Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06815 ATGGCAGGGCTGATGGTTGCAGGAGCATTTCTTACACCTGTCATCCAAGTTATTGTTGAGAGGGTTGCCTCAGGAGATTACAAAGACATCTTCAAGAAACGAATGGTGAATAAACTCGAAATCACTTTGAATTCTATCAATCAAGTGTTGGATGATGGAGAGACAAAGCAGTACCAGAATCCAAATGTCAGGATTTGGCTTGATGATATAAAACATGAGGTATGTGAAGTAGAACAGCTGTTGGATGAGATTGCTACAAGTGCACAACGAAAGAGCAAGGTTAAACACTTCTTTTCATCTCTGACTAATCAGTTTGAATCTAGGATGAAAGACTCGCTAGATAAGCTAGAACATCTTTTAAAGCAAAATGATGTGTTGGGATTGAAAGAAGGAACATCTGCTCGTAATGGACTTGAAGTCGGTCCAGAATCTTCAAAAAGAGTGCCAACGACGTCTTTGGTGGATGAATCTAGAATACTTGGTAGGAATGATGATAAAGAGGAAATTATTGATTTCTTACTTTTAGACAATGGTAGTAGTTGCAACCATGCACCAATAATCAGCATAGTTGGTCTTGGTGGGATGGGTAAGACCACCCTTGCTCGGCTCGTCTACAATGACGACAAGGTGCAAAGCAACTTTGAACTTAAAGCTTGGATCTATATTTCAAATCCATTTGATATTTTTGGGCTCACTAAAGAAATTCTCGAGCAATTTAAATCTCCAACAGATAGTGAAAGCTTGGAAATACTCCAACATCAATTGCAACAGAAAGTAATGGGAAAGAAATATTTGCTTGTTCTAGATGATATTTGGAAAGCTAATGAGAAAAGTTGGGAGCAGTTACTAATTCCCTTTAATAAAGGATCTCCTGGAAGTAAGATGATCGTGACAACACGAAGTAAGGATGATGCATCAGCCATGGAATCTGCAAAGTTAGTTGAATTAGAACAACTGGAGGAGAGTGATTGTTGGAGTTTATTTGTGACACATGCTTTTCACGACAGAAACGCGAGTGATTATCCAGATCTTGAACCAATTGGAAAGATGATTGTAGACAAGTGTGGAGGGTTGCCATTAGCTGTTAAAACAATGGGGAACCTCTTGAGAAAAAAATTCTCTAAAAGTGAATGGGAGAAAATATTGAAGACTGATATGTGGCGTTTATCAGAGAGAGACAGCAACATAAATCCAGTATTGAGACTGAGTTACCATAATCTTCCTTCAAATTCGAAGCGTTGTTTTGCATATTGTTCCATATTTCCCAAGGGTTATGAGTTTGACAAGAATAAGTTAATCAAAATGTGGATGGCAAATGGTTTGCTGAATTCCTACAAAAGTAACAAAAGTAAAGAAGAGTTGGGTAGTGGGTTATTTGATGATCTTGAGTCAATTTCATTTTTCCAAGAATCACTATATGTACCTGGACTTTTTGTCATGCATGATCTTGTCAATGACTTGGCAAAGTCAGAGTCTAGAGAATTTTGCTTACAAGTGAATGGTGATACGGGGCAAGATATATCTGAAAGGACACGCCACATTTGGTGTTCTCTTGATTTGAAAGCCGGCGATGGGATATTAAAGCACATTTATAGAGCTAAGGGATTACACAGCTTGTTGGTAGAATCACCAACGTATGGTGGCGAATGCTTCATGATAAGCAACAATATGCAATGTGATATGTTTTCAAAATTAAAATATTTGCGGATGTTATCATTTAGTGATTACGGAACTCCATACGGAGAGCTAGAACTAGCAGATGAGATAGGCAATTTAAATCTTTTGCGCTATCTAGACCTGACTTGGACAGATATTAAAAGGTTACCCGACTCTATCTGTAAGCTTTATAACTTAGAGAGACTGGAATTGAAAAACTGTGATAATTTGACTGAATTGCCTTTAGACTTTTACAAACTTGACGGTTTACGCCATCTTAATCTGGAAGGAACTGCAATAAAGAAGATGCCAAAGCAGATAAGGAAACTTAACCATCTACAAACGCTGACTAATTTTGTTGTGGGAGAGTCGAGTGGGTCTGATATTGAGGAGTTAGAAAGTCTCAATCTTCTTCAAGGAAAAATTAGTCTTTCAGGATTGAACAATGTCACTGATCCAACACATGCCGTAAAGAGCCGTTTGCAAGATAAGAAGTTTTTAGAAAAAATACATATGATATTTGATGGTTCAATAGTGGAAAGCAATGTGTCTGTCTTGGATGCCCTTCAACCAAATATCAATCTGAAGAGGCTCACCATTAAGAACTACAATGGCAATATGTTTCCAACTTGGATAAGGGGGTGTGATTTACCCAATTTAATATCTCTTAAACTGAAGAACTGTAATGGAATAAAGATCTTTGGCAATAACTCAACAAATGTTCCATTCAAGTTCCTTGAAGTTTTGGAATTTGACTGTTTGTCTGAATGGGAGGAATGGGTATGTATTGAAGGGTTTCCTCGGCTTAAAGAGATTTCTATAAATGATTGTCCCAAATTGAAAAGGGTATCACTGCCTCAACATCTTCCTTTATTACAGAAATTGTTTATAGGTGGGTGCAAAATGGTGGACGTGTCAATTCTCAATTATGATAAAATCATAGTGTTGGATCTACGGAAATATGAGCGGATTATGATAAATGAGTTGTCATCAAGCTTGAAAAGGTTTGTCCTTAGTGAAAATCAGTATGTTGAGTTCTCCATGGATCATTTAATCAACAATCCCTTTCTGGGAGTGTTGTGGTTGGATTTTAAAGACTTGGTAGAATGTCCCTCGTTAGATTTGTGTTATAATTCTCTTTGGCAACTTTCAATAAGAGGATGGCAGTCCCCCTCGTTGCCTATTTCACTACACTTGTTCACCCATCTAAGTTCTCTAAAGTTGCTGGATTGTCCAAGGCTGGAGTCTTTTCTTATTGGAGGTTTGGCTTCCGAGTTGTGGTCCCTTGATATATTCAATTGCCCAAAATTAATTGCTTCCAGAGTGGAGTGGGGTTTATTCCAACTCAATTCTCTATATTTTTTCACTGTTAGTGATGATTTTGAAAACGTGGAGTCCTTCCCCGAGCAGAATCTACTGCCACCAACTCTAAAGTTTCTTAAATTGGATAAATGTTCAAAGCTAAGAATATTGAACTACAAGGGATTTCTCCACCTCAAATCTCTTGGTAATATATGGATTTGCAACTGCCCTAGCCTTGAGAGTTTGCCGGAGGAGGGTCTACCCAACTCCCTTTCTTGTTTGTTCATTGAAAACTGTCCATTACTTTCAGAGAAGTACAAAAAGGAGGGAGGAGAGCGTTGGCATACAATTAGTCATATCCCTACTGTGCGGATTGACGGTATTCATCAGCATTAG 3354 0.3801 MAGLMVAGAFLTPVIQVIVERVASGDYKDIFKKRMVNKLEITLNSINQVLDDGETKQYQNPNVRIWLDDIKHEVCEVEQLLDEIATSAQRKSKVKHFFSSLTNQFESRMKDSLDKLEHLLKQNDVLGLKEGTSARNGLEVGPESSKRVPTTSLVDESRILGRNDDKEEIIDFLLLDNGSSCNHAPIISIVGLGGMGKTTLARLVYNDDKVQSNFELKAWIYISNPFDIFGLTKEILEQFKSPTDSESLEILQHQLQQKVMGKKYLLVLDDIWKANEKSWEQLLIPFNKGSPGSKMIVTTRSKDDASAMESAKLVELEQLEESDCWSLFVTHAFHDRNASDYPDLEPIGKMIVDKCGGLPLAVKTMGNLLRKKFSKSEWEKILKTDMWRLSERDSNINPVLRLSYHNLPSNSKRCFAYCSIFPKGYEFDKNKLIKMWMANGLLNSYKSNKSKEELGSGLFDDLESISFFQESLYVPGLFVMHDLVNDLAKSESREFCLQVNGDTGQDISERTRHIWCSLDLKAGDGILKHIYRAKGLHSLLVESPTYGGECFMISNNMQCDMFSKLKYLRMLSFSDYGTPYGELELADEIGNLNLLRYLDLTWTDIKRLPDSICKLYNLERLELKNCDNLTELPLDFYKLDGLRHLNLEGTAIKKMPKQIRKLNHLQTLTNFVVGESSGSDIEELESLNLLQGKISLSGLNNVTDPTHAVKSRLQDKKFLEKIHMIFDGSIVESNVSVLDALQPNINLKRLTIKNYNGNMFPTWIRGCDLPNLISLKLKNCNGIKIFGNNSTNVPFKFLEVLEFDCLSEWEEWVCIEGFPRLKEISINDCPKLKRVSLPQHLPLLQKLFIGGCKMVDVSILNYDKIIVLDLRKYERIMINELSSSLKRFVLSENQYVEFSMDHLINNPFLGVLWLDFKDLVECPSLDLCYNSLWQLSIRGWQSPSLPISLHLFTHLSSLKLLDCPRLESFLIGGLASELWSLDIFNCPKLIASRVEWGLFQLNSLYFFTVSDDFENVESFPEQNLLPPTLKFLKLDKCSKLRILNYKGFLHLKSLGNIWICNCPSLESLPEEGLPNSLSCLFIENCPLLSEKYKKEGGERWHTISHIPTVRIDGIHQH 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06815 1117 Gene3D - 318 403 IPR042197 -
Vivi3g06815 1117 SUPERFAMILY L domain-like 479 858 - -
Vivi3g06815 1117 Gene3D - 143 315 IPR027417 -
Vivi3g06815 1117 SUPERFAMILY L domain-like 795 1102 - -
Vivi3g06815 1117 PRINTS Disease resistance protein signature 258 272 - -
Vivi3g06815 1117 PRINTS Disease resistance protein signature 186 201 - -
Vivi3g06815 1117 PRINTS Disease resistance protein signature 355 369 - -
Vivi3g06815 1117 PRINTS Disease resistance protein signature 613 629 - -
Vivi3g06815 1117 FunFam Probable disease resistance protein At1g61300 143 312 - -
Vivi3g06815 1117 Pfam Rx N-terminal domain 11 93 IPR041118 -
Vivi3g06815 1117 Gene3D - 404 492 IPR036388 -
Vivi3g06815 1117 Gene3D - 30 118 - -
Vivi3g06815 1117 Pfam NB-ARC domain 164 384 IPR002182 GO:0043531
Vivi3g06815 1117 Gene3D Ribonuclease Inhibitor 879 1104 IPR032675 -
Vivi3g06815 1117 Gene3D Ribonuclease Inhibitor 552 878 IPR032675 -
Vivi3g06815 1117 PANTHER DISEASE RESISTANCE PROTEIN RP 36 832 IPR044974 GO:0006952
Vivi3g06815 1117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 418 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06815 Vivi-Chr3 192407870 192422030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06815 187 867 WRKY Transcription Factor Family AT5G45050 23.253 1.13e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06815 - - vvo:131659621 1689.47