGAACAATTACAGATACTAACTTGGATAAACTCCAAGTACAATTGCAACAAACATTAAGTAACACAAAGTTTTTACTAGTATTAGATGATATATGGCATGGAAAATATGTTGGTTGGAATAGTCTAAATGATATCTTTAATGTTGGGCATAAAGGGAGTAAGATCATCATCACAACCCGAGATGAAAGAGTTGTACTACCCATGCAAAAATTTCTCTATGTCCACCATTTAAGATCTTTGGAAACTGAAGATTCATGGTCTTTACTAGCCAGACATGCATTTGTAGAAAGAAACTGCCAACAACATTCAAATCTAGAAACAATTGGTAGAGAAATTGTCAAAAAATGTGGTGGCTTACCATTACCTGTAGTAACACTAGGGGGTATTCTTCGCTCCAAATTGTCACCTGATCACTGGAGTGATGTATTAAATAGTAGTATTTGGGAACAGACAAATGATGAGGTGCAGCCATCTCTGCTATTGAGCTATCGTTATCTTCCTGCTCCTTTAAAAGGATGCTTTGCTTATTGTTCAGTTTTTCCAAAGAACTCAATCTTAGTGAAAAAGATTGTGATTCAGTTGTGGATTGCAGAAGGCTTAATACCTCAGCCCCAAAGTGACAAAAGTTGGGAAAAAGTAGCCGAAAAATACTTTGATGAACTAGTGTCTAGGTCTTTGATACGTCAACATTCCATTGATGATGAGTCAAAAGGCTTCATTAGTGATGAGAAATTATGCTTTGAAATGCACGATCTCATCAATGATTTAGCTATGACAGTTTCATCCCCATATTGCACTAGGCTAGACAATCATAAGGCAAGTGAGAAAGTAGATAAAAGGGTGCGACACTTGTCATACAACAGATCAGTATATGACTCGGAAGATAAATTTGAAAAATTCCATGGATTAAAAGGTCTACAAACTTTTGTACCCATGCCATTGCATTTTTTATGGCATTATGATAATTTTGGGTTGTCGAAGTTATTTTTTGACATTTTGTCGACAATGACACAATTACGTGTGCTGTCTCTTTCAAACTACAAAAATATCACAGAGTTACCCAACTCTATTGGAAATTTGATATGTCTGCGATACTTGAATCTCTCTAGAACTCATATTAAGAGGTTGCCTTCAGAAACATGCAAGCTTTACAATTTGCAGACATTGTTGTTGTCAAGATGCGAGGAACTCACTGATTTGCCAAAGGACATGGGGAAATTGGTGAAACTACGCCACCTTGACATCAGGGACACTAAATTGAAGAAAATGCCGACACAAATATCCAAATTAAAAAATCTACAAACATTGTCGGACTTTATTGTGAGCAACGTTAAGGATGGTGGGTTGAAGATTGAGGATCTTGGAAAATATCCCCATCTATCAGGAAGCCTTTGCATCTCACAACTTGAAAATGTAACTGACCCATTCCTTGCTTCTCAAGCAAACTTGGAGATGAAAAAGGAAATTGACAAGTTGAAACTAGGTTGGTCTTATCCTGCTCCTTCAAACTCACCGATACAAAGTGCTGTATTGGAACGGTTGCGTCCGTCTACAAATTTGAAGCGTCTGATCCTCTCTGGATACAGTGGAGACAAATTACCAAGTTGGTTGGGCGATCCTTTGATTGGTTGTCTTAATTCTCTTCAAAAGATGACCTTAGAAAACATTTCATCACTAACATCTTTTCCGAGCAACAGTTTTCCCAAAACCTTACAATCTCTCAAAATTAAGGGTTGTGATTCATTGCCATCATTTACCTTGTGCTCTCTCCCAGTCCTCAAAAGTCTAATTATTAGAAGCTGTAAACATTTAAAATCTCTCATAATTGCAGAAGATGCATTGAAACAAAATCTTTTGTTTCTTAGAACCATTGATATATATGATTGCAATGAGCTGGAGTCGGTTTCCTTAAATGGATTTCCCATTCCTAACCTCTCTTATTTAAGTTTGTGGAATTGTGAGAAGTTATGTTCTCTACCTGAATCAATAAAGACTCTAACTAGCCTTCAAAAAATGGAAATTATTGACCTTCCAAATTTGCAATCGTTTTCCATAGATGATATACCTATCAATTTGCGGGAATTATCGGTCAGCGAAGTTGGAGGGATTTTGTGGAATAAAACTTGGAAACATCTCACTTCTCTTTCAGTGTTGTTGCTTTTGTCTGATGATATTGTGAAGGCTATGATGAAAACTAAAGTTTCGTTTCTACCCACTAAACTCGTTTCCTTACGAATCTATGGTCTTGAAGATATAGAATGCTTGGATGGAAAGTGGCTTCAACATCTCACCTCTCTCCATACACTGGAGATTTATGACGCACCTAAGCTCAAGTCGTTGCCAGATCAGGGGGAGTTGCCTTCCTCTCTTAAAGTACTGCATATCTATAAATGTCCGTTATTGGAAGCAAATTTGCAGAGGAAGCAAGGGAAAGAGTGGAGTAAGATTTCTCACATTCCTTAA 3198 0.3721 MATIVGGALLSASMEMLVGKIVSGEFVTLFRRTNLDVDLLEKLEITLLSLQSVLYDAEDKQIANPAIKKWLEMLQDVVFEADKLFDELNTEALRCQAEAGQVLNKFLSYFKRFNKKINSKLHKLFEKIEHLRKQKLGLKECDSNNVWNVTPTTSILGDESAICGRTDEREKLKEFLLSEEGCDSGNKIGVISIVGMGGLGKTTLVKLLYNDDDVKEKFEVRGWTHIPKDLDIFTVTKTILESVTSRTITDTNLDKLQVQLQQTLSNTKFLLVLDDIWHGKYVGWNSLNDIFNVGHKGSKIIITTRDERVVLPMQKFLYVHHLRSLETEDSWSLLARHAFVERNCQQHSNLETIGREIVKKCGGLPLPVVTLGGILRSKLSPDHWSDVLNSSIWEQTNDEVQPSLLLSYRYLPAPLKGCFAYCSVFPKNSILVKKIVIQLWIAEGLIPQPQSDKSWEKVAEKYFDELVSRSLIRQHSIDDESKGFISDEKLCFEMHDLINDLAMTVSSPYCTRLDNHKASEKVDKRVRHLSYNRSVYDSEDKFEKFHGLKGLQTFVPMPLHFLWHYDNFGLSKLFFDILSTMTQLRVLSLSNYKNITELPNSIGNLICLRYLNLSRTHIKRLPSETCKLYNLQTLLLSRCEELTDLPKDMGKLVKLRHLDIRDTKLKKMPTQISKLKNLQTLSDFIVSNVKDGGLKIEDLGKYPHLSGSLCISQLENVTDPFLASQANLEMKKEIDKLKLGWSYPAPSNSPIQSAVLERLRPSTNLKRLILSGYSGDKLPSWLGDPLIGCLNSLQKMTLENISSLTSFPSNSFPKTLQSLKIKGCDSLPSFTLCSLPVLKSLIIRSCKHLKSLIIAEDALKQNLLFLRTIDIYDCNELESVSLNGFPIPNLSYLSLWNCEKLCSLPESIKTLTSLQKMEIIDLPNLQSFSIDDIPINLRELSVSEVGGILWNKTWKHLTSLSVLLLLSDDIVKAMMKTKVSFLPTKLVSLRIYGLEDIECLDGKWLQHLTSLHTLEIYDAPKLKSLPDQGELPSSLKVLHIYKCPLLEANLQRKQGKEWSKISHIP 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06958 1065 Gene3D Ribonuclease Inhibitor 563 932 IPR032675 -
Vivi3g06958 1065 PANTHER DISEASE RESISTANCE PROTEIN RP 40 874 IPR044974 GO:0006952
Vivi3g06958 1065 Pfam Rx N-terminal domain 11 102 IPR041118 -
Vivi3g06958 1065 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 422 IPR027417 -
Vivi3g06958 1065 Gene3D - 148 317 IPR027417 -
Vivi3g06958 1065 Pfam NB-ARC domain 168 390 IPR002182 GO:0043531
Vivi3g06958 1065 SUPERFAMILY L domain-like 494 1044 - -
Vivi3g06958 1065 Gene3D - 18 129 - -
Vivi3g06958 1065 Coils Coil 40 60 - -
Vivi3g06958 1065 Gene3D - 324 407 IPR042197 -
Vivi3g06958 1065 FunFam Probable disease resistance protein At1g63360 408 504 - -
Vivi3g06958 1065 Gene3D Ribonuclease Inhibitor 933 1057 IPR032675 -
Vivi3g06958 1065 FunFam Probable disease resistance protein At1g61300 149 315 - -
Vivi3g06958 1065 Coils Coil 114 134 - -
Vivi3g06958 1065 Gene3D - 408 504 IPR036388 -
Vivi3g06958 1065 PRINTS Disease resistance protein signature 263 277 - -
Vivi3g06958 1065 PRINTS Disease resistance protein signature 190 205 - -
Vivi3g06958 1065 PRINTS Disease resistance protein signature 579 595 - -
Vivi3g06958 1065 PRINTS Disease resistance protein signature 361 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06958 Vivi-Chr3 197864922 197868236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06958 595 681 WRKY Transcription Factor Family AT4G12020 40.909 7.38e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06958 - - vvo:131593262 1177.93