Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06893 ATGGCTGCAACTATGATAGGAAGTGCTTTCCTCTCTGCAACTGTTCAGACCTTAGTTCAGAAACTTGCTTCCAAAGAGTTTCTTGATTACATCACAAACACCAAGCTAGATCTCTCACTCTTGAAACAGATAAGGCTAACACTTCTCACTCTTCAACCTCTCTTAGATGCTGCAGAGGAGAAGCAAATCAACATTCCTTCTGTCAAAGACTGGCTTGATGGCTTGAAAGATGCTGTTTACGATGCTGAAGATCTGCTCAACCAAATCAGCTATGATTCCCTTCGATGCCAGATGGAGAACACGCAACCTGCAATCAAAACTAAACAGGTGTGGAACTTCCTTTCTTCTCCTTTTAAAAATATCTATGGAGAGATCAATTCCCAAATGAAAGATATGTGTGAAACCCTGAAACTTTTTGCACAACATAAAGATATTGTTAGTTTGCAAATTAAAAGTGTCAGAGTTTCTCATAGGCGACCTTCAAGTTCTATGGTCAATGAATCTGTCATGGTTGGTAGAAAAGATGACAAAGAGATAATAATGAACATGTTGGTATCAGAAAATGGCACTAGAAAGAAAAATATAGAGGTTGTTGCAATTTTAGGTATGGGAGGTGTCGGAAAAACAACACTTGCACAACTTGCTTACAATGATGAAAAAGTTGAAGATCACTTTGATCTTAAAGCATGGGCTTGTGTATCGGAGGATTTTGATGTTTTTAGAGTAACCAAAACCCTCCTTGAATCTGTTACTTCAAAAACATGGGAAACCAATAATCTTGATTTTCTTCGAGTTGAGTTAAAGAGAAATTTGAGGGATAGGAGATTTTTCGTTGTGTTGGATGACTTATGGAATGACAGTTATATTGATTGGGATGAACTTGTATCTCCGTTGATTAGTGGAAAAACTGGAAGCAGAGTGATCATCACAACACGCCAAGAAAAAGTGGCAATTAATGCACACACATTTCCTATTCATAAATTAGATCCTCTATCGGATGAAGAAAGTTGGTCTTTACTCTCCAAACATGCATTTGGAGGCACAGAGTTTTGTGAAACTAAATGTCGAAACCTAGAAGCAATTGGCAGGAAGATTGCAAGAAGGTGTGGTGGATTGCCAATAGCTGCAAAAACACTTGGAGGTCTACTCCGTTCAAAATTAGATACTAAAGAATGGATTGAAGTTCTGAACAACGACATATGGAAGTTACAAAATGATAACATTGTGCCTGCATTGCTCCTGAGTTATCAATATCTTTCCTCTCAATTGAAAAGTTGTTTTTCTTATTGTTCTATTTTTCCAAAGGACTACCCACTTGATAGGAAGCAATTGGTTTTGTTATGGATGGCAGAAGGCTTCCTTGATCATTCCCAAGACGACAAAACCATGGAAGAAGTAGGTGATGAGTGTTTTACTGAGTTAATATCCAGATCATTGATTCAACAATTGCACAATGACTCTAGTGGGCAAACTTTTGTTTTGCATGACCTTGTTAATGATTTAGCTACGGCCGTATCTGGAAAAAGTTGTTATAGACTTGAATTTGGTGCTAAGAGCTATGAAAATGTGCGCTACTTGTCATATAATCAAGAAAGATGCGACACTTTCAAGAAGTTTAAGAATTTTTACCAATTCAAATGCTTGAGAAGCTTCATAGCCATTGACTTTAGGGGGTGGAAAGAATACTATTTATCAAGAAAGGTGGTTGATGATTTGCTACCCACATTTGCAAGGTTGCGCGTGTTATCGTTATCAAGATATGTAAACATTACCATGCTGCCGGATACAATTGACAACCTAGTGCAATTGCGCTATCTAGATCTCTCTCTCACTAATATCACAAGCTTGCCTGACACCATATGCAACCTCTACTACTTGCAAACCTTGATTTTATCTTGGTGCTCAAAACTCAAAGAATTGCCAGAACATATTGGAAAATTAATTAATTTGCGTCATCTTTATATTGATATGACAAGCATAATAGAGATGCCGAAGCAAATTGCTAAACTAGAAAACCTTCAAACTCTAACGGTTTTTGTTGTAGGCAAAAAAAATATTGGTTTAAGTGTCAAAGAGCTTGGGATGTTTCCTATGCTACGAGGAAAATTATTCATCAAAAACCTACAAAATGTCATTGATGTAATGGAGGCAAGTGATACCAATTTGAAGAGAAAAGAGCATATTGAGGAATTGACACTACAGTGGGGCGAGGAAGTTGATGACTCACTTAAAGTAAAAGAGGTGCTTAGTAAGTTACAACCATCACCAACTCTGAAGAAGCTTAGCATTGACTTATATGGTGGGACAAGTTTTCCAAGTTGGTTGGGAGATCCTTCATTTTCTAATATGGTGTCCCTTTGCATTGATAATTGTGTGAATTGCACGACACTTCCACCACTAGGGCAGCTACCTTCTCTTAAGGACTTGAAGATTGCTAGAATGACAATTTTGAAGACAATCGGGCAGGAGTTTTATGGCATGGTAGCAGGAGGTTCCAATTCTCCGTTCCAACCATTTTCTTCCCTTGAGAAGCTGGTAATTGAGGAAATGTCAAATTTGGAGGAATGGTATCCTTTTCAAGGCAGCATATTTCCTTTTCTCCGTCTTAAAAATCTGGAGTTATTTTACTGCCCTAAACTGAGGGGTCACCTGCCTAGTCAACTTCCTTCCATAGAAAAGATTGAAATGGATGGTTGTGATCATCTCTTGGCAACACCACCTACTCAACATTGGCTCTCCTCAATAAAAAAGATATATATTGTGGGAGATTCGAATTCAGAAAGCAATACTGAATGGACCGAATGCTCATTGCTTGGGAGTGATTGTCCATGTCTATTGCAAGAAATAGATATAACGAGCTGTCATATGATAAAATCTGTACCTAAAATGGTTATTAACAGCACCTGTCTTCAACAGTTGACTCTCCATGGTATTAGTTCTCTCACTGCGTTTCCAACAAATGGTTTACCCAGTTCTTTGCAATCACTTGATATTGGCGAGTGTGAGAATTTAACATTCCTACCTCCCGAAACATGGAGCAACTACACATCACTTGTATCTCTTCATTTAGACAATAGCTGCAATTCACTTACCTCATTCCCATTGAACTGTTTTCCTATGCTCCAAAATCTTTCCATCAGTAAATGTAGGAGTTTGGAATCTATTTTTATTTCAAAAACATCCTCTTGTAGCTTGTCAACCCTCAAATCATTTTATGTCAATGATTGTGAAACACTTAGATCGCTGCCTCAACGGATGGACACCCTTACCGCTCTTGAAAATATATTTCTCTGCAATCTTCCAAATTTGAATTTATCATTATGTGAAGGAGCTTTCCTACCTCCTAGTTTACAATCCATTGCTGTTGATTCTGTGAGAGTAACAAAGCCGGTAACAGAGTGGGGTCTCCATGGTCTTACTGCTCTTTCATTATTGTATATCAAAGGTGATGATATTGTTAACATGTTGCTCAAGGAGTCGTTGTTGCCTATTTCTCTTGTGAATCTAGAGATCACTAATCTCTCTGAAATGAAATTCTTAGAAGGAAATGGACTTCGACACCTCTCCTCTCTAGAAGGGCTTTACCTTTATCATTGTTCAGAGCTTGTGTCAGTATCAGAAAAAATCTTTCCCTCCTCGCTGAAAATACTCTATTTCGAGGATTGTCCAAAACTAGAGTCATTGCCAGAAGACAGCCTCCCTCCCTCTTTAGAGCATTTGTTCATTAGAGATTGTCCATTGTTAGAAGAAAGATATAAAAGGAAGGAACATTGGTCCAAAATTGCTCACATCCCAGTCATAAGAATAAATGACCAAGTCACAATATGA 3828 0.3801 MAATMIGSAFLSATVQTLVQKLASKEFLDYITNTKLDLSLLKQIRLTLLTLQPLLDAAEEKQINIPSVKDWLDGLKDAVYDAEDLLNQISYDSLRCQMENTQPAIKTKQVWNFLSSPFKNIYGEINSQMKDMCETLKLFAQHKDIVSLQIKSVRVSHRRPSSSMVNESVMVGRKDDKEIIMNMLVSENGTRKKNIEVVAILGMGGVGKTTLAQLAYNDEKVEDHFDLKAWACVSEDFDVFRVTKTLLESVTSKTWETNNLDFLRVELKRNLRDRRFFVVLDDLWNDSYIDWDELVSPLISGKTGSRVIITTRQEKVAINAHTFPIHKLDPLSDEESWSLLSKHAFGGTEFCETKCRNLEAIGRKIARRCGGLPIAAKTLGGLLRSKLDTKEWIEVLNNDIWKLQNDNIVPALLLSYQYLSSQLKSCFSYCSIFPKDYPLDRKQLVLLWMAEGFLDHSQDDKTMEEVGDECFTELISRSLIQQLHNDSSGQTFVLHDLVNDLATAVSGKSCYRLEFGAKSYENVRYLSYNQERCDTFKKFKNFYQFKCLRSFIAIDFRGWKEYYLSRKVVDDLLPTFARLRVLSLSRYVNITMLPDTIDNLVQLRYLDLSLTNITSLPDTICNLYYLQTLILSWCSKLKELPEHIGKLINLRHLYIDMTSIIEMPKQIAKLENLQTLTVFVVGKKNIGLSVKELGMFPMLRGKLFIKNLQNVIDVMEASDTNLKRKEHIEELTLQWGEEVDDSLKVKEVLSKLQPSPTLKKLSIDLYGGTSFPSWLGDPSFSNMVSLCIDNCVNCTTLPPLGQLPSLKDLKIARMTILKTIGQEFYGMVAGGSNSPFQPFSSLEKLVIEEMSNLEEWYPFQGSIFPFLRLKNLELFYCPKLRGHLPSQLPSIEKIEMDGCDHLLATPPTQHWLSSIKKIYIVGDSNSESNTEWTECSLLGSDCPCLLQEIDITSCHMIKSVPKMVINSTCLQQLTLHGISSLTAFPTNGLPSSLQSLDIGECENLTFLPPETWSNYTSLVSLHLDNSCNSLTSFPLNCFPMLQNLSISKCRSLESIFISKTSSCSLSTLKSFYVNDCETLRSLPQRMDTLTALENIFLCNLPNLNLSLCEGAFLPPSLQSIAVDSVRVTKPVTEWGLHGLTALSLLYIKGDDIVNMLLKESLLPISLVNLEITNLSEMKFLEGNGLRHLSSLEGLYLYHCSELVSVSEKIFPSSLKILYFEDCPKLESLPEDSLPPSLEHLFIRDCPLLEERYKRKEHWSKIAHIPVIRINDQVTI 1275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06893 1275 PANTHER DISEASE RESISTANCE PROTEIN RP 55 893 IPR044974 GO:0006952
Vivi3g06893 1275 Gene3D - 14 131 - -
Vivi3g06893 1275 FunFam Probable disease resistance protein At1g61300 153 322 - -
Vivi3g06893 1275 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 430 IPR027417 -
Vivi3g06893 1275 SUPERFAMILY L domain-like 494 927 - -
Vivi3g06893 1275 Gene3D Ribonuclease Inhibitor 534 711 IPR032675 -
Vivi3g06893 1275 Gene3D Ribonuclease Inhibitor 927 1099 IPR032675 -
Vivi3g06893 1275 Gene3D - 421 504 IPR036388 -
Vivi3g06893 1275 Gene3D - 330 420 IPR042197 -
Vivi3g06893 1275 Gene3D - 153 323 IPR027417 -
Vivi3g06893 1275 FunFam Probable disease resistance protein At1g63360 416 504 - -
Vivi3g06893 1275 Pfam Rx N-terminal domain 10 101 IPR041118 -
Vivi3g06893 1275 SUPERFAMILY L domain-like 943 1250 - -
Vivi3g06893 1275 PRINTS Disease resistance protein signature 270 284 - -
Vivi3g06893 1275 PRINTS Disease resistance protein signature 197 212 - -
Vivi3g06893 1275 PRINTS Disease resistance protein signature 621 637 - -
Vivi3g06893 1275 PRINTS Disease resistance protein signature 369 383 - -
Vivi3g06893 1275 Gene3D Ribonuclease Inhibitor 1100 1260 IPR032675 -
Vivi3g06893 1275 Gene3D Ribonuclease Inhibitor 712 896 IPR032675 -
Vivi3g06893 1275 Pfam NB-ARC domain 190 398 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06893 Vivi-Chr3 195807174 195812544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06893 587 685 WRKY Transcription Factor Family AT4G12020 36.893 5.54e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06893 - - tpra:123915821 1476.84