Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06955 ATGGAGATGTTGGTGACAAAGGTTGTTTCTGGTGAGTTTCTTGATTTGTTTCGGAGGACTAAGCTTGACGTTGAGCTGTTGGAAAAGCTGGAGATAACACTGCTGAGTCTTCAATCTGTACTTTATGATGCTGAGGACAAACAGATCACTAACCCTGCTGTCAAGAAGTGGCTGGAGATGTTGCAAGATGCCGTCTTTCAAGCTGACGAACTGTTCGACGAATTCAACACTGAAGCTTTAAGGTGCAAAGCTGAAGGTGGTCAGGTTCTTAATAAGTTTTTGTCTTATTTTAAGAGGTTTAATAAAAAGATCAATTCTAAACTACAAAAATTATTTGGAAGATTAGAACATTTGAGAAACCAAAATCTTGGATTGAAAGAAGGTGTTTCCAGCTGTGTTAGGAATATAACTCCTACAAGTCCTTTTTTAGGAGATGAATATGCTATTTATGGTAGAGATGATGATAGAAAGAATCTCAAAGAGTTTTTGCTTTCAGAGGATGGTTGTGATAGTGGAAATAAAATAGGAGTGATTTCCATTGTGGGTATGGGAGGGTTAGGAAAAACAACACTAGCTAAACTCCTTTACCATGACCGTGATGTGAAGGAGAAGTTTGAAGTCAGAGGGTGGGCACATATTCCAAAAGATTTTGATGTTGTCACCATCACTAAAACCATTCTTAAATCTGTCATTTCAGAAACAATTACAGACACTGACTTAGTTAAACTCGAAGTTCAATTGCAGCAAAGTTTAAGTAACAAAAAGTTTTTGTTAGTACTGGATGATATATGGTATGGAAACTATGTTGGTTGGAATAGTCTAAGTGATATCTTTAATGTTGGACAAATAGGAAGTAAGATCATCATCACAACTCGAGATGTAAGAGTCGCACTACCCAAGCAAAAATCTCTCTATGTCCACCATTTAAGATCTTTAGAAACTGAAGATTCTTGGTCTTTATTAGCCAGACATGCATTTGTAGAGACAAACTACCAACAACATCCCAGTTTAGAAATAACTGGTAGAGAAATTTCCAAAAAATGTGGTGGCTTACCATTAGCTGCCGTAGCATTGGGGGGTATTCTTCGCACCAATTTGTCACAAGATCATTGGAATGATGTATTAAAAAATAGTATTTGGGAACATACAAATGATGAGGTGCAGCCAGCTCTGCTATTGAGTTATCGGTTTCTTCCAACTTCTTTAAAAGGATGCTTTGCTTATTGTTCAATTTTTCCAAAGAACTCAATCTTAGTGAAAAAGATGGTGGTTCAGTTGTGGATTGCAGAAGGCTTAGTACCTCGTCCTGAAATTGAGAATAGTTGGGAAAAAGTAGCAGAAAAATACTTTGATGAACTAGTGTCAAGGTCTCTGATACGTCAACGGTTCCTTGCTCACGAGGAAAACAACTTTGAAATGCATGATCTAATCAATGATTTAGCTATGGCAGTTTCATTTCCGTATTGTATTAGGTTAGACAAACATAAGCCAGATGAAAGGGTGCGACACTTGTCATACGACACAATAGAATATAACTCATACAATAAATTTGAAAAATTGCATGGACTAAATGGTCTACGAACCATTTTACCGATGCGGTTCCAAGCTTCACGGGTGTATGTCAATTTCGAGTCGTGGAAGTTATTTTTTGACTTGTTGTCAAAAATGACACACTTACACGTGTTGTCTCTTTCATACTATGAAAATATCATAGAGTTACCGAACTCTATTGGAAATTTAATTTACTTGCGATACTTGAATCTCTCCGGCACTCAAATTAAAAGGTTGCCTTCAGAAACATGCAAGCTTTACAATTTGCAGACGTTGTTGTTGTCATATTGCTATAAACTCATTGAATTGCCAAAAGACATGGGGAAATTGGTGAAACTACGCCACCTTGACATCAGAAACACTGGTCTGAAGAAAATGCCGACACAAATATCCAAATTAGAAAATCTACAAACATTGTCGGACTTTATTATGAGCAGCGTTAAGGATGTTGGATTGAAGATTGAAGATCTTGGAAAATTTTCCCATCTACGAGGAAGCCTTTCCATCTCACATCTTGAAAATGTAATTGACTCATCTCAAGCTTCTCAAGCAAACTTGGAGATGAAAAACGAAATTGACGAGTTGGAACTAGGATGGTCTTACACTGCTCCTTCAAACTCACAAATACAAGTACTCGAACGGCTGCGTCCGTCGACAAATTTGAAGAGTTTGACCATCTCTGGATTTGGTGGAGACAAATTATCAAATTGGATGGGAGATCCTTTATTTGTAAACATGGTGTGTTTGAAGATCACAGGGTGTAAAAAAACTTCAGTGCTGCCATCCCTCGGGCAACTAGGTAATCTAAAAGAAATATTTTTTAGTGAGATGGAATCTGTAAAGAGTGTTGGTACCGTGTTCTATGGAAGTGGTTCTTCTTCATTTCAACCATTTACCTCTTTAGAAACTCTAAGTTTTGAAGATATGCCAGAGTGGGAGGAATGGAAGTTAATTGGAGGTACATCTATAGAGTTTCCTAGTCTTATACGTTTGTTTCTAAACCGCTGTCCGAAACTGAAAGAAAACATACCTGGCAACCTTCCTAAGCTCGAAAGATTGTCACTTGAAAATTGTCCCAAACTTGAAGGGATGCCACCCAACAATCTTCCTTCTCTTGCAGTCCTGAGGTTAGAGGATTGTCCCTTATTGGTGGGGTCAAGACATTCTATTACAAACCCACCATCTGACGTATTCAGCCAATTGGTGATTTGTCTCAATTCTCTTCAAAAGTTGACCTTAGACAATATTCCATCTCTAACATCCTTTCCGATAGACGGTCTTCCCAAAACCTTACGATCTCTCTCTATCTTTTTCTGTAAGAATCTAGAGTTCTTTTCTCATGAATCTTTTCATAATTACTCATCACTCAAGGATTTGGATATATCCTGTAGTTGTAATTCAATGACATCATTTACCTTGGGCTCTCTCTCTGTCCTAAAAAATCTACGTATTTACAATTGTAAACATTTAAAATCCATATCAATAGCAGAAGATGCATCGGAACCAAATCTAGTGTTTCTTAGAAGCATCGAAATAGGGCAATGTGATGAACTGGAGTCAGTTTCTCTAAGTGGATTGCCATATCCTAAACTCACTGATTTAAGTTTATGGAACTGTGAGAATTTACGTTTTCTACCTGAATCAATAAAGACTCTAACTAGCCTTCAAAAAATGGAAATTCACGACCTTCCAAATCTGCAGCAATCGTTTTCCATAGATGATTTGCCTAACAATTTACGGGAACTGACGGTTGGCAGAGTTGGAGGGATTTTGTGGAATACAACTTGGGAACATCTCACTTCTCTCCCGGACTTGTATCTTTTGGGTGATGATATTGTGAAGGGGCTGATGAGAACGCAAGTTCCGTTTCTACCCACTAATCTTGTTTCCTTACAGATTTCTGAGCTTAAAGATATAGAATGCTTGGATGGGAAGTGGCTTCAAAATCTCACCTCTCTCCATAAACTTGAGATTGGTGAAGCCCCCAAGCTCAAGTCATTGCCAGAAAAGGGGGAATTGCCTTCCTCTCTTAAAGAACTGTATATAGATCATTGTTCGTTATTGGAAGCAAATTTGCAGAGGAAGAAAGGGAAAGAGTGGAGTAAGATTTCTCACATTCCCAAAATATATGTAAATCAGCAAATCATAAAATGA 3705 0.3779 MEMLVTKVVSGEFLDLFRRTKLDVELLEKLEITLLSLQSVLYDAEDKQITNPAVKKWLEMLQDAVFQADELFDEFNTEALRCKAEGGQVLNKFLSYFKRFNKKINSKLQKLFGRLEHLRNQNLGLKEGVSSCVRNITPTSPFLGDEYAIYGRDDDRKNLKEFLLSEDGCDSGNKIGVISIVGMGGLGKTTLAKLLYHDRDVKEKFEVRGWAHIPKDFDVVTITKTILKSVISETITDTDLVKLEVQLQQSLSNKKFLLVLDDIWYGNYVGWNSLSDIFNVGQIGSKIIITTRDVRVALPKQKSLYVHHLRSLETEDSWSLLARHAFVETNYQQHPSLEITGREISKKCGGLPLAAVALGGILRTNLSQDHWNDVLKNSIWEHTNDEVQPALLLSYRFLPTSLKGCFAYCSIFPKNSILVKKMVVQLWIAEGLVPRPEIENSWEKVAEKYFDELVSRSLIRQRFLAHEENNFEMHDLINDLAMAVSFPYCIRLDKHKPDERVRHLSYDTIEYNSYNKFEKLHGLNGLRTILPMRFQASRVYVNFESWKLFFDLLSKMTHLHVLSLSYYENIIELPNSIGNLIYLRYLNLSGTQIKRLPSETCKLYNLQTLLLSYCYKLIELPKDMGKLVKLRHLDIRNTGLKKMPTQISKLENLQTLSDFIMSSVKDVGLKIEDLGKFSHLRGSLSISHLENVIDSSQASQANLEMKNEIDELELGWSYTAPSNSQIQVLERLRPSTNLKSLTISGFGGDKLSNWMGDPLFVNMVCLKITGCKKTSVLPSLGQLGNLKEIFFSEMESVKSVGTVFYGSGSSSFQPFTSLETLSFEDMPEWEEWKLIGGTSIEFPSLIRLFLNRCPKLKENIPGNLPKLERLSLENCPKLEGMPPNNLPSLAVLRLEDCPLLVGSRHSITNPPSDVFSQLVICLNSLQKLTLDNIPSLTSFPIDGLPKTLRSLSIFFCKNLEFFSHESFHNYSSLKDLDISCSCNSMTSFTLGSLSVLKNLRIYNCKHLKSISIAEDASEPNLVFLRSIEIGQCDELESVSLSGLPYPKLTDLSLWNCENLRFLPESIKTLTSLQKMEIHDLPNLQQSFSIDDLPNNLRELTVGRVGGILWNTTWEHLTSLPDLYLLGDDIVKGLMRTQVPFLPTNLVSLQISELKDIECLDGKWLQNLTSLHKLEIGEAPKLKSLPEKGELPSSLKELYIDHCSLLEANLQRKKGKEWSKISHIPKIYVNQQIIK 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06955 1234 Gene3D Ribonuclease Inhibitor 537 913 IPR032675 -
Vivi3g06955 1234 Coils Coil 101 121 - -
Vivi3g06955 1234 SUPERFAMILY L domain-like 473 907 - -
Vivi3g06955 1234 Pfam Rx N-terminal domain 24 89 IPR041118 -
Vivi3g06955 1234 Pfam NB-ARC domain 174 377 IPR002182 GO:0043531
Vivi3g06955 1234 Gene3D Ribonuclease Inhibitor 921 1104 IPR032675 -
Vivi3g06955 1234 Gene3D - 311 393 IPR042197 -
Vivi3g06955 1234 FunFam Probable disease resistance protein At1g63360 395 483 - -
Vivi3g06955 1234 SUPERFAMILY L domain-like 921 1206 - -
Vivi3g06955 1234 Gene3D - 140 303 IPR027417 -
Vivi3g06955 1234 PRINTS Disease resistance protein signature 348 362 - -
Vivi3g06955 1234 PRINTS Disease resistance protein signature 250 264 - -
Vivi3g06955 1234 PRINTS Disease resistance protein signature 177 192 - -
Vivi3g06955 1234 PRINTS Disease resistance protein signature 862 878 - -
Vivi3g06955 1234 Coils Coil 27 47 - -
Vivi3g06955 1234 PANTHER DISEASE RESISTANCE PROTEIN RP 27 856 IPR044974 GO:0006952
Vivi3g06955 1234 Gene3D Ribonuclease Inhibitor 1107 1224 IPR032675 -
Vivi3g06955 1234 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 409 IPR027417 -
Vivi3g06955 1234 Gene3D - 394 483 IPR036388 -
Vivi3g06955 1234 Gene3D - 6 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06955 Vivi-Chr3 197852664 197864006 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06955 570 656 WRKY Transcription Factor Family AT4G12020 39.773 5.10e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06955 - - vvo:131593262 1996.48