Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06822 ATGGCAGGATTGATGGTTGCTGGAGCATTTCTTACACCGGTCATCCAAGTCATTGTTGAAAGTGTTGCCTCAAGAGATTACAAAGACCTCTTCAATAAACGGTTGGTGAATAAACTTAAAATTAAATTGAATTCAATCCAGAAAGTGTTGGATGATGCAGAGACAAAACAGTACCATGACGAAAGGGTGAGGTTTTGGCTTGATAATCTAAAGCATGTGGTATATGAAGTAGAACAACTGTTGGATGAGATTGCTACTAGTGCCCAAAGGAAGTCCAAGGTTCATCGCTTCCGTTTAGTTGGCCGATTTAAATCTAAGATCAAGATTTATTTCTTTCTTTTAGCTGGTCGATTTAAATCTAGGATCAATGATTTGCTAGACAACCTAAAAGATCTATTAGACGAAAAGGATTTGTTGGGTTTGAAAGAAGGAATATTTGCTCGTAATGAATTTTCAGAAAGAGTGCCAACGACGTCTTTGGTGGATGAATCTAGCAAATATGGTAGACAGGGTGAAAAAGAGGAAATTATCAGTTTCTTACTTTTAAACAATAATAGTAGTAGCACCAGCAACCAAGCACTAATAATCAGCATAGTTGGTCTTGGTGGGATAGGTAAGACCACCCTTGCTCAGCTTGTCTACAATGACCACAGGGTGCAAAAGAACTTTGATCTTAAAGCTTGGGTCTATGTTTCTGAATCATTTGATGTTATTAGACTCACTAAAGCAATTCTCGAGTCATTTGGTTCTTCACCAAACACTGAAAACCTAGATCTACTCCAATGTCAATTGCAGGAAAAGATAACCGGAAAAAAATGTTTGCTTGTTCTAGATGATATCAGGAAAGTAGACTGGGAAAGTTGTGAGAAGTTACTAAGTTTCTTTAATGAAGGATCTTCTGGAAGTAATATTATTGTGACAACACGAAATAAGGAGAATGCATTAGCCATGGAATCCAAGTTATTTGAATTAGTTCAATTGGGGGAGAGTGATTCTTGGAGTTTATTTGAGAGACATGCTTTTCCCAACAAAAAAGGGAGTGAATATCCAGATCTTGAACCAATTGGAAAGAGGATTGTAGGCAAGTGTGGAGGGCTGCCATTAGCCGTGATAACTATGGGGAAACTCTTGAGAGCGAAATTCTCTCAAAGTGAATGGATTGAAATATTGGAGGATGATATGTGGGGTTTATCTGAGAAAGACACTGGCATAAATCCAGTATTGAGATTGGGTTACCATAATCTTCCTTCCAATTTGAAGCCTTGTTTTGCATACTGCTCAATATTTCCCAAGGGTTATAAGTTTGACAAGAACAAGTTAATCAAAATGTGGATGGCAAATGGTTTGCTGAATTCCTACAAAAGTGACAAAAGTAAAGAAAAGTTGGGTAGTGAGTTATTCAATGTTCTTGAGTCAATTTCATTTTTCCAAAAATCACTAGATTTTGATGGTGGTTTTACCATGCATGATCTTGTAAATGACTTGGCAAAATCAATGTCTCGAGAGTTTTGCTTACAAGTAGAGGATGATAAGAATGTAAATCACATTTCTAAATGGACACGCCACATTTGGTTCTCTTTTGATTCGGAAGATGCTGATAGAATATTAAAACACACTTATAGAAGTAAGGGATTACACAGCTTGTTGATAGAACCAAAAAGTTACAAATGGACCGAGATAAGCAACAATGTGCAATGTGATATATTTTCCAAACTAAAATATTTGCAGATGTTGTCATTTCTTGGTAGTAGGTCTTTACATACAGAGCTAGAGCTAGAGCTAGCAGATGAGATAGGCAATTTAAAGTTTTTGCGCTATCTAGATGTGTCTTGGACAAGTATTGTAAGGTTGCCTAATTCTATTTGTAAGCTTTACAATTTAGAGACATTGATATTGGAAAAGTGTTATAATTTGACTGAACTTCCTATAAATTTTTCCAAACTTGACCGTTTACGCCATCTTAATCTAGAAGGGTCTGCAATAGAGAAGATGCCAAAGAACATAAGGAAACTAACCCATCTACAAACATTAACTAACTTTATTGTGGGAGAGCCAAGTGGATCTGATATTGAGGAGTTAGAAAGTCTCAATCTTCTTCAAGGAAAACTTTGTCTTTCAGGATTGAACAATGTCACTGATCCAACACATGCCCTAAAGAGCCGTTTGCAAGATAAGAAGTATTTAGAAGAAATACATATGATATTTGATGGTTCAGTAGTGGAAAGCAATGTGTCTGTCTTGGATGCCCTTCAACCAAATAACAATCTGAAGAGGCTCACTATTGAGAACTACAATGGAAATATGTTTCCAAATTGGCTAAGTGGTTTTGGTTTACCCAACTTAATATCTCTTAAACTGCACAACTGTAATGGAATAAAGATCTTTGGCAATGACTCAACAAATGTTCCGTTCAAGTTTCTTGAAGTTTTGGAATTTGACTGCATGTCGGAATGGGAGGAATGGTTATGTATTGAAGGGTTTCCTCTGCTTAAAGAGCTTTACATAAGAGACTGTCCCAAATTGAAAAAAGCACTCCCTCCACACCTTCCTTCATTACATAGATTGGTGATTAGTGGTTGCAAAATGCTGGACGTGTCAATTCTCAATTTTGATGAAATCAGAGTGTTGGATCTACGGAATTGTAAGCGGATTTTGATAAATGAGTTGTCATCCAGCTTGAAAAGATTTGTCCTTCGTGAAAATCAGTATGTTGAGTTCTCCATGGATCATTTAATCAACAATCCCTTTCTGGAAGTGTTGTCGTTGGATTTCAAGGGCTTTGTAGAATGTCCCTCTTTAGATTTGTGCTGCTATAATTCTCTTGGTCGACTTACAATAAGAGGATGGCAGTCCTCCTCATCGCCTTTTTGCCTACCCTTGTTCACCAATCTATGTATTCTAAAGTTGTTTGATTGTCCAAGGCTGGAGTCTTTTCTTATTGGAGGTTTGCCTTCCAAGTTGTGGTCTCTTCTAATACACAATTGCCCAAAATTAATTGCTTCTAGAGAGGAGTGGGGTTTATTCCAACTCAATTCTTTGACTCATTTCATGGTTAGTGATGATTTTGAAAACCTGGAGTTGTTCCCTGAGCAGAATCTACTGCCACCAACTCTCACGAATCTCCATTTGGGCAAATGTTCAAAGCTAAGAATATTGAACTACAAGGGATTTCTCCACCTCAAATCTCTTAGTAGTATATGGATTGACAACTGCCCTAGTCTTGAGAGTTTGCCGGAGGAAGGTCTACCCAACTCCCTTTATAATTTGTACATTGAAGATTGTCCATTAGTTAAGGAGAAGTACAAAAAGGAGGGAGGAGAGCGTTGGCATACAATTAGTCACATCCCTAGAGTGTTCATTGACTATATTCGGCAGGAATAG 3381 0.3739 MAGLMVAGAFLTPVIQVIVESVASRDYKDLFNKRLVNKLKIKLNSIQKVLDDAETKQYHDERVRFWLDNLKHVVYEVEQLLDEIATSAQRKSKVHRFRLVGRFKSKIKIYFFLLAGRFKSRINDLLDNLKDLLDEKDLLGLKEGIFARNEFSERVPTTSLVDESSKYGRQGEKEEIISFLLLNNNSSSTSNQALIISIVGLGGIGKTTLAQLVYNDHRVQKNFDLKAWVYVSESFDVIRLTKAILESFGSSPNTENLDLLQCQLQEKITGKKCLLVLDDIRKVDWESCEKLLSFFNEGSSGSNIIVTTRNKENALAMESKLFELVQLGESDSWSLFERHAFPNKKGSEYPDLEPIGKRIVGKCGGLPLAVITMGKLLRAKFSQSEWIEILEDDMWGLSEKDTGINPVLRLGYHNLPSNLKPCFAYCSIFPKGYKFDKNKLIKMWMANGLLNSYKSDKSKEKLGSELFNVLESISFFQKSLDFDGGFTMHDLVNDLAKSMSREFCLQVEDDKNVNHISKWTRHIWFSFDSEDADRILKHTYRSKGLHSLLIEPKSYKWTEISNNVQCDIFSKLKYLQMLSFLGSRSLHTELELELADEIGNLKFLRYLDVSWTSIVRLPNSICKLYNLETLILEKCYNLTELPINFSKLDRLRHLNLEGSAIEKMPKNIRKLTHLQTLTNFIVGEPSGSDIEELESLNLLQGKLCLSGLNNVTDPTHALKSRLQDKKYLEEIHMIFDGSVVESNVSVLDALQPNNNLKRLTIENYNGNMFPNWLSGFGLPNLISLKLHNCNGIKIFGNDSTNVPFKFLEVLEFDCMSEWEEWLCIEGFPLLKELYIRDCPKLKKALPPHLPSLHRLVISGCKMLDVSILNFDEIRVLDLRNCKRILINELSSSLKRFVLRENQYVEFSMDHLINNPFLEVLSLDFKGFVECPSLDLCCYNSLGRLTIRGWQSSSSPFCLPLFTNLCILKLFDCPRLESFLIGGLPSKLWSLLIHNCPKLIASREEWGLFQLNSLTHFMVSDDFENLELFPEQNLLPPTLTNLHLGKCSKLRILNYKGFLHLKSLSSIWIDNCPSLESLPEEGLPNSLYNLYIEDCPLVKEKYKKEGGERWHTISHIPRVFIDYIRQE 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06822 1126 Pfam NB-ARC domain 188 391 IPR002182 GO:0043531
Vivi3g06822 1126 Gene3D - 412 499 IPR036388 -
Vivi3g06822 1126 Coils Coil 36 56 - -
Vivi3g06822 1126 Coils Coil 115 142 - -
Vivi3g06822 1126 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 426 IPR027417 -
Vivi3g06822 1126 PRINTS Disease resistance protein signature 267 281 - -
Vivi3g06822 1126 PRINTS Disease resistance protein signature 868 884 - -
Vivi3g06822 1126 PRINTS Disease resistance protein signature 363 377 - -
Vivi3g06822 1126 PRINTS Disease resistance protein signature 195 210 - -
Vivi3g06822 1126 Gene3D - 146 323 IPR027417 -
Vivi3g06822 1126 Gene3D Ribonuclease Inhibitor 1003 1104 IPR032675 -
Vivi3g06822 1126 Gene3D - 22 118 - -
Vivi3g06822 1126 Pfam Rx N-terminal domain 11 94 IPR041118 -
Vivi3g06822 1126 PANTHER DISEASE RESISTANCE PROTEIN RP 36 841 IPR044974 GO:0006952
Vivi3g06822 1126 SUPERFAMILY L domain-like 487 880 - -
Vivi3g06822 1126 SUPERFAMILY L domain-like 849 1100 - -
Vivi3g06822 1126 Gene3D Ribonuclease Inhibitor 536 908 IPR032675 -
Vivi3g06822 1126 Gene3D - 326 411 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06822 Vivi-Chr3 192503549 192518648 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06822 196 380 WRKY Transcription Factor Family AT5G45050 27.083 2.96e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06822 - - vvo:131593170 1392.1