Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06909 ATGGCTGCAACTATGATTGGAAGTGCTTTCCTCTCAGCAACTGTTCAAACCTTAGTTGAGAAACTTGCTTCTAAAGAGTTTCTTGATTACTTCAAAAACACCAAGCTCGATGACTCACTCTTGGAACAGTTAAGAGCACCACTACTCACTCTTAATGTTGTGCTAGATGCTGCAGAGGAGAAGCAGATCAACACTCCTTCTGTCAAAGACTGGCTTGACGGCTTGAAAGATGCTGTCTACGATGCTGAAGATCTGCTCAACCAAATCAGCTATGATTCCCTTCGATGCAAGATGGAGAACACGCAACCTGCAAGCAAAACTAAACAGGTCTGGAACTTCTTTTTTTCTCCTGCAAATAACTATGAAGAGATCAATTCCCAAATGAAAATAATATGCTTAAACTTGAAACATTTTGCTGAAAATAAAGATATCATTAGCTTGCAAACTAAAAGTGTCAGAGTTTCTCATAGAACACCTTCCAGTCCTATGTTCGATGAATCTGTCATGGTTGGTAGGAAAGATGGCCAAGAGAAAGTAACAAACATGTTGCTATCAGAAAGCAATACTAATATAGGCGTAGTTGCAATTCTAGGCATGGGAGGTGTCGGAAAAACAACACTTGCACAACTTGCTTGCAATGATGAAAATGTTCAAAAGCACTTTGATCTCACAGCATGGGCTTGTGTATCAGAAGATTTTGATGTTTTTAGAGTAACCAAAACTCTCCTTGAATCTGTCACTAAATCACCATGGGAAACCACTAATCTCGATTTACTTCGACTTGAGTTAAAGAAAAATTTGAGGGACAAAAGATTCTTCATTGTGTTGGATGACTTATGGAATGACAGTTGTTCTGATTGGGAAGATCTTGTATCTCAGTTGATTTATGGAAAAAATGGAAGCAGAGTGATCATCACCACACGCCACAAAAAAGTGGCAGATGCTGCACGCACATTTCCTATTTTTGAATTAGATCCTCTATCAGATGAAGACAATTGGTCTTTACTCTCCAAACGTGCATTTGGAAGTGGAGACTTTTCTGAAACTCAAAAGCGAAATGTAGAAGCAATAGGAAGGAAGATTGCAAGAAAGTGTGGTGGATTGCCAATTGCTGCGAAATCACTTGGAGGACTATTGCGTTCGAAAGTAGATCCTGAAGAGTGGATTGAAGTTCTGAACAACGACATATGGAACTTAAAGGATGATAATATTCTGCCTGCATTGCGCTTGAGTTATCAATATCTTTCCTCTCAATTGAAAAGATGTTTTTCCTATTGCTCTATTTTTCCAAAGGACTATCCACTTGATAGGAAGCAATTGGTTTTGTTGTGGATGGCAGAAGGCTTCCTTGATCATTCTCAAGACAAAAAAACCATGGAAGAAGTAGGTGATGAATGTTTTACTGAATTGTTATCCAGATCATTGATTCAACAATTGCATAATGATTCTAGTGGACAGAAATTTGTCCTGCATGACCTTGTTAATGATTTAGCTACGGTCGTATCTGAAAAATGTTGTTACAGACTTGAATTTGGTGCTAAGAGCTCTGAAACTGTTCGCCACTTGTCATATATTAAAAAAAGATATGACATTTTCAAGAAGTTTAAGACTTTTGACAAATTCAAACGCTTGAGAAGCTTCCTTGGCTTTGACCCTGGATGGGCATCAAATAATTTATCAAGAAAGGTGGTCGAAGATTTGCTACCCACATTTGGAAGGTTGCGTGTGTTATCGTTATCAAAATATAGAAACATCACCATGCTACCCATTACAATTGGCAATTTAGTGCAGTTGCGCTATCTAGATCTCTCTTACACGAATATCGCAAGCTTGCCTGGCACCATATGCAATCTCTATTACTTGCAAACCTTGATTTTATCTTGCTGCTCAAAACTCACAGAATTGCCTGAACATGTTGGAAAATTAAGTAATTTGCGTCATCTTTATATTGATAGGACAAGCATATCAGAGATGCCGAAGCAAATTGCTGAACTAGAAAACCTTCAAACTCTAACTCTTTTTGTAGTAGGCAAGAAACATATTGGTTTAAGTGTTAGAGAGCTTGGGAAGTTTCCTAAGCTACGGGGAAAGTTACTCATCAAGAACCTGCAAAATGTCAATGATGTCATGGAGGTAAGTGGTACCAACTTGAAGAGCAAAGAACATATTGAGGAATTGACGCTAGAGTGGGGCAAGGAAACTGATGACACACTTAATGAAAAAAATGTGCTTGATATGTTAGAACCATCTACAAAGCTAGAGAAACTGAGCATTGTATCATATGGTGGGACAAGTTTTCCCAGTTGGTTTGGCGATCCTTCTTTTTCTAACATGGTGTCCCTCAGCATTAGTAATTGTGAGAATTGCACGACACTTCCATCACTAGGGCAGCTACCTTCTCTCAAGGACTTGCAAATTAATAGAATGACAATTTTGGAGACAATTGGGCAGCAGTTCTATGGCATGGCAGCAGGAGGTTCCAGTTCTTCGTTCCAACCATTTCAAGCCCTTGAGAATTTGGAGTTTTTGTTCATGGAAAATTGGAAGGAATGGTGTCCTTTTCCAGACAACATGTTTCCTTTTCCTTGTCTGAAAACTCTGAAGTTATACAACTGTCCCAAATTGAAGGGACATTTACCTAGTCATCTTCCTTCCTTAGAAGAGATTGAAATATATAATTGTGATCATCTCTTGGCAACACCACCTACTCAACATTGGCTCTCCTCAATAAAAAAGATTCTTATTGTGAAAGATTCAGATTCAATAAGCAATACTGTAAGGAACCAATACTCATTGCTCGAGAGCGATTCTCCATGTCTGCTGCAAACAATACACATATGGAGCAGTCATATGCTAAAATCTGTACCTAAAATGATTTTAAACAGCACTTGTCTTCGAGAATTGGATCTCAATCATATTAGTTCTCTCACTACGATTCCAACAAATGGTTTACCCACTTCTTTGCAATCACTTCGTATTCAAAAATGTGAGAACTTAACATTCCTTCCTCCTGAAATGTGGAGCAATTACACATCCCTTGTGACTCTTAGATTAGACTACTGCAATTCAATTACCTCCGTCCCATTGAATTGTTTTCCTATGCTCCAAAATTTTTCCATCTATGATTGCAACAGTTTGGAATCTATTTTTATTTCAGAAACTTTGCCTTGTAGCTCGTCAGCCCTCAAATCTTTTCATGTCAATTCTTGCGAGGAACTTAGATCACTTCCTCAACAGATGGACACCCTCACCGCTCTTGAATCGTTATCTCTAACGAATCTTCCAAATCTGAATTTATCATTATGTGAAGGAGCTTTCCTACCTCCCAATTTACAATCAATTGGTGTTAAATCTGTGAGAGTAACAAAGCCAGTAGCAGAGTGGGGTCTCCAAGGCCTTACTTCCGTGTCATCAATGAAGATCGAAGGTGATGATATAGTGAACATATTGCTCAAAGAGCCGTTGTTGCCCATTTCCCTTGTGTGTCTAGAAATCAACGGTCTCTCTGAAATGAAATCCTCAGAAGGAATTGGACTTCGCCACCTCTCCTCTCTAGAAACCCTTTCTTTTAATGGTTGTCCGGGGCTTGTGTCATTGACAGAAAAAGCCTTTCCCTCTTCGCTGAAAACACTTAGTTTTTATGAGTGTACAAGACTAAAGTCATTGCCAGAAAAAGCCTTTCCCTCCTTGCTGAAAACACTTTCTTTACGCAATTGTCCAAGACTAGAGTCATTGCCAGAAAAAGCCTTTCCCTCCTCGCTGAAAACACTTGAGTTCAGCGATTGTCCAAGACTAGAGTCATTGCCAGAAGACAGTCTCCCTACCTCTTTGGAAGAACTGTTCATTGGAGGTTGCCCATTGTTAGAAGAAAGGTATAAAAGGAAGGAACATTGGTCCAAAATTGCTCACATCCCAGTCATACAAATAAATGACCAACTCACAATATGA 3948 0.3903 MAATMIGSAFLSATVQTLVEKLASKEFLDYFKNTKLDDSLLEQLRAPLLTLNVVLDAAEEKQINTPSVKDWLDGLKDAVYDAEDLLNQISYDSLRCKMENTQPASKTKQVWNFFFSPANNYEEINSQMKIICLNLKHFAENKDIISLQTKSVRVSHRTPSSPMFDESVMVGRKDGQEKVTNMLLSESNTNIGVVAILGMGGVGKTTLAQLACNDENVQKHFDLTAWACVSEDFDVFRVTKTLLESVTKSPWETTNLDLLRLELKKNLRDKRFFIVLDDLWNDSCSDWEDLVSQLIYGKNGSRVIITTRHKKVADAARTFPIFELDPLSDEDNWSLLSKRAFGSGDFSETQKRNVEAIGRKIARKCGGLPIAAKSLGGLLRSKVDPEEWIEVLNNDIWNLKDDNILPALRLSYQYLSSQLKRCFSYCSIFPKDYPLDRKQLVLLWMAEGFLDHSQDKKTMEEVGDECFTELLSRSLIQQLHNDSSGQKFVLHDLVNDLATVVSEKCCYRLEFGAKSSETVRHLSYIKKRYDIFKKFKTFDKFKRLRSFLGFDPGWASNNLSRKVVEDLLPTFGRLRVLSLSKYRNITMLPITIGNLVQLRYLDLSYTNIASLPGTICNLYYLQTLILSCCSKLTELPEHVGKLSNLRHLYIDRTSISEMPKQIAELENLQTLTLFVVGKKHIGLSVRELGKFPKLRGKLLIKNLQNVNDVMEVSGTNLKSKEHIEELTLEWGKETDDTLNEKNVLDMLEPSTKLEKLSIVSYGGTSFPSWFGDPSFSNMVSLSISNCENCTTLPSLGQLPSLKDLQINRMTILETIGQQFYGMAAGGSSSSFQPFQALENLEFLFMENWKEWCPFPDNMFPFPCLKTLKLYNCPKLKGHLPSHLPSLEEIEIYNCDHLLATPPTQHWLSSIKKILIVKDSDSISNTVRNQYSLLESDSPCLLQTIHIWSSHMLKSVPKMILNSTCLRELDLNHISSLTTIPTNGLPTSLQSLRIQKCENLTFLPPEMWSNYTSLVTLRLDYCNSITSVPLNCFPMLQNFSIYDCNSLESIFISETLPCSSSALKSFHVNSCEELRSLPQQMDTLTALESLSLTNLPNLNLSLCEGAFLPPNLQSIGVKSVRVTKPVAEWGLQGLTSVSSMKIEGDDIVNILLKEPLLPISLVCLEINGLSEMKSSEGIGLRHLSSLETLSFNGCPGLVSLTEKAFPSSLKTLSFYECTRLKSLPEKAFPSLLKTLSLRNCPRLESLPEKAFPSSLKTLEFSDCPRLESLPEDSLPTSLEELFIGGCPLLEERYKRKEHWSKIAHIPVIQINDQLTI 1315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06909 1315 Gene3D Ribonuclease Inhibitor 938 1110 IPR032675 -
Vivi3g06909 1315 Gene3D Ribonuclease Inhibitor 1111 1305 IPR032675 -
Vivi3g06909 1315 PRINTS Disease resistance protein signature 266 280 - -
Vivi3g06909 1315 PRINTS Disease resistance protein signature 593 609 - -
Vivi3g06909 1315 PRINTS Disease resistance protein signature 365 379 - -
Vivi3g06909 1315 PRINTS Disease resistance protein signature 193 208 - -
Vivi3g06909 1315 SUPERFAMILY L domain-like 490 915 - -
Vivi3g06909 1315 Gene3D Ribonuclease Inhibitor 538 916 IPR032675 -
Vivi3g06909 1315 Pfam NB-ARC domain 175 394 IPR002182 GO:0043531
Vivi3g06909 1315 Gene3D - 151 319 IPR027417 -
Vivi3g06909 1315 Gene3D - 326 416 IPR042197 -
Vivi3g06909 1315 FunFam Probable disease resistance protein At1g63360 412 500 - -
Vivi3g06909 1315 Pfam Rx N-terminal domain 10 105 IPR041118 -
Vivi3g06909 1315 SMART LRR_typ_2 595 618 IPR003591 -
Vivi3g06909 1315 SMART LRR_typ_2 1227 1252 IPR003591 -
Vivi3g06909 1315 SMART LRR_typ_2 642 665 IPR003591 -
Vivi3g06909 1315 Gene3D - 14 130 - -
Vivi3g06909 1315 PANTHER DISEASE RESISTANCE PROTEIN RP 67 895 IPR044974 GO:0006952
Vivi3g06909 1315 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 426 IPR027417 -
Vivi3g06909 1315 Gene3D - 417 499 IPR036388 -
Vivi3g06909 1315 FunFam Probable disease resistance protein At1g61300 152 318 - -
Vivi3g06909 1315 SUPERFAMILY L domain-like 939 1286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06909 Vivi-Chr3 196210611 196217906 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06909 183 498 WRKY Transcription Factor Family AT5G45050 23.765 1.67e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06909 - - tpra:123915821 1521.91