Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06898 ATGGCTGCAATAGGAAGTGCTTTCCTCTCTGCAACTGTCCAGACCTTAGTTGAGAAACTTGCTTCCAAAGAGTTTCTTGATTACATCACAAACACTAAGCTTGACCTCTCACTCTTGAAACAGTTAAGGACAACACTACGCACTCTTCAACCTGTGCTTGACGCTGCGGAGGAGAAGCAGATCAACACTCCTTCAGTCAAAGAATGGCTTGATGACTTGAAAGATGCTGTCTACGATGCTGAAGATCTGCTCAACCAAATTAGCTATGATTCCCTTCGATGCAAGATGGAGAACGCGCAACCTGCAAGCAAAACTAATCAGGTGTGGAACTTCCTTTCTTCTCCTTTTAAAAATATCTATGGAGAGATCAATTCCCAAATGAAAGATATGTGTGAAACCCTCAAACTTTTTGCTGATAATAAAGATATCCTTAGTTTGCAAACTAAAAGTGTCAGAGTTTCTCATAGAACACCTTCCAGTCCTATGTTCAATGAATCTGTCATGGTTGGTAGGAAAGATGAGCAAGAGAAAGTAATGAACATGTTGCTATCAGAAAGCAATACTAATATGGGGGTAGTTGCAATTGTAGGCATGGGAGGTATTGGAAAAACAACACTTGCACAACGTGCTTACAATGATGAAGAAGTTCAAAAGCACTTTGATGTCACAGCATGGGCGTGTGTATCTGAGGATTTCGATATCCTTAGAGTAACCAAAACTCTCCTTGAATCTGTCACTAAAACACCATCAGGAACCGACAATCTTGATTTACTTCGAGTTGGCTTAAAGGAAAATTTAAAAGACAGGAGATTTTTGATTGTGTTGGATGACTTATGGAATGACACTCATCATGATTGGGAAGATCTTGTATCGCCGTTGATTTATGGAAAAAATGGAAGCAGAGTGATCATCACAACACGTCACGAAAAAGTGGCCGATGCTGCACGCACATTTCCTATTTTTGAACTAGATCCTCTATCAGATGAAGACAGTTGGTCTTTACTCTCCAAACATGCATTTGGAAGTGGAGACTTTTCTGAAGCTCAACAGCGAAACGTAGAAACAATTGGAAGGAAGATTGCAAGAAAGTGTGGTGGATTGCCAATTGCTGCGAAATCGCTTGGAGGACTGTTGCGTTCAAAAGTAGATACCGAAGAGTGGATTGAAGTTCTGAACAACGACATATGGAACTTAAAGGATAATAATATTCTTCCTGCATTGCGCCTGAGTTATCAATATCTTTCCTCTCAATTGAAAAGATGTTTTTCCTATTGCTCTATTTTTCCAAAGGACTATCCACTTGATAGGAAGCAATTGGTTTTGTTGTGGATGGCAGAAGGCTTCCTTGATAATTCCCAAGTCGACAAAACCATGGAAGAAGTGGGTGATGGGTGTTTTACTGAATTGTTATCCAGATCATTGATACAACAATTGCATGATGATTCTAGAGGACAGAAATTTGTCTTGCATGACCTTGTTAATGATTTAGCTACGGTCGTATCTGAAAAAAGTTGTTACAGACTTGAATTTGGCGCCAAGAGCTATGAAAATGTTCGACACTTGTCATATAATAAAGAAAGATATGACATTTTCAAGAAGTTTAAGACTTTTGACAAATTCAAACGCTTGAGAAGCTTCTTTGGCATCAACCCTCAATGGACATCAAATAATTTATCAAGAAAGGTGGTCGAAGATTTGCTACCCACATTTGGAAGGTTGCGTGTGTTATCGTTATCAAGATATAGCAACATCACCATGCTACCTGTTACAATTGGCAATTTAGTGCAGTTGCGCTATCTAGATCTCTCTTACACTTATATCGCAAGCTTGCCTGGCACCATATGCAATCTCTACTACTTGCAAACCTTGATTTTATCTTGCTGCTCAAAACTCACAGAATTGCCTGAACATGTTGGAAAATTAAGTAATTTGCGTCATCTTTATATTGATAGGACAAGCATAACAGAGATGCCGAAGCAAATTGCTGAACTTGAAAACCTTCAAACTCTAACTGTTTTTGTAGTAGGCAAGAAAAATATTGGTTTAAGTGTTAGAGAGCTTGGGAAGTTTCCTAAGCTACGGGGAAAATTACTCATCAAGAACCTGCAAAATGTCAATGATGTCATGGAGGTAAGTGGTACTAACTTGAAGAGCAAAGAACATATTGAGGAATTGACGCTAGAGTGGGGCAAGGAAACTGATGACACACTTAATGAAAAAAATGTGCTTGATATGTTAGAACCATCTACAAACCTAGAAAAACTGAGCATAGGATCATATGGTGGGACAAGTTTTCCAAGTTGGTTTGGAGATCCTTCGTTTTCTAACATGGTGTCTCTCAACATTAGTACTTGTGTGAATTGCATGACACTTCCATCACTAGGGCAGCTACCTTCTCTCAAGGACTTGCAGATTATTAGAATGACATCTATTGTGGCAATTGGGCAAGAGTTCTATGGCATGGCAGCAGGAGGTTCCAATTCTTCGTTCCAACCATTTCAATCCCTCGAGAATTTGGGATTTTATTACATGGGAAATTGGAAAGAATGGTGTCCTTTTCCAGACAACATGTTTCCTTTTCCTCGTCTGAAAACTCTGATGTTAGTAAGTTGTCCCGAATTGAAAGGACATTTACCTAGTCATCTTCCTTCCTTAGAAGAGATTACAGTACATACTTGTGATCATCTCTTGGCAACACCACCTACTCCACATTGGCTCTCCTCAGTAAAAAAGATTCGTATTATGGTAGATTCAGATTCAATAAGCAATACTGAAAGGACCCAATACTCATTGCTCGAGAGTGATTCTCCTTGTCTACTGGAAACAATAGACATATCGGGCCGTCATATGCTAAAATCTGTACCTAAAATGATTATAAGCAGCACCTGTCTTCGAGAATTGGATCTCAATGGTATTAGTTCTCTCACTACGATTCCAACAAATATTTTACCCACTTCTTTGCAATCACTTTGTATTCGAAATTGTGAGAACTTAACATTCCTTCCTCCTGAAATGTGGAGCAATTACACATCCCTTGTGACTCTTAGATTAGACTACTGCTATGCACTTACCTCCTTCCCACTGAATTGTTTTCCTGTGCTCCAAGAGTTTTCCATCCGAAGATGTAGTAGTTTGGAATCTATTTTTATTTCACAAACTTTGCCTTGTAGCTCGTCGGCCCTCCAATCTTTTTATGTCCGTGATTGCAAGGCACTTAGATCACTACCTCAACAGATGGACACCCTCACCGCTCTTGAACATATACATCTCCGCAATCTTCCAAATTTGGATTTATCATTATGTGAAGGAGCTTTCCTACCTCCCAATATACAATCAATTTTGGTATATTCTGTGAGGATAACAAAGCCGGTAACAGAGTGGGGTCTCCAATGTCTCACTGCTCTTTCATCATTGCATATCAAAGGTGATGATATTGTGAACATATTGATCAAAGAGCCGTTGTTGCCCATTTCCCTTGTGTCTCTATATATCCGTAATCTCTCTGAAATGAAATCCTTAGAAGGAAATGGACTTCGACACCTCTCCTCTCTACAAGTCCTTTACTTTTTTAATTGTTCAGGGCTTGTGTCTTTGCCAGAAAAAGCCTTTCCCTCCTTGCTGAAAACACTTGAGTTCAGCCGTTGTCCAAGACTAGAGTCACTGCCAGAGGACAACCTCCCTTCCTCTTTAGAGCATTTGTACATTAGAGATTGCCAATTGTTAGAAGAAAGGTATAAACGGAACGAACATTGGTCCAAACTTGCTCACATCCCAGTCATACAAATAAATGGCCAACTCATAATATGA 3807 0.3948 MAAIGSAFLSATVQTLVEKLASKEFLDYITNTKLDLSLLKQLRTTLRTLQPVLDAAEEKQINTPSVKEWLDDLKDAVYDAEDLLNQISYDSLRCKMENAQPASKTNQVWNFLSSPFKNIYGEINSQMKDMCETLKLFADNKDILSLQTKSVRVSHRTPSSPMFNESVMVGRKDEQEKVMNMLLSESNTNMGVVAIVGMGGIGKTTLAQRAYNDEEVQKHFDVTAWACVSEDFDILRVTKTLLESVTKTPSGTDNLDLLRVGLKENLKDRRFLIVLDDLWNDTHHDWEDLVSPLIYGKNGSRVIITTRHEKVADAARTFPIFELDPLSDEDSWSLLSKHAFGSGDFSEAQQRNVETIGRKIARKCGGLPIAAKSLGGLLRSKVDTEEWIEVLNNDIWNLKDNNILPALRLSYQYLSSQLKRCFSYCSIFPKDYPLDRKQLVLLWMAEGFLDNSQVDKTMEEVGDGCFTELLSRSLIQQLHDDSRGQKFVLHDLVNDLATVVSEKSCYRLEFGAKSYENVRHLSYNKERYDIFKKFKTFDKFKRLRSFFGINPQWTSNNLSRKVVEDLLPTFGRLRVLSLSRYSNITMLPVTIGNLVQLRYLDLSYTYIASLPGTICNLYYLQTLILSCCSKLTELPEHVGKLSNLRHLYIDRTSITEMPKQIAELENLQTLTVFVVGKKNIGLSVRELGKFPKLRGKLLIKNLQNVNDVMEVSGTNLKSKEHIEELTLEWGKETDDTLNEKNVLDMLEPSTNLEKLSIGSYGGTSFPSWFGDPSFSNMVSLNISTCVNCMTLPSLGQLPSLKDLQIIRMTSIVAIGQEFYGMAAGGSNSSFQPFQSLENLGFYYMGNWKEWCPFPDNMFPFPRLKTLMLVSCPELKGHLPSHLPSLEEITVHTCDHLLATPPTPHWLSSVKKIRIMVDSDSISNTERTQYSLLESDSPCLLETIDISGRHMLKSVPKMIISSTCLRELDLNGISSLTTIPTNILPTSLQSLCIRNCENLTFLPPEMWSNYTSLVTLRLDYCYALTSFPLNCFPVLQEFSIRRCSSLESIFISQTLPCSSSALQSFYVRDCKALRSLPQQMDTLTALEHIHLRNLPNLDLSLCEGAFLPPNIQSILVYSVRITKPVTEWGLQCLTALSSLHIKGDDIVNILIKEPLLPISLVSLYIRNLSEMKSLEGNGLRHLSSLQVLYFFNCSGLVSLPEKAFPSLLKTLEFSRCPRLESLPEDNLPSSLEHLYIRDCQLLEERYKRNEHWSKLAHIPVIQINGQLII 1268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06898 1268 Gene3D Ribonuclease Inhibitor 532 934 IPR032675 -
Vivi3g06898 1268 SUPERFAMILY L domain-like 933 1243 - -
Vivi3g06898 1268 Gene3D - 12 128 - -
Vivi3g06898 1268 PANTHER DISEASE RESISTANCE PROTEIN RP 41 878 IPR044974 GO:0006952
Vivi3g06898 1268 SMART LRR_typ_2 641 664 IPR003591 -
Vivi3g06898 1268 SMART LRR_typ_2 1181 1205 IPR003591 -
Vivi3g06898 1268 SMART LRR_typ_2 594 617 IPR003591 -
Vivi3g06898 1268 Gene3D - 149 318 IPR027417 -
Vivi3g06898 1268 Gene3D Ribonuclease Inhibitor 935 1111 IPR032675 -
Vivi3g06898 1268 Gene3D Ribonuclease Inhibitor 1112 1262 IPR032675 -
Vivi3g06898 1268 PRINTS Disease resistance protein signature 192 207 - -
Vivi3g06898 1268 PRINTS Disease resistance protein signature 265 279 - -
Vivi3g06898 1268 PRINTS Disease resistance protein signature 615 631 - -
Vivi3g06898 1268 PRINTS Disease resistance protein signature 364 378 - -
Vivi3g06898 1268 FunFam Probable disease resistance protein At1g61300 151 317 - -
Vivi3g06898 1268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 425 IPR027417 -
Vivi3g06898 1268 Gene3D - 416 498 IPR036388 -
Vivi3g06898 1268 SUPERFAMILY L domain-like 489 913 - -
Vivi3g06898 1268 FunFam Probable disease resistance protein At1g63360 411 499 - -
Vivi3g06898 1268 Gene3D - 325 415 IPR042197 -
Vivi3g06898 1268 Pfam NB-ARC domain 172 421 IPR002182 GO:0043531
Vivi3g06898 1268 Pfam Rx N-terminal domain 8 100 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06898 Vivi-Chr3 195889265 195895211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06898 584 679 WRKY Transcription Factor Family AT4G12020 38.144 7.70e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06898 - - tpra:123915821 1454.5