Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06911 ATGGCTGCAACTATGATAGGAAGTGCTTTCCTCTCTGCAACTGTTCAGACCTTAGTTCAGAAACTTGCTTCCAAAGAGTTTCTTGATTACATCACAAACACCAAGCTAGATCTCTCACTCTTGAAACAGATAAGACTAACACTTCTCACTCTTCAACCTCTCCTAGATGTTGCAGAGGAGAAGCAGATCAGCACTCCTTCTGTCAAAGACTGGCTTGATGGCTTGAAAGATGCTGTCTACGATGCTGAAGATCTTCTCAATCAAATTAGCTATGATTCCCTTCGATGCAAGATGGAGAACACGCAAGCTGCAAGCAAAACTAAACAGGTGTGGAACTTACTTTCTTCTCCTTTTAAAAATATCTATGGAGAGATCAATTCCCAAATGAAAGATATGTGTGAAACCCTCAAACTTTTTGCTGATAATAAAGATATACTGAGTTTGCAAACTAAAAGTGTCAGAGTTTCTCATAGAACACCTTCATGTCCCATGTTCGACGAATCTTTCATGGTTGGTAGGGAAGATGATCTAGAGAAAGTAATGAACATGCTGCTATCAGAAAGCAGTACTAGCCAGAACAATATGGGCGTAGTTGCAATTGTAGGCATGGGAGGTGTCGGAAAAACAACACTTGCACAGCTTGCTTACAATGATGAAAATGTTCAAAAGCACTTCGATCTCACAGCATGGGCTTGTGTATCAGAAGATTTTGATGTTTTTAGAGTAACCAAAACTCTCCTTGAATCTGTCACTAAAACACCATGGGAAACTAATAATCTTGATTTACTTCGAGTTGAGTTAAGGAAAAATTTAAGGGATAGGAGATTTTTCATTGTGTTGGATGACTTATGGAATGACAGTTGTTCTGATTGGGATGAACTTGTATCTCCGTTGATTTATGGAAAAAATGGAAGCCGAGTGATCATCACAACACGCCACAAAAATGTGGCAGATGCTGCGCGCACATTTCCTATTTTTGAATTAGATCCTCTATCAGATGAAGACAGTTGGTCTTTACTCTCCAAACGTGCATTTGGAAGTGGAGACTTTTCTGAAACTCAACGCCGAAACCTAGAACCAATTGGCAGGAAGATTGCAAGAAAGTGTGGTGGATTGCCAATTGCTGCGAAATCACTTGGAGGACTGTTGCGTTCGAAAGTAGATACTGAAGAGTGGATTGAAGTTCTGAACAATGACATATGGAACTTAAAGAATGATAGTATTTTGCCTGCATTGCGCCTGAGTTATCAATATCTTTCCTCGCAACTAAAAAGATGTTTTTCCTATTGCTCAATTTTTCCAAAGGACTATTTACTTGATAGGGAGCAATTGGTTTTGTTGTGGATGGCAGAAGGCTTCCTTGATCATTCTCAAGATAAAAAAACTATGGAAGAAGTAGGTGATGAGTGTTTTACTGAATTGTTATCCAGATCATTGATACAACAATTGCATGATGACTCTAGTGGGCAGACTTTTATCTTGCATGACCTTGTTAATGATTTAGCTACTGTTGTATCTGGAAAAAGTTGTTACAGACTTGAATCAGGCGCTGAGAGCTATGAAAGTGTTCGACACTTTTCATATAATCAACAACTTTATGACATTTTCAAGAAGTTTAAGACTTTACACAAATTCAAATGCTTGAGAAGCTTCCTAGCCATTGACTATGATGAATTGGGAGAATATCATTTATCCAGAAAGGTGGTCGATGATTTTCTACCCACATTCGAAAGGTTGCGTGTGTTATCATTATCAAAATATGCAAACATCACCACACTACCGGACACAATTGGCAATTTAGTGCAGTTGCGCTATCTAGATCTTTCTCATTCTGAAATCACAAGCCTGCCTGACACCATATGCAACCTCTACTACTTGCAAACTTTGATTTTATCTATGTGCTCAAATCTCACAGAATTGCCAGAACATGTTGGAAAATTAATTCATTTGCGTCATCTATATCTTGATCAGACAAGCATAATAGAGATGCCAAAGCAAATTGCTGAACTAGAAAACCTTCAAACTCTAACTGTTTTTGTAGTAGGCAAGAAAAATATTGGTTTAAGTGTCAGAGAGCTTGGGAAGTTTCCTAAGCTACGAGGAAAATTATTCATCAAGAACTTACAAAATGTCAATGATGTCATGGAGGCAAGTGATGCAAACTTGAAGAGCAGAGAACATATTGAGGAGTTAACGCTTCAGTGGGGTGAGGAAGTTGATGACTCACTTAAAGGAAAAGATGTGCTTAATAAGTTACAACCATCACCAAACCTAAAGAAGCTGAGCATTGACTTATATGGCGGGACAAGTTTTCCAAGTTGGTTGGGAGATCCTTCATTTTCTAACATGGTGTCTCTCTGCCTTGATAACTGTGCGCATTGCCCGATACTTCCACCACTAGGGCAGCTACCTTCTCTCAAGGACTTGCAGATTACTAGAATGACATCTATTGTGACAATTGGGCAGGAGTTCTATGGCATGGCAGCAGGAAGTTCCAATTCTTCAATCCAACCATTTTCTTCCCTTGAGAAGCTTGTAATTGAGGAAATGTCAAATTGGGAGGAATGGCATCCTCTTCAAGACAACATATTTCCTTTTCCTCATTTGAAAACTCTGAGGTTATCAAGGTGTCCCAAATTGAAAGGACATTTACCTAGTCATCTTCCTTCCTTAGAAGAGATTGTAATATATCTTTGTGATCATCTCTTGGCAACACCACCTACTCAACATTGGCTCTCCTCAATAAAAAAGATTCATATTGTGGAAGATTCAGATTCAATAAGCAATACTGAAAGGACCCAATACTCATTGCTCGAGATTGATTCTCCATGTCTGCTGCAAACAATTAACATATCGAGCCGTCATATGCAAAAATCTGTACCTAAAATGATTATAAACAGCACCTGTCTTCGATTCTTGATTCTCTTTGGTATTAGTTCTCTCACTATGATTCCAACGAATGGCTTACCCACTTCTTTGCAATCACTTTCTATTATAAATTGTGAGAACTTAGCATTCTTTCCTCCTGAAATGTGGAGCAATTACACATCCCTTGTGACTCTTACATTAGAAGACTGCAAAGCACTTACCTCCGTCCCATTGAATTGTTTTCCTATGCTCCAAAATTTTTCCATCTATGATTGTAACAGTTTGGAATCTATTTTTATTTCAGAAACTTCTTCCTGTAGCTCTTCAACCCTCCAATATTTTCATGTCCGTGATTGCGAGGAACTTAGATCACTACCTCAACGGATGGGCACCCTCACCGCTCTTGAAAAGATATTTCTACGCAATCTTCCAAATTTGAATTTATCATTATGTGAAGGAGCTTTTCTACCTCCTAATTTACAATCAATTATGGTTGATTCTGTGATGATAACAAAGCCGGTAACAGAGTGGGGTCTCCAATGTCTCACTGCTCTTTCATCATTGGGTATCATAGGTGATGATACTGTTAACATATTGCTCAAAGAGCCGTTGTTGCCGATTTCCCTTGTGTCTCTAGACTTCGTTAATCTCTCTGAAATGAAGTCCTTAGAAGGAAATGGACTTCGACACCTCTCCTCTCTAGAAAGGCTTTGCTTTATTAATTGTCCAGAGCTTGTGTCATTGCCAGAAAAAACATTTCCCTCCTCGCTGAAAAAACTCTGCTTCGAGGATTGTCCAAAACTAGAGTCATTGCCAGAAGACAACCTCCCTACCTCTTTAGTGAGACTCTACATTGACAATTGCCCATTGTTAGAAGAAAGATATAAAAGGAAGGAACATTGGTCCAAAATTACTCACATCCCTGTCATAGATATGAATGGCCAAGTCACAATATGA 3825 0.3882 MAATMIGSAFLSATVQTLVQKLASKEFLDYITNTKLDLSLLKQIRLTLLTLQPLLDVAEEKQISTPSVKDWLDGLKDAVYDAEDLLNQISYDSLRCKMENTQAASKTKQVWNLLSSPFKNIYGEINSQMKDMCETLKLFADNKDILSLQTKSVRVSHRTPSCPMFDESFMVGREDDLEKVMNMLLSESSTSQNNMGVVAIVGMGGVGKTTLAQLAYNDENVQKHFDLTAWACVSEDFDVFRVTKTLLESVTKTPWETNNLDLLRVELRKNLRDRRFFIVLDDLWNDSCSDWDELVSPLIYGKNGSRVIITTRHKNVADAARTFPIFELDPLSDEDSWSLLSKRAFGSGDFSETQRRNLEPIGRKIARKCGGLPIAAKSLGGLLRSKVDTEEWIEVLNNDIWNLKNDSILPALRLSYQYLSSQLKRCFSYCSIFPKDYLLDREQLVLLWMAEGFLDHSQDKKTMEEVGDECFTELLSRSLIQQLHDDSSGQTFILHDLVNDLATVVSGKSCYRLESGAESYESVRHFSYNQQLYDIFKKFKTLHKFKCLRSFLAIDYDELGEYHLSRKVVDDFLPTFERLRVLSLSKYANITTLPDTIGNLVQLRYLDLSHSEITSLPDTICNLYYLQTLILSMCSNLTELPEHVGKLIHLRHLYLDQTSIIEMPKQIAELENLQTLTVFVVGKKNIGLSVRELGKFPKLRGKLFIKNLQNVNDVMEASDANLKSREHIEELTLQWGEEVDDSLKGKDVLNKLQPSPNLKKLSIDLYGGTSFPSWLGDPSFSNMVSLCLDNCAHCPILPPLGQLPSLKDLQITRMTSIVTIGQEFYGMAAGSSNSSIQPFSSLEKLVIEEMSNWEEWHPLQDNIFPFPHLKTLRLSRCPKLKGHLPSHLPSLEEIVIYLCDHLLATPPTQHWLSSIKKIHIVEDSDSISNTERTQYSLLEIDSPCLLQTINISSRHMQKSVPKMIINSTCLRFLILFGISSLTMIPTNGLPTSLQSLSIINCENLAFFPPEMWSNYTSLVTLTLEDCKALTSVPLNCFPMLQNFSIYDCNSLESIFISETSSCSSSTLQYFHVRDCEELRSLPQRMGTLTALEKIFLRNLPNLNLSLCEGAFLPPNLQSIMVDSVMITKPVTEWGLQCLTALSSLGIIGDDTVNILLKEPLLPISLVSLDFVNLSEMKSLEGNGLRHLSSLERLCFINCPELVSLPEKTFPSSLKKLCFEDCPKLESLPEDNLPTSLVRLYIDNCPLLEERYKRKEHWSKITHIPVIDMNGQVTI 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06911 1274 SUPERFAMILY L domain-like 940 1260 - -
Vivi3g06911 1274 Pfam NB-ARC domain 173 426 IPR002182 GO:0043531
Vivi3g06911 1274 Gene3D Ribonuclease Inhibitor 531 922 IPR032675 -
Vivi3g06911 1274 ProSiteProfiles Leucine-rich repeat profile. 602 623 IPR001611 GO:0005515
Vivi3g06911 1274 Gene3D Ribonuclease Inhibitor 925 1100 IPR032675 -
Vivi3g06911 1274 Pfam Rx N-terminal domain 10 102 IPR041118 -
Vivi3g06911 1274 Gene3D - 421 503 IPR036388 -
Vivi3g06911 1274 FunFam Probable disease resistance protein At1g63360 416 504 - -
Vivi3g06911 1274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 430 IPR027417 -
Vivi3g06911 1274 Gene3D Ribonuclease Inhibitor 1101 1260 IPR032675 -
Vivi3g06911 1274 PANTHER DISEASE RESISTANCE PROTEIN RP 64 872 IPR044974 GO:0006952
Vivi3g06911 1274 FunFam Probable disease resistance protein At1g61300 153 322 - -
Vivi3g06911 1274 Gene3D - 152 323 IPR027417 -
Vivi3g06911 1274 PRINTS Disease resistance protein signature 197 212 - -
Vivi3g06911 1274 PRINTS Disease resistance protein signature 598 614 - -
Vivi3g06911 1274 PRINTS Disease resistance protein signature 369 383 - -
Vivi3g06911 1274 PRINTS Disease resistance protein signature 270 284 - -
Vivi3g06911 1274 Gene3D - 330 420 IPR042197 -
Vivi3g06911 1274 SUPERFAMILY L domain-like 494 920 - -
Vivi3g06911 1274 Gene3D - 14 127 - -
Vivi3g06911 1274 SMART LRR_typ_2 647 670 IPR003591 -
Vivi3g06911 1274 SMART LRR_typ_2 600 623 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06911 Vivi-Chr3 196262119 196266213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06911 590 685 WRKY Transcription Factor Family AT4G12020 39.175 8.50e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06911 - - tpra:123915821 1441.79