Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06953 ATGGCGACTATTGTTGGAGGAGCACTTCTTTCAGCTTCCATGGAGATGTTGGTGACAAAGGTTGTTTCTGGTGAGTTTCTTGATTTGTTTCGGAGGACTAAGCTTGACGTTGAGCTGTTGGAAAAGCTGGAGATAACACTGCTGAGTCTTCAATCTGTACTTTATGATGCTGAGGACAAACAGATCACTAACCCTGCTGTCAAGAAGTGGCTGGAGATGTTGCAAGATGCCGTCTTTCAAGCTGACGAACTGTTCGACGAATTCAACACTGAAGCTTTAAGGTGCAAAGCTGAAGGTGGTCAGGTTCTTAATAAGTTTTTGTCTTATTTTAAGAGGTTTAATAAAAAGATCAATTCTAAACTACAAAAATTATTTGGAAGATTAGAACATTTGAGAAACCAAAATCTTGGATTGAAAGAAGGTGTTTCCAGCTGTGTTAGGAATATAACTCCTACAAGTCCTTTTTTAGGAGATGAATATGCTATTTATGGTAGAGATGATGATAGAAAGAATCTCAAAGAGTTTTTGCTTTCAGAGGATGGTTGTGATAGTGGAAATAAAATAGGAGTGATTTCCATTGTGGGTATGGGAGGGTTAGGAAAAACAACACTAGCTAAACTCCTTTACCATGACCGTGATGTGAAGGAGAAGTTTGAAGTCAGAGGGTGGGCACATATTCCAAAAGATTTTGATGTTGTCACCATCACTAAAACCATTCTTAAATCTGTCATTTCAGAAACAATTACAGACACTGACTTAGTTAAACTCGAAGTTCAATTGCAGCAAAGTTTAAGTAACAAAAAGTTTTTGTTAGTACTGGATGATATATGGTATGGAAACTATGTTGGTTGGAATAGTCTAAGTGATATCTTTAATGTTGGACAAATAGGAAGTAAGATCATCATCACAACTCGAGATGTAAGAGTCGCACTACCCAAGCAAAAATCTCTCTATGTCCACCATTTAAGATCTTTAGAAACTGAAGATTCTTGGTCTTTATTAGCCAGACATGCATTTGTAGAGACAAACTACCAACAACATCCCAGTTTAGAAATAACTGGTAGAGAAATTTCCAAAAAATGTGGTGGCTTACCATTAGCTGCCGTAGCATTGGGGGGTATTCTTCGCACCAATTTGTCACAAGATCATTGGAATGATGTATTAAAAAATAGTATTTGGGAACATACAAATGATGAGGTGCAGCCAGCTCTGCTATTGAGTTATCGGTTTCTTCCAACTTCTTTAAAAGGATGCTTTGCTTATTGTTCAATTTTTCCAAAGAACTCAATCTTAGTGAAAAAGATGGTGGTTCAGTTGTGGATTGCAGAAGGCTTAGTACCTCGTCCTGAAATTGAGAATAGTTGGGAAAAAGTAGCAGAAAAATACTTTGATGAACTAGTGTCAAGGTCTCTGATACGTCAACGGTTCCTTGCTCACGAGGAAAACAACTTTGAAATGCATGATCTAATCAATGATTTAGCTATGGCAGTTTCATTTCCGTATTGTATTAGGTTAGACAAACATAAGCCAGATGAAAGGGTGCGACACTTGTCATACGACACAATAGAATATAACTCATACAATAAATTTGAAAAATTGCATGGACTAAATGGTCTACGAACCATTTTACCGATGCGGTTCCAAGCTTCACGGGTGTATGTCAATTTCGAGTCGTGGAAGTTATTTTTTGACTTGTTGTCAAAAATGACACACTTACACGTGTTGTCTCTTTCATACTATGAAAATATCATAGAGTTACCGAACTCTATTGGAAATTTAATTTACTTGCGATACTTGAATCTCTCCGGCACTCAAATTAAAAGGTTGCCTTCAGAAACATGCAAGCTTTACAATTTGCAGACGTTGTTGTTGTCATATTGCTATAAACTCATTGAATTGCCAAAAGACATGGGGAAATTGGTGAAACTACGCCACCTTGACATCAGAAACACTGGTCTGAAGAAAATGCCGACACAAATATCCAAATTAGAAAATCTACAAACATTGTCGGACTTTATTATGAGCAGCGTTAAGGATGTTGGATTGAAGATTGAAGATCTTGGAAAATTTTCCCATCTACGAGGAAGCCTTTCCATCTCACATCTTGAAAATGTAATTGACTCATCTCAAGCTTCTCAAGCAAACTTGGAGATGAAAAACGAAATTGACGAGTTGGAACTAGGATGGTCTTACACTGCTCCTTCAAACTCACAAATACAAGTACTCGAACGGCTGCGTCCGTCGACAAATTTGAAGAGTTTGACCATCTCTGGATTTGGTGGAGACAAATTATCAAATTGGATGGGAGATCCTTTATTTGTAAACATGGTGTGTTTGAAGATCACAGGGTGTAAAAAAACTTCAGTGCTGCCATCCCTCGGGCAACTAGGTAATCTAAAAGAAATATTTTTTAGTGAGATGGAATCTGTAAAGAGTGTTGGTACCGTGTTCTATGGAAGTGGTTCTTCTTCATTTCAACCATTTACCTCTTTAGAAACTCTAAGTTTTGAAGATATGCCAGAGTGGGAGGAATGGAAGTTAATTGGAGGTACATCTATAGAGTTTCCTAGTCTTATACGTTTGTTTCTAAACCGCTGTCCGAAACTGAAAGAAAACATACCTGGCAACCTTCCTAAGCTCGAAAGATTGTCACTTGAAAATTGTCCCAAACTTGAAGGGATGCCACCCAACAATCTTCCTTCTCTTGCAGTCCTGAGGTTAGAGGATTGTCCCTTATTGGTGGGGTCAAGACATTCTATTACAAACCCACCATCTGACGTATTCAGCCAATTGGTGATTTGTCTCAATTCTCTTCAAAAGTTGACCTTAGACAATATTCCATCTCTAACATCCTTTCCGATAGACGGTCTTCCCAAAACCTTACGATCTCTCTCTATCTTTTTCTGTAAGAATCTAGAGTTCTTTTCTCATGAATCTTTTCATAATTACTCATCACTCAAGGATTTGGATATATCCTGTAGTTGTAATTCAATGACATCATTTACCTTGGGCTCTCTCTCTGTCCTAAAAAATCTACGTATTTACAATTGTAAACATTTAAAATCCATATCAATAGCAGAAGATGCATCGGAACCAAATCTAGTGTTTCTTAGAAGCATCGAAATAGGGCAATGTGATGAACTGGAGTCAGTTTCTCTAAGTGGATTGCCATATCCTAAACTCACTGATTTAAGTTTATGGAACTGTGAGAATTTACGTTTTCTACCTGAATCAATAAAGACTCTAACTAGCCTTCAAAAAATGGAAATTCACGACCTTCCAAATCTGCAGCAATCGTTTTCCATAGATGATTTGCCTAACAATTTACGGGAACTGACGGTTGGCAGAGTTGGAGGGATTTTGTGGAATACAACTTGGGAACATCTCACTTCTCTCCCGGACTTGTATCTTTTGGGTGATGATATTGTGAAGGGGCTGATGAGAACGCAAGTTCCGTTTCTACCCACTAATCTTGTTTCCTTACAGATTTCTGAGCTTAAAGATATAGAATGCTTGGATGGGAAGTGGCTTCAAAATCTCACCTCTCTCCATAAACTTGAGATTGGTGAAGCCCCCAAGCTCAAGTCATTGCCAGAAAAGGGGGAATTGCCTTCCTCTCTTAAAGAACTGTATATAGATCATTGTTCGTTATTGGAAGCAAATTTGCAGAGGAAGAAAGGGAAAGAGTGGAGTAAGATTTCTCACATTCCCAAAATATATGTAAATCAGCAAATCATAAAATGA 3744 0.379 MATIVGGALLSASMEMLVTKVVSGEFLDLFRRTKLDVELLEKLEITLLSLQSVLYDAEDKQITNPAVKKWLEMLQDAVFQADELFDEFNTEALRCKAEGGQVLNKFLSYFKRFNKKINSKLQKLFGRLEHLRNQNLGLKEGVSSCVRNITPTSPFLGDEYAIYGRDDDRKNLKEFLLSEDGCDSGNKIGVISIVGMGGLGKTTLAKLLYHDRDVKEKFEVRGWAHIPKDFDVVTITKTILKSVISETITDTDLVKLEVQLQQSLSNKKFLLVLDDIWYGNYVGWNSLSDIFNVGQIGSKIIITTRDVRVALPKQKSLYVHHLRSLETEDSWSLLARHAFVETNYQQHPSLEITGREISKKCGGLPLAAVALGGILRTNLSQDHWNDVLKNSIWEHTNDEVQPALLLSYRFLPTSLKGCFAYCSIFPKNSILVKKMVVQLWIAEGLVPRPEIENSWEKVAEKYFDELVSRSLIRQRFLAHEENNFEMHDLINDLAMAVSFPYCIRLDKHKPDERVRHLSYDTIEYNSYNKFEKLHGLNGLRTILPMRFQASRVYVNFESWKLFFDLLSKMTHLHVLSLSYYENIIELPNSIGNLIYLRYLNLSGTQIKRLPSETCKLYNLQTLLLSYCYKLIELPKDMGKLVKLRHLDIRNTGLKKMPTQISKLENLQTLSDFIMSSVKDVGLKIEDLGKFSHLRGSLSISHLENVIDSSQASQANLEMKNEIDELELGWSYTAPSNSQIQVLERLRPSTNLKSLTISGFGGDKLSNWMGDPLFVNMVCLKITGCKKTSVLPSLGQLGNLKEIFFSEMESVKSVGTVFYGSGSSSFQPFTSLETLSFEDMPEWEEWKLIGGTSIEFPSLIRLFLNRCPKLKENIPGNLPKLERLSLENCPKLEGMPPNNLPSLAVLRLEDCPLLVGSRHSITNPPSDVFSQLVICLNSLQKLTLDNIPSLTSFPIDGLPKTLRSLSIFFCKNLEFFSHESFHNYSSLKDLDISCSCNSMTSFTLGSLSVLKNLRIYNCKHLKSISIAEDASEPNLVFLRSIEIGQCDELESVSLSGLPYPKLTDLSLWNCENLRFLPESIKTLTSLQKMEIHDLPNLQQSFSIDDLPNNLRELTVGRVGGILWNTTWEHLTSLPDLYLLGDDIVKGLMRTQVPFLPTNLVSLQISELKDIECLDGKWLQNLTSLHKLEIGEAPKLKSLPEKGELPSSLKELYIDHCSLLEANLQRKKGKEWSKISHIPKIYVNQQIIK 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06953 1247 Gene3D Ribonuclease Inhibitor 1120 1224 IPR032675 -
Vivi3g06953 1247 PRINTS Disease resistance protein signature 263 277 - -
Vivi3g06953 1247 PRINTS Disease resistance protein signature 875 891 - -
Vivi3g06953 1247 PRINTS Disease resistance protein signature 190 205 - -
Vivi3g06953 1247 PRINTS Disease resistance protein signature 361 375 - -
Vivi3g06953 1247 Gene3D - 407 496 IPR036388 -
Vivi3g06953 1247 Gene3D - 153 316 IPR027417 -
Vivi3g06953 1247 FunFam Probable disease resistance protein At1g63360 408 496 - -
Vivi3g06953 1247 Gene3D - 16 128 - -
Vivi3g06953 1247 Coils Coil 40 60 - -
Vivi3g06953 1247 SUPERFAMILY L domain-like 932 1219 - -
Vivi3g06953 1247 SUPERFAMILY L domain-like 486 920 - -
Vivi3g06953 1247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 422 IPR027417 -
Vivi3g06953 1247 Gene3D - 324 406 IPR042197 -
Vivi3g06953 1247 PANTHER DISEASE RESISTANCE PROTEIN RP 40 858 IPR044974 GO:0006952
Vivi3g06953 1247 Pfam NB-ARC domain 187 390 IPR002182 GO:0043531
Vivi3g06953 1247 Gene3D Ribonuclease Inhibitor 935 1118 IPR032675 -
Vivi3g06953 1247 Pfam Rx N-terminal domain 10 102 IPR041118 -
Vivi3g06953 1247 Coils Coil 114 134 - -
Vivi3g06953 1247 Gene3D Ribonuclease Inhibitor 550 925 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06953 Vivi-Chr3 197852664 197864006 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06953 583 669 WRKY Transcription Factor Family AT4G12020 39.773 4.75e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06953 - - vvo:131593262 2016.89