Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06903 ATGAAAGAAAATATGGATGATGGAAATTCCGAGGTTTCTGATAAACTTTCAGATAATAATCTATTTTCAACTCCCGAATCTATGAAAACAGATACTGAATTACCTAAGAGCACTACCAAAACATGCACTCATACTCACACATGTAATCCACCCGGTTTCGATTATGATGATTCTATTCATACGCACACATGTTTTCACACGCACACTCATGTTTTTGCTTCCGAAGACAACACAAATTCAAGGCCGAAATGGACTTCTTGTAATAGAGACGCTGTTAAGAAGTATAGGGAGAAGAAGAAGGCGCAGACGGCTTATTTGGAGGAAGAAGTTAAGAAGTTGAAACTTATTAATCAACAACTTATGAGGAGATTACAAGGGCAGGCGGTACTTGAAGCTGAATTGTTAAGGTTGAGGAACACTTTGGTTCAACTTAAGGGAAAAGTTGACTGTGAATTAGGTTCTTTCCCTTTTCAAAAGAAGTGTTTCTCTTCTAGTGTTTATAAAGGGAATGCTAATTTGGTTTCGGCTTCTCAGGGAATTGATCTTGAGTTATGTAGCAACGATACTTCAGATTGA 576 0.375 MKENMDDGNSEVSDKLSDNNLFSTPESMKTDTELPKSTTKTCTHTHTCNPPGFDYDDSIHTHTCFHTHTHVFASEDNTNSRPKWTSCNRDAVKKYREKKKAQTAYLEEEVKKLKLINQQLMRRLQGQAVLEAELLRLRNTLVQLKGKVDCELGSFPFQKKCFSSSVYKGNANLVSASQGIDLELCSNDTSD 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06903 191 Coils Coil 127 147 - -
Vivi3g06903 191 MobiDBLite consensus disorder prediction 14 43 - -
Vivi3g06903 191 Gene3D - 85 151 - -
Vivi3g06903 191 MobiDBLite consensus disorder prediction 1 43 - -
Vivi3g06903 191 CDD bZIP 88 125 - -
Vivi3g06903 191 Pfam Basic region leucine zipper 88 132 IPR004827 GO:0003700|GO:0006355
Vivi3g06903 191 SUPERFAMILY Leucine zipper domain 88 142 IPR046347 GO:0003700|GO:0006355
Vivi3g06903 191 PANTHER CCAAT/ENHANCER BINDING PROTEIN 26 156 IPR031106 GO:0003700|GO:0006351
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06903 38 176 bZIP Transcription Factor Family AT3G51960 49.660 3.16e-45 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi3g06903 bZIP_2 8.9e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06903 K25785 - gmx:100527780 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g06903 3 196138972 196141599 Vivi3g06903 3 196138972 196141599 ECH