Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06906 ATGGCTGCAATAGGAACTGCTTTCCTCTCTGCATCTATTCAAACCTTAATTCAAACCTTAGCTGACAAACTTGTTTCCAAAGAGTTTCTTGATTACATAAAAAGCACCAAGCTCGATGTCTCACTCTTGAAACAGTTAAGGCTAACACTACTCACTCTTCAACCTGTGCTTGACGCTGCCGAGGAGAAGCAGATCAACACTCCTTCTGTCAAAGACTGGCTTGATGGCTTGAAAGATGCTATCTACGATGCTGAAGATCTGCTCAACCAGATTAGCTATGATTCCCTTCGATGCAAGATGGAGAACAAGCAACCTGCAAGCAAAACTAATCAGGTGTGGAACATCCTTTCTTCTCCTTTTAAAAATATCTATGGAGAGATCAATTCCCAAATGAAAGATATGTGTGAAACCCTCAAACTTTTTGCTGATAATAAAGATATACTCAGTTTGCAAACTAAAAGTGTCAGAGTTTCTCATAGAACACCTTCAAATCCTATGTTCGACGAGTCTGTCATGGTTGGTAGGAAAGATGACCAAAAGAAAGTAATCAACATGTTGCTATCAGAAAGCAATACTAATATGGGGGTAGTTGCATTTGTAGGCATGGGAGGTATTGGAAAAACAACACTTGCACAACGTGCTTACAATGATGAAAAAGTTCAAAAGCACTTTGATATCACAGCATGGGCATGTGTATCCGAGGATTTCGATATCCTTAGAGTAACCAAAACTCTCCTTGAATCTGTCACTAAAACACCATCACAAACCGACAATCTTGATTTACTTCGAGTTGACTTAAAGAAAAATTTAAAAGACAGGAGATTTTTGATTGTGTTAGATGACTTATGGAATGACACTCATCATGATTGGGAAGATCTTGTATCGCCGTTGATTTATGGAAAAAATGGAAGTAGAGTGATCATCACAACACGCCACAAAAAAGTGGCCGATGCTGCACGCACATTTCCTATTTTTGAATTAGATCCTCTATCAGATGAAGACAGTTGGTCTTTACTCTCCAAACATGCATTTGGAAGTGGAGACTTTTCTGAAGCTCAACAGCGAAACGTAGAAGCAATTGGAAGGAACATTGCAAGAAAGTGTGGTGGATTGCCAATTGCTTCGAAATCACTTGGAGGACTGTTGCGTTCAAAAGTAGATACTGAAGAGTGGATTGAAGTTCTGAACAACGACATATGGAACTTAAAGGATAATAATATTCTGCCTGCATTGCACCTGAGTTATCAATATCTTCCCTCTCAATTGAAAAGATGTTTTTCCTATTGTTCTATTTTCCCAAAGGACTATCCACTTGATAGGAAGCAATTGGTTTTGTTGTGGATGGCAGAAGGCTTCCTTGATAATTCCCAAGTCGACAAAACCATGGAAGAAGTAGGTGATGGGTGTTTTACTGAATTGTTATCCAGATCATTGATACAACAATTGCATGATGATTCTAGAGGACAGAAATTTGTCTTGCATGACCTTGTTAATGATTTAGCTACGGTCGTATCTAAAAAAAGTTGTTACAGACTTGAATTTGGCGCCAAGAGCTATGAAAATGTTCGCCACTTGTCATATAATAAAGAAAGATATGACATTTTCAAGAAGTTTAAGACTTTTGACAAATTCCAACGCTTGAGAAGCTTCCTTGCCATTCACTTGGGATGGCGACAATCTAGTTTATCAAGAAAGGTGGTCGAAGATTTGCTACCCACATTTGGAAGGTTGCGGGTGTTATTGTTATCAAGATATAAAAACATCACCACGCTACCCGTTACAATTGGCAATTTAGTGCAGTTGCGCTATCTAGATCTTTCTTTCACGAATATCGCAAGCTTGCCTGACACCATATGTAACCTCTACTACTTGCAAACGTTGATTTTATCTTGCTGCTCAGAACTCACAGAATTGCCTGAACATGTTGGAAAATTAATTAATTTGCGTCATCTTTATATTGATTATACAAGCATAATAGAGATGCCGAAGCAAATTGCTGAACTAGAAAACCTTCAAACTCTAACTGTTTTTGTAGTAGGCAAGAAAAATATTGGTTTAAGTGTTAGAGAGCTTGGGAAGTTTCCTAAGCTACGGGGAAAATTACTCATCAAGAACCTGCAAAATGTCAATGATGTCGTGGAGGTAAGTGATGCCAACTTGAAGAGCAAAGAACATATTAAGGAATTGACGCTGCAGTGGGGCAAGGAAACTGATGACACACTTAATGAAAAAAATGTGCTTGATATGTTAGAACCATCTACAAACCTAAAGAAACTGAGGATTATGTCATATGGTGGGACAAGTTTTCCAAGTTGGTTTGGAGATCCTTCGTTTTCTAACATGGTGTACCTCAGCATTGGTAATTGTGCGAATTGCATGACACTTCCACCACTAGGGCAGCTACATTCTCTTAAGGACTTGCAAATTGGTAGCTTGACAATTTTGGAGACAATTGGGCAGCAGTTCTATGGCATGGCAGCAGGAGGTTCACATTCTTCGTTCCAACCATTTCAATCCCTTGAGAATTTGGAATTTTCATGCATGGGAAATTGGAAGGAATGGTGTCCTTTTCCAGACAACATGTTTCCTTTTCCTCGTCTGAAAACTCTGAGGTTATCAAGGTGTCCCAAATTGAAAGGATATTTACCTAGTAATCTTCCTTCCTTAGAAGAGATTGAAATATATGATTGTGATCATCTCTTGGCAACACCACCTACTCAACATTGGCTCTCCTCAGTAAAAAAGATTCGTATTGTGGTAGATTCAGATTCAATAAGCAATACTGAAAGGACCCAATACTCATTGCTCGAGAGTGATTCTCCATGTCTTCTGCGAGACATAATCATATCGAGCCGTCATATGCTAAAATCTGTACCTAAAATGATTATAAACAGCCCCTCTCTTCGAAACTTGACTCTCAAAGGTATTAGTTCTCTTACTGCGATTCCAACAAATGGTTTACCCACTTCTTTGCAATCACTTCGTATTGAAAAATGTGAGAATTTGACATTCCTTCCTCCTGAAATGTGGAGCAATTACACATCCCTTGTGACTCTTACATTAGGCTACTGCAAAGCACTTACCTCCGTCCCATTGAATTGTTTTCCTATGCTCCAAAAATTTTCCATCTATGATTGCAACAATTTGGAGTCTATTTTTATTTCAGAAACTTTGCCATGTAGCTCGTCAGCCCTCCAATCTTTTTATGTCCGTGATTGCAAGGCACTTAGATCACTACCTCAAGGAATGAACACCCTCACCGCTCTTGAAGATCTATATCTCCGCAGTCTTCCAAATTTGAATTTATCATTATGTGAAGGAGTTTTCCTACCTCCCAATTTACAATCAATTGAGGTAGATTCTGTGAGGATAACAAAGCCAGTAACAGAGTGGGGTCTCCAAGGCCTTACTGCTCTTTCATCAATGACGATCGAAGGTGATGATATTGTGAACATGTTGCTCAAGGAGCAGTTGTTGCCCATTTCCCTTGTTTCTATAAGAATTGATGGTCTCTCTGAAATGAAATTCTTAGAAGGAAATGGACTTCGACACCTCTCCTCTCTAGAAGGGATTGGGTTTTCTGAATATTCAGGGCTCGTGTCATTTCCAGAAAAAGCCTTTCCCTCCTCGCTGAAAAAACTTTATTTCGGGAATTGTCCAAGACTAGAGTCATTTCCAGAAAAAGCCTTTCCCTCCTCGCTGAAAACACTTGAGTTCAGAAATTGTCCAAGAATAGAGTCATTTCCAGAAAAAGTCTTTCCCTCCTCGCTGAAAACACTTGAGTTCAGCGATTGTCCAAGACTAGAGTCATTGCCAGAAGACAGCCTCCCTACCTTTCTTGAGGATCTGACCATCAGAAGCTGCCCTTTGTTAGAAGAAAGGTATAAACAGAACGAACATTTGTCCAAAATTGCTCACATCCCAGTCATAAAAATAAATGACCAACTCATAATATGA 3957 0.3922 MAAIGTAFLSASIQTLIQTLADKLVSKEFLDYIKSTKLDVSLLKQLRLTLLTLQPVLDAAEEKQINTPSVKDWLDGLKDAIYDAEDLLNQISYDSLRCKMENKQPASKTNQVWNILSSPFKNIYGEINSQMKDMCETLKLFADNKDILSLQTKSVRVSHRTPSNPMFDESVMVGRKDDQKKVINMLLSESNTNMGVVAFVGMGGIGKTTLAQRAYNDEKVQKHFDITAWACVSEDFDILRVTKTLLESVTKTPSQTDNLDLLRVDLKKNLKDRRFLIVLDDLWNDTHHDWEDLVSPLIYGKNGSRVIITTRHKKVADAARTFPIFELDPLSDEDSWSLLSKHAFGSGDFSEAQQRNVEAIGRNIARKCGGLPIASKSLGGLLRSKVDTEEWIEVLNNDIWNLKDNNILPALHLSYQYLPSQLKRCFSYCSIFPKDYPLDRKQLVLLWMAEGFLDNSQVDKTMEEVGDGCFTELLSRSLIQQLHDDSRGQKFVLHDLVNDLATVVSKKSCYRLEFGAKSYENVRHLSYNKERYDIFKKFKTFDKFQRLRSFLAIHLGWRQSSLSRKVVEDLLPTFGRLRVLLLSRYKNITTLPVTIGNLVQLRYLDLSFTNIASLPDTICNLYYLQTLILSCCSELTELPEHVGKLINLRHLYIDYTSIIEMPKQIAELENLQTLTVFVVGKKNIGLSVRELGKFPKLRGKLLIKNLQNVNDVVEVSDANLKSKEHIKELTLQWGKETDDTLNEKNVLDMLEPSTNLKKLRIMSYGGTSFPSWFGDPSFSNMVYLSIGNCANCMTLPPLGQLHSLKDLQIGSLTILETIGQQFYGMAAGGSHSSFQPFQSLENLEFSCMGNWKEWCPFPDNMFPFPRLKTLRLSRCPKLKGYLPSNLPSLEEIEIYDCDHLLATPPTQHWLSSVKKIRIVVDSDSISNTERTQYSLLESDSPCLLRDIIISSRHMLKSVPKMIINSPSLRNLTLKGISSLTAIPTNGLPTSLQSLRIEKCENLTFLPPEMWSNYTSLVTLTLGYCKALTSVPLNCFPMLQKFSIYDCNNLESIFISETLPCSSSALQSFYVRDCKALRSLPQGMNTLTALEDLYLRSLPNLNLSLCEGVFLPPNLQSIEVDSVRITKPVTEWGLQGLTALSSMTIEGDDIVNMLLKEQLLPISLVSIRIDGLSEMKFLEGNGLRHLSSLEGIGFSEYSGLVSFPEKAFPSSLKKLYFGNCPRLESFPEKAFPSSLKTLEFRNCPRIESFPEKVFPSSLKTLEFSDCPRLESLPEDSLPTFLEDLTIRSCPLLEERYKQNEHLSKIAHIPVIKINDQLII 1318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06906 1318 SUPERFAMILY L domain-like 943 1298 - -
Vivi3g06906 1318 Gene3D - 414 503 IPR036388 -
Vivi3g06906 1318 Gene3D Ribonuclease Inhibitor 943 1107 IPR032675 -
Vivi3g06906 1318 Gene3D Ribonuclease Inhibitor 1112 1307 IPR032675 -
Vivi3g06906 1318 PRINTS Disease resistance protein signature 196 211 - -
Vivi3g06906 1318 PRINTS Disease resistance protein signature 269 283 - -
Vivi3g06906 1318 PRINTS Disease resistance protein signature 368 382 - -
Vivi3g06906 1318 PRINTS Disease resistance protein signature 862 878 - -
Vivi3g06906 1318 Pfam Rx N-terminal domain 13 104 IPR041118 -
Vivi3g06906 1318 SUPERFAMILY L domain-like 493 918 - -
Vivi3g06906 1318 FunFam Probable disease resistance protein At1g61300 155 321 - -
Vivi3g06906 1318 Gene3D Ribonuclease Inhibitor 535 938 IPR032675 -
Vivi3g06906 1318 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 429 IPR027417 -
Vivi3g06906 1318 Gene3D - 329 413 IPR042197 -
Vivi3g06906 1318 PANTHER DISEASE RESISTANCE PROTEIN RP 57 898 IPR044974 GO:0006952
Vivi3g06906 1318 FunFam Probable disease resistance protein At1g63360 415 503 - -
Vivi3g06906 1318 Gene3D - 153 322 IPR027417 -
Vivi3g06906 1318 Gene3D - 12 132 - -
Vivi3g06906 1318 Pfam NB-ARC domain 176 397 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06906 Vivi-Chr3 196186577 196192128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06906 588 683 WRKY Transcription Factor Family AT4G12020 37.113 1.99e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06906 - - tpra:123915821 1516.9