Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06851 ATGGCTTCCAAACGTCTTTTGGATGATTCTGATCAAGACAAGCACAAACGTATCAGAACTACAACAACACCTTCTTTTGCTTCTGTAATAGGAGAAGTTGTTATGGTGAAAAACATGCAAAACCTTTTCTCTGGCTTGGAACCATTACTTAGAAGAGTGGTGAACGAAGAAGTGGAACGAGCAATGAGACAATGTTATCCATCGCGATCGATGATAACAAAGTCACCTTCATTGAGACTTCAAGCAATGGAACATCCATCAAGTTTTCAATTCATTTTCAAAAAGAAGCTTCCTCTTTCAATATTCACGGGTAGTAGATTACTAGACATGGATGAAAACTCAATCAATGTCATTCTTGTTGACAAAAGCAATGGCCAAAATGTTCCTACAAGTCTACCTCACCCAATCAAGATAGAAATTGTAGTTCTTGATGGAGATTTTCCATCTAGTGAAAAGGAATCATCATGGACTAGTGAAGAATTCAATAGTAATATTGTGAAAGAAAGAAATGGGAAAAGGCCATTGCTTACGGGAGAATTGAATCTTACTATGAGAGACGGAATTGCACCAATCGGAGATATTGAATTCACCGATAATTCAAGTTGGATTCGTAGCAGAAAGTTTAGACTTGGTGTTAGAGTTGCTCATGGGAGTAATCAAAATGTTCGAATCCGCGAAGGCATGACCGAACCCTTTGTTGTTAAGGATCATCGCGGAGAATTGTACAAGAAGCACCATCCACCAAGTCTAAACGATGAAGTATGGCGTTTAGAGAAAATTGGAAAAGACGGAGCTTTTCACAAAAAATTGACTGCAGCAAAGATCACGACAGTTCAACAGTTTCTCAAATTATCTGTAGTTGATCCTCAAAGACTCAGAAAGATATTAGGCGTTGCAATGTCAGAGAAAATGTGGGATGTAACAATGAAACATGCAAAGACTTGTGTCATGGGAAGCAAACTATATGTGTACCGTGGGCCCCAGTTTACCATTTATCTGAATGCCATATGTCAAATGGTTAGAGCTTATACCATGAATGGCCAAACCATTCCCAACAGAGACATCAACAAGAGCTACATACAAAACTATGTGAGAGAAGCATATAATAGATGGAATGAGTTGGAGGAAATTGATGAAGCTTTGAATGAGAGTTTGGAACCAAGTCAATTTCAAAACAATAGTAATCATGGAGCATCAGTCATAGGATATGATCAGCATCAGTATTTTGGTGATAAATGTATAGAGGGTGGAAATTATTTAGGAAACAATAATGCTAATAATAATAATAATAATGCAGAAATAGGGTGTATAGAATGGTCACCATTTGCCACGTCACCATTCATGAATGGAATGCCTTATAGCTTCTCAGAGTCACAATCAGATGGTGGTGATATAACACCTTCAAGTTCAGGACCAGTCATTGGTGGAGCCTCCTCTTCAAGATGGTAA 1449 0.381 MASKRLLDDSDQDKHKRIRTTTTPSFASVIGEVVMVKNMQNLFSGLEPLLRRVVNEEVERAMRQCYPSRSMITKSPSLRLQAMEHPSSFQFIFKKKLPLSIFTGSRLLDMDENSINVILVDKSNGQNVPTSLPHPIKIEIVVLDGDFPSSEKESSWTSEEFNSNIVKERNGKRPLLTGELNLTMRDGIAPIGDIEFTDNSSWIRSRKFRLGVRVAHGSNQNVRIREGMTEPFVVKDHRGELYKKHHPPSLNDEVWRLEKIGKDGAFHKKLTAAKITTVQQFLKLSVVDPQRLRKILGVAMSEKMWDVTMKHAKTCVMGSKLYVYRGPQFTIYLNAICQMVRAYTMNGQTIPNRDINKSYIQNYVREAYNRWNELEEIDEALNESLEPSQFQNNSNHGASVIGYDQHQYFGDKCIEGGNYLGNNNANNNNNNAEIGCIEWSPFATSPFMNGMPYSFSESQSDGGDITPSSSGPVIGGASSSRW 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06851 482 MobiDBLite consensus disorder prediction 453 482 - -
Vivi3g06851 482 PANTHER OS02G0177800 PROTEIN 1 457 IPR012416 GO:0005516
Vivi3g06851 482 Pfam Calmodulin binding protein C-terminal domain 320 377 IPR046829 -
Vivi3g06851 482 Pfam Calmodulin binding protein-like N-terminal domain 90 237 IPR046831 -
Vivi3g06851 482 Pfam Calmodulin binding protein central domain 249 315 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06851 Vivi-Chr3 193797546 193800157 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06851 3 378 Calmodulin-binding Proteins AT5G57580 49.096 1.55e-115 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06851 - - gmx:100802257 600.897