Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06895 ATGGTTGCAACTATGATTGGAAGTGCTTTCCTCTCTGCAACAGTTCAGACTTTAGTTGAGAAACTTGCTTCCAAAGAGTTTCGTGATTACATCACAAACACCAAGCTCAATGTCTCATTCTTAAAACAGTTAAGGCTAACACTACTCACTCTTCAACCTCTCCTAGATGCTGCGGAGGAGAAGCAGATCAACACTCCTTCTGTCAAAGACTGGCTTGATGGCTTGAAAGATGCTGTCTACGATGCTGAAGATCTGCTCAACCAAATCAGCTATGATTCCCTTCGATGCCAGATGGAGAACACGCAACCTGCAATCAAAACTAAGCAGGTCTGGAACTTCCTTTCTTCTCCTTTTAAAAATATCTATGGAGAGATCAATTCCCAAATGAAAGATATGTGTGAAATCCTCAAACTTTTTGCTGAAAATAAAGATATACTTAGTTTGCAAACTAAAAGTGTCAGAGTTTCTCATAGAACACCTTCAAATCCTATGTTCGATGAATCTGTCATGGTTGGTAGGAAAGATGACCAAGAGAAAGTAATGAACATGTTGCTATCAGAAAGCAATACTAATATGGGGGTAGTTGCAATTGTAGGCATGGGAGGTATTGGAAAAACAACACTTGCACAACGTGCTTACAATGATGAAGAAGTTCAAAAGCACTTTGATGTCACAGCATGGGCTTGTGTATCAGAAGATTTTGATGTTTTTAGAGTAACCAAAACTCTCCTTGAATCTGTCACTAAAATACCATGCGAAACCGACAATCTTGACTTACTTCGAGTTGAGTTAAAAAAAATTTTAAGTGACAAGAGGTTTTTCATTGTGTTAGATGACTTATGGAATGATAGCTATTCTGATTGGGGTGAACTTGTATCTCCGTTGATTTATGGAAAAAATGGAAGCAGAGTGATCATCACAACACGTCACAGAAAAGTGGCAGATGTTGCACGCACGTTTCCTATTTTTGAATTAAATCCTTTTTCAGATGAAGACAGTTGGTCTTTACTCTCCAAACATGCATTTGGAAGTGGAGACTTTTCTGAAACTAAACGCCGAGACCTAGAAGCAATTGGAAGGAAGATTGCAAGAAAGTGTGGTGGATTGCCAATTGCTGTGAAATCACTTGGGGGACTATTGCGTTCGAAAGTACATGCTGAAGAGTGGATTGAAGTTCTGAACAATGACATATGGAACTTACAGAATGATAATATTCTGCCTGCCTTGCGCCTGAGTTATCAATATCTTTCTTCTCAATTGAAAAGATGTTTTTCTTATTGCTCTATTTTTCCAAAGGACTATCCACTTGATAGGAAGAAATTGGTTTTGTTGTGGCTGGCAGAAGGCTTCCTTGATAATTCCCAAGTCGACAAAACCATGGAAGAAGTAGGTGATTGGTGTTTTACTGAATTGTTATCCAGATCATTGATTCAACAATTGCATGATGATTCTCGTCGGCAAACTTTTGTCTTGCATGACCTTGTTAATGATTTAGCTACTGCTGTATCTGGTAAAACTTGTTATAGATTTGAATATGGCACTAAGAGCTATGAAAATGTGCGCCACTTGTCATATAATCCAGAATTTTATGACATTTTCAAGAAGTTTAAGACTTTCTACAAATTCAAATGCTTAAGAAGCTTCCTAGCCATTGGCTCTGCTGGATGGCCAGGGAATTGTTTATCTAGGAAGGTGGTCGAAGATTTGCTACCCACATTTGGAAGTTTGCGTGTGTTATCATTATCAAAATATAGCAACATCACCACGCTTCCCGATACAATTGGGAATTTAGTGCAGTTGCGCTATCTAGATCTCTCTCAGTCTAAATTCACAAGCCTGCCTGACACCATTTGCAGCCTCTACTACTTGCAAACTTTGATTTTATCTATGTGCTCAAATCTCACAGAATTGCCAGAGCATGTTGGAAAATTAATTCATTTGCGTCATCTATATCTTGATGGGACAAGCATAATAGAGATGCCAAAGCAACTCGCGGAACTAGAAAACCTTCAAACTCTAACTGTTTTTATAGTAGGAAAGAAAAATATTGGTTTAAGTGTTAGAGAGCTTGGGAAGTTTCCTAAACTAAGGGGAAAATTGTTCATCCGAAACCTGCAAAATGTCAATGATGTCATGGAGGTAAGTGATACCAACTTGAAGAACAAAGAACATATTGAGGAATTGAAGCTACAGTGGGGCATGGAAACTAATGACACATTTAATGAAAAAAATGTGCTTGATATGTTAGAACCATCTACAAACCTAGAGAAACTAAGCATTGTATCATATGGCGGGACAAGTTTTCCAAGTTGGTTTGGAGATCCTTCGTTTTCTAACATGGTGTCCCTCCACATTATTAATTGTGAGAATTGCGTGACACTTCCACCACTAGGGCAGCTACCTTCTCTCAAGGACTTGAAGATTTTTGGAATGACAATTTTGGAGACAATTGGGCAGCAGTTCTATGGCATGGCAGCAGGAGGTTCCAATTCTTCGTTCCAACCATTTCAATCCCTTGAGAAGTTAGACTTTACGTGCATGAGAAGTTGGAAGGAGTGGTGTCCTTTTCCAGACAACATGTTTCCTTTTCCTCGTCTGAAAACTTTGAGGTTAGCATTGTGTCCCAAATTGAAAGGATATTTACCTAGTCATCTTCCTTCCTTAGAAGAGATTGAAATATATGGTTGTGATCATCTCTTGGCAACACCACCTACTCAACATTGGCTCTCCTCAATAAAAAAGATTCGTATTATTGTATATTCAGATTCAATAAGCAATACGGAAGGGACCCAATACTTGTTGCTCGAGAGTGATTCTCCATGTCTACTGCAAACAATAGACATATCGTGCCGTCATATGCTAAAATCTGTACCTAAAATGATTATAAACAGCACCTCTCTTCGAAACATGACTCTCAATGGTATTAGTTCTCTCACTACGATTCCAACAAATGGTTTACCCACTTCGTTGCAATCACTTCGTATTAATAAATGTGAGAATTTAACATTCTTTCCTCCTGAAATGTGGAGCAATTACACATCCCTTGTGACTCTTGATTTAGACGACTGCAATGCACTTACCTCCGTCCCATTGAATTGTTTTCCAATGCTCCAAAAGTTTTCCATCTCTGATTGCAAGAGTTTGGAATCTATTTTTATTTCAGAAACTTTGCCTAGTAGCTCGTCAGCCCTCAAATCTTTTGATGTCGGTTCTTGCGAGGAACTTAGAACACTACCTCAACGGATGGGCACCCTCACCGCTCTTGAAAGTATAAATCTTTTGGATCTTCCAAATTTGAATTTATCATTATGTGAAGGAGTTTTCCTACCTCCCAATTTACAATCAATTGTTGTTAAATCTGTGAGAGTAACAAAGCCAGTAGCAGAGTGGGGTCTCCAAGGCCTTACTTCTGTTTCATCATTGCATATCGGAGGTGATGATATTGTGAACATGATGCTCAAAGAGCCGTTGTTGCCCATTTCTCTTGTGTCTCTACAAATCAGTAATCTCTCTGAAATGAAATCCTTAGAAGGAAATGGACTTCGACACCTCTCTTCTCTAGAAACCCTTTATTTTGATGGCTGTCCAGGGCTTGTGTCATTGCCAGAAAAAACCTTTCCCTCCTCGCTGAACACACTTTATTTCTGCAATTGTCCAAAACTAGAGTCATTGCCAGAAAAAGCCTTTCCCTCCTTGCTGAAAACACTTCATTTCAGGAATTGTCCACGACTAGAGTCATTGCCAGAAGACAGCCTCCCTACGTCTTTTGAGCGGCTGATCATTGAAGATTGCCCATTGTTAGAAGAAAGATATAAAAGGAAGGAACATTGGTCCAAAATTGCTCACATCCCAGTCATAAAAATAAATGACCAACTCACAATATGA 3885 0.39 MVATMIGSAFLSATVQTLVEKLASKEFRDYITNTKLNVSFLKQLRLTLLTLQPLLDAAEEKQINTPSVKDWLDGLKDAVYDAEDLLNQISYDSLRCQMENTQPAIKTKQVWNFLSSPFKNIYGEINSQMKDMCEILKLFAENKDILSLQTKSVRVSHRTPSNPMFDESVMVGRKDDQEKVMNMLLSESNTNMGVVAIVGMGGIGKTTLAQRAYNDEEVQKHFDVTAWACVSEDFDVFRVTKTLLESVTKIPCETDNLDLLRVELKKILSDKRFFIVLDDLWNDSYSDWGELVSPLIYGKNGSRVIITTRHRKVADVARTFPIFELNPFSDEDSWSLLSKHAFGSGDFSETKRRDLEAIGRKIARKCGGLPIAVKSLGGLLRSKVHAEEWIEVLNNDIWNLQNDNILPALRLSYQYLSSQLKRCFSYCSIFPKDYPLDRKKLVLLWLAEGFLDNSQVDKTMEEVGDWCFTELLSRSLIQQLHDDSRRQTFVLHDLVNDLATAVSGKTCYRFEYGTKSYENVRHLSYNPEFYDIFKKFKTFYKFKCLRSFLAIGSAGWPGNCLSRKVVEDLLPTFGSLRVLSLSKYSNITTLPDTIGNLVQLRYLDLSQSKFTSLPDTICSLYYLQTLILSMCSNLTELPEHVGKLIHLRHLYLDGTSIIEMPKQLAELENLQTLTVFIVGKKNIGLSVRELGKFPKLRGKLFIRNLQNVNDVMEVSDTNLKNKEHIEELKLQWGMETNDTFNEKNVLDMLEPSTNLEKLSIVSYGGTSFPSWFGDPSFSNMVSLHIINCENCVTLPPLGQLPSLKDLKIFGMTILETIGQQFYGMAAGGSNSSFQPFQSLEKLDFTCMRSWKEWCPFPDNMFPFPRLKTLRLALCPKLKGYLPSHLPSLEEIEIYGCDHLLATPPTQHWLSSIKKIRIIVYSDSISNTEGTQYLLLESDSPCLLQTIDISCRHMLKSVPKMIINSTSLRNMTLNGISSLTTIPTNGLPTSLQSLRINKCENLTFFPPEMWSNYTSLVTLDLDDCNALTSVPLNCFPMLQKFSISDCKSLESIFISETLPSSSSALKSFDVGSCEELRTLPQRMGTLTALESINLLDLPNLNLSLCEGVFLPPNLQSIVVKSVRVTKPVAEWGLQGLTSVSSLHIGGDDIVNMMLKEPLLPISLVSLQISNLSEMKSLEGNGLRHLSSLETLYFDGCPGLVSLPEKTFPSSLNTLYFCNCPKLESLPEKAFPSLLKTLHFRNCPRLESLPEDSLPTSFERLIIEDCPLLEERYKRKEHWSKIAHIPVIKINDQLTI 1294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06895 1294 Gene3D - 418 501 IPR036388 -
Vivi3g06895 1294 SUPERFAMILY L domain-like 939 1269 - -
Vivi3g06895 1294 FunFam Probable disease resistance protein At1g63360 413 501 - -
Vivi3g06895 1294 Pfam Rx N-terminal domain 10 101 IPR041118 -
Vivi3g06895 1294 Gene3D Ribonuclease Inhibitor 556 927 IPR032675 -
Vivi3g06895 1294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 427 IPR027417 -
Vivi3g06895 1294 Gene3D - 328 417 IPR042197 -
Vivi3g06895 1294 FunFam Probable disease resistance protein At1g61300 153 319 - -
Vivi3g06895 1294 Gene3D - 14 131 - -
Vivi3g06895 1294 SUPERFAMILY L domain-like 491 921 - -
Vivi3g06895 1294 Gene3D - 151 320 IPR027417 -
Vivi3g06895 1294 Gene3D Ribonuclease Inhibitor 1055 1277 IPR032675 -
Vivi3g06895 1294 SMART LRR_typ_2 644 667 IPR003591 -
Vivi3g06895 1294 SMART LRR_typ_2 1184 1208 IPR003591 -
Vivi3g06895 1294 SMART LRR_typ_2 597 620 IPR003591 -
Vivi3g06895 1294 PANTHER DISEASE RESISTANCE PROTEIN RP 61 896 IPR044974 GO:0006952
Vivi3g06895 1294 Gene3D Ribonuclease Inhibitor 935 1054 IPR032675 -
Vivi3g06895 1294 PRINTS Disease resistance protein signature 267 281 - -
Vivi3g06895 1294 PRINTS Disease resistance protein signature 1010 1026 - -
Vivi3g06895 1294 PRINTS Disease resistance protein signature 194 209 - -
Vivi3g06895 1294 PRINTS Disease resistance protein signature 366 380 - -
Vivi3g06895 1294 Pfam NB-ARC domain 174 423 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06895 Vivi-Chr3 195834389 195839229 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06895 587 682 WRKY Transcription Factor Family AT4G12020 37.113 4.60e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06895 - - tpra:123915821 1464.51