Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06891 ATGGCTGCAATAGGAAGTGCTTTCCTCTCTGCAACTTTAAGGCTAACACTACTCACTCTTCAACCTGTGCTAGATGCTGCCGAGGAGAAGCAGATTAGCACTCCTTCTGTCAAAGACTGGCTTGATGGCTTGAAAGATGTTGTCTATGATGCAGAAGATCTGCTTAACCAAATTAGCTATGATTCCCTTCGATGCAAGATGGAGAACACGCAACCTGCAAGCAAAACTAATCAGGTGTGGAACTTCCTTTCTTCTCCTTTTAAAAACATCTATGGAGAGATCAATTCCCAGATGAAAGATATGTGTGAAACCCTCAAACTTTTTGCTGATAAGAAAGATATACTTAGTTTGCAAACTAAAACTATCAGAGTTTCTCATAGAACACCTTCAAATCCTATGTTCGATGAATCTGTCATGGTTGGTAGGAAAGATGACCTAGAGAAAGTAATAAACATGTTGCTATCAGAAAGCAATACTAATATGGGCATAGTTGCAATTGTAGGCATGGGAGGCCTCGGAAAAACAACACTTGCACAACTTGTTTGTAATGATGAAAAAGTTCAAAACCACTTTGATCTCACAGCATGGGCTTGTGTATCAGAGGATTTTGATATCCTTAATGTAACCAAAACTCTCCTTGAATCTGTCACTAAAACACCATCAGGAACCGACAATCTTGATTTACTTCGAGTTGACTTAAAGAAACATTTAAAAGACAGGAGATTTTTGATTGTGTTGGATGACTTATGGAATGACACTCGTCACGATTGGGAAGATCTTGTATCGCCGTTGATTTATGGAAAACATGGAAGCAGGGTGATCATCACAACACGCCACAAAAAAGTGGCAGATGCTGCACGCACATTTCCTATTTTTGAGTTAGATCCTCTATCAGAAGAAGACATTTGGTCTTTACTCTCCAAACGTGCATTTGGAAGTGGTGACTTTTCTGAAACTCAATGCCGAAACCTAGAACCAATTGGCAGGAAGATTGCAAAAAAGTGTGGTGGATTGCCAATAGCTGCGAAATCACTTGGAGGACTGTTGCGTTCAAAAGTAGATACTGAAGAGTGGATTGAAGTTCTGAACAACGACATATGGAACTTAAAGGATGATAATATTCTGCCTGCATTGCGCCTGAGTTATCAATACCTTTCCTCTTAA 1164 0.3969 MAAIGSAFLSATLRLTLLTLQPVLDAAEEKQISTPSVKDWLDGLKDVVYDAEDLLNQISYDSLRCKMENTQPASKTNQVWNFLSSPFKNIYGEINSQMKDMCETLKLFADKKDILSLQTKTIRVSHRTPSNPMFDESVMVGRKDDLEKVINMLLSESNTNMGIVAIVGMGGLGKTTLAQLVCNDEKVQNHFDLTAWACVSEDFDILNVTKTLLESVTKTPSGTDNLDLLRVDLKKHLKDRRFLIVLDDLWNDTRHDWEDLVSPLIYGKHGSRVIITTRHKKVADAARTFPIFELDPLSEEDIWSLLSKRAFGSGDFSETQCRNLEPIGRKIAKKCGGLPIAAKSLGGLLRSKVDTEEWIEVLNNDIWNLKDDNILPALRLSYQYLSS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06891 387 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 386 IPR027417 -
Vivi3g06891 387 Gene3D - 296 386 IPR042197 -
Vivi3g06891 387 Gene3D - 119 289 IPR027417 -
Vivi3g06891 387 PRINTS Disease resistance protein signature 236 250 - -
Vivi3g06891 387 PRINTS Disease resistance protein signature 163 178 - -
Vivi3g06891 387 PRINTS Disease resistance protein signature 335 349 - -
Vivi3g06891 387 Gene3D - 10 106 - -
Vivi3g06891 387 Pfam NB-ARC domain 143 363 IPR002182 GO:0043531
Vivi3g06891 387 PANTHER DISEASE RESISTANCE PROTEIN RP 40 387 IPR044974 GO:0006952
Vivi3g06891 387 FunFam Probable disease resistance protein At1g61300 122 288 - -
Vivi3g06891 387 Pfam Rx N-terminal domain 13 73 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06891 Vivi-Chr3 195573712 195574962 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06891 145 352 WRKY Transcription Factor Family AT5G45050 28.774 2.25e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06891 - - vvo:131659659 759.599